RNA–Protein interactions for RNA: YDR192C

NUP42, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NUP42, Length 1,293 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP42YDR192C CLB4P24871 460 aa5.02□□□□□ -1.61
NUP42YDR192C SSH4P32343 579 aa5.02□□□□□ -1.61
NUP42YDR192C IME2P32581 645 aa5.02□□□□□ -1.61
NUP42YDR192C SDH8P38345 138 aa5.02□□□□□ -1.61
NUP42YDR192C NAB3P38996 802 aaKnown RBP RIP-Chip data5.02□□□□□ -1.61not detected
NUP42YDR192C PUG1P40100 303 aa5.02□□□□□ -1.61
NUP42YDR192C SMK1P41808 388 aa5.02□□□□□ -1.61
NUP42YDR192C COS12P53053 380 aa5.02□□□□□ -1.61
NUP42YDR192C YIP4P53093 235 aa5.02□□□□□ -1.61
NUP42YDR192C BUD17P53727 317 aa5.02□□□□□ -1.61
NUP42YDR192C ACS1Q01574 713 aa5.02□□□□□ -1.61
NUP42YDR192C GFD1Q04839 188 aaKnown RBP5.02□□□□□ -1.61
NUP42YDR192C GRX6Q12438 231 aa5.02□□□□□ -1.61
NUP42YDR192C CLC1P17891 233 aa5.01□□□□□ -1.61
NUP42YDR192C RPS7AP26786 190 aaKnown RBP5.01□□□□□ -1.61
NUP42YDR192C CNE1P27825 502 aa5.01□□□□□ -1.61
NUP42YDR192C EBP2P36049 427 aaKnown RBP5.01□□□□□ -1.61
NUP42YDR192C LNP1P38878 278 aa5.01□□□□□ -1.61
NUP42YDR192C PES4P39684 611 aa5.01□□□□□ -1.61
NUP42YDR192C RSM25P40496 264 aa5.01□□□□□ -1.61
NUP42YDR192C ARP5P53946 755 aa5.01□□□□□ -1.61
NUP42YDR192C RPS15Q01855 142 aaKnown RBP5.01□□□□□ -1.61
NUP42YDR192C ERO1Q03103 563 aa5.01□□□□□ -1.61
NUP42YDR192C FCP1Q03254 732 aa5.01□□□□□ -1.61
NUP42YDR192C CIA1Q05583 330 aa5.01□□□□□ -1.61
NUP42YDR192C AIM6Q07716 390 aa5.01□□□□□ -1.61
NUP42YDR192C CRT10Q08226 957 aa5.01□□□□□ -1.61
NUP42YDR192C TAH18Q12181 623 aa5.01□□□□□ -1.61
NUP42YDR192C MDM20Q12387 796 aaKnown RBP5.01□□□□□ -1.61
NUP42YDR192C POM152P39685 1337 aa5□□□□□ -1.61
NUP42YDR192C NUC1P08466 329 aa5□□□□□ -1.61
NUP42YDR192C RPL19AP0CX82 189 aaKnown RBP5□□□□□ -1.61
NUP42YDR192C RPL19BP0CX83 189 aaPredicted RBP5□□□□□ -1.61
NUP42YDR192C STE4P18851 423 aa5□□□□□ -1.61
NUP42YDR192C YCR061WP25639 631 aa5□□□□□ -1.61
NUP42YDR192C MGM1P32266 881 aa5□□□□□ -1.61
NUP42YDR192C RPT3P33298 428 aaKnown RBP5□□□□□ -1.61
NUP42YDR192C SKI2P35207 1287 aaKnown RBP RIP-Chip data5□□□□□ -1.61not detected
NUP42YDR192C AAP1P37898 856 aaKnown RBP5□□□□□ -1.61
NUP42YDR192C EXO84P38261 753 aa5□□□□□ -1.61
NUP42YDR192C STB5P38699 743 aa5□□□□□ -1.61
NUP42YDR192C PSF2P40359 213 aa5□□□□□ -1.61
NUP42YDR192C CCT7P42943 550 aaKnown RBP5□□□□□ -1.61
NUP42YDR192C IRC8P47046 822 aa5□□□□□ -1.61
NUP42YDR192C YML131WQ03102 365 aa5□□□□□ -1.61
NUP42YDR192C TRS130Q03660 1102 aa5□□□□□ -1.61
NUP42YDR192C SPN1Q06505 410 aaPredicted RBP5□□□□□ -1.61
NUP42YDR192C OPY2Q06810 360 aa5□□□□□ -1.61
NUP42YDR192C THI3Q07471 609 aa5□□□□□ -1.61
NUP42YDR192C NKP1Q12493 238 aa5□□□□□ -1.61
NUP42YDR192C RPN13O13563 156 aa4.99□□□□□ -1.61
NUP42YDR192C ADE3P07245 946 aaKnown RBP4.99□□□□□ -1.61
NUP42YDR192C GFA1P14742 717 aaKnown RBP4.99□□□□□ -1.61
NUP42YDR192C UBC1P21734 215 aaKnown RBP4.99□□□□□ -1.61
NUP42YDR192C KRE2P27809 442 aa4.99□□□□□ -1.61
NUP42YDR192C RAD16P31244 790 aa4.99□□□□□ -1.61
NUP42YDR192C UBS1P38290 277 aa4.99□□□□□ -1.61
NUP42YDR192C KAP123P40069 1113 aaKnown RBP4.99□□□□□ -1.61
NUP42YDR192C SKP2P42843 763 aa4.99□□□□□ -1.61
NUP42YDR192C STU2P46675 888 aa4.99□□□□□ -1.61
NUP42YDR192C HST1P53685 503 aa4.99□□□□□ -1.61
NUP42YDR192C GTR1Q00582 310 aa4.99□□□□□ -1.61
NUP42YDR192C VPS72Q03388 795 aa4.99□□□□□ -1.61
NUP42YDR192C TRS23Q03784 219 aa4.99□□□□□ -1.61
NUP42YDR192C CSR1Q06705 408 aaKnown RBP4.99□□□□□ -1.61
NUP42YDR192C AAC1P04710 309 aa4.98□□□□□ -1.61
NUP42YDR192C WHI2P12611 486 aa4.98□□□□□ -1.61
NUP42YDR192C PRE2P30656 287 aaKnown RBP4.98□□□□□ -1.61
NUP42YDR192C MUP3P38734 546 aa4.98□□□□□ -1.61
NUP42YDR192C UME6P39001 836 aa4.98□□□□□ -1.61
NUP42YDR192C HYR1P40581 163 aaKnown RBP4.98□□□□□ -1.61
NUP42YDR192C ERR3P42222 437 aa4.98□□□□□ -1.61
NUP42YDR192C BST1P43571 1029 aa4.98□□□□□ -1.61
NUP42YDR192C SAP4P53036 818 aa4.98□□□□□ -1.61
NUP42YDR192C GND2P53319 492 aa4.98□□□□□ -1.61
NUP42YDR192C ARC35P53731 342 aaKnown RBP4.98□□□□□ -1.61
NUP42YDR192C ESF2P53743 316 aaKnown RBP4.98□□□□□ -1.61
NUP42YDR192C TMN2Q04562 672 aa4.98□□□□□ -1.61
NUP42YDR192C CRF1Q04930 467 aa4.98□□□□□ -1.61
NUP42YDR192C YDL121CQ07541 149 aa4.98□□□□□ -1.61
NUP42YDR192C RIX7Q07844 837 aaKnown RBP4.98□□□□□ -1.61
NUP42YDR192C MRH1Q12117 320 aaPredicted RBP4.98□□□□□ -1.61
NUP42YDR192C ZPS1Q12512 249 aa4.98□□□□□ -1.61
NUP42YDR192C TPK2P06245 380 aa4.97□□□□□ -1.61
NUP42YDR192C PET122P10355 254 aa4.97□□□□□ -1.61
NUP42YDR192C NCP1P16603 691 aaKnown RBP4.97□□□□□ -1.61
NUP42YDR192C PDE1P22434 369 aa4.97□□□□□ -1.61
NUP42YDR192C RER1P25560 188 aa4.97□□□□□ -1.61
NUP42YDR192C PEP3P27801 918 aa4.97□□□□□ -1.61
NUP42YDR192C MSP1P28737 362 aa4.97□□□□□ -1.61
NUP42YDR192C ARP2P32381 391 aaKnown RBP4.97□□□□□ -1.61
NUP42YDR192C CDC5P32562 705 aa4.97□□□□□ -1.61
NUP42YDR192C MTH1P35198 433 aa4.97□□□□□ -1.61
NUP42YDR192C NUP120P35729 1037 aa4.97□□□□□ -1.61
NUP42YDR192C LAS21P40367 830 aa4.97□□□□□ -1.61
NUP42YDR192C YFH7P43591 353 aa4.97□□□□□ -1.61
NUP42YDR192C SLI1P53304 468 aa4.97□□□□□ -1.61
NUP42YDR192C COQ6P53318 479 aa4.97□□□□□ -1.61
NUP42YDR192C UBP16Q02863 499 aa4.97□□□□□ -1.61
NUP42YDR192C YMR018WQ04364 514 aa4.97□□□□□ -1.61
Retrieved 100 of 5,963 RNA–protein pairs in 664.7 ms