RNA–Protein interactions for RNA: YDR139C

RUB1, Transcript of Ubiquitin-like protein with similarity to mammalian NEDD8, yeastyeast

Gene RUB1, Length 234 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RUB1YDR139C EXO84P38261 753 aa3.98□□□□□ -1.77
RUB1YDR139C IFA38P38286 347 aa3.98□□□□□ -1.77
RUB1YDR139C JHD1P40034 492 aa3.98□□□□□ -1.77
RUB1YDR139C ASG1P40467 964 aa3.98□□□□□ -1.77
RUB1YDR139C CFD1P40558 293 aa3.98□□□□□ -1.77
RUB1YDR139C GLO1P50107 326 aa3.98□□□□□ -1.77
RUB1YDR139C ASE1P50275 885 aa3.98□□□□□ -1.77
RUB1YDR139C YGR021WP53212 290 aa3.98□□□□□ -1.77
RUB1YDR139C ADE16P54113 591 aaKnown RBP3.98□□□□□ -1.77
RUB1YDR139C SUI3P09064 285 aaKnown RBP3.97□□□□□ -1.77
RUB1YDR139C TY2A-LR1P0C2J4 438 aa3.97□□□□□ -1.77
RUB1YDR139C TY2A-FP0CX61 438 aa3.97□□□□□ -1.77
RUB1YDR139C TY2A-GR2P0CX62 438 aa3.97□□□□□ -1.77
RUB1YDR139C PFK2P16862 959 aaKnown RBP RIP-Chip data3.97□□□□□ -1.77not detected
RUB1YDR139C TY2A-CP25383 438 aa3.97□□□□□ -1.77
RUB1YDR139C ECM32P32644 1121 aaKnown RBP3.97□□□□□ -1.77
RUB1YDR139C GEX2P36173 615 aa3.97□□□□□ -1.77
RUB1YDR139C UME6P39001 836 aa3.97□□□□□ -1.77
RUB1YDR139C YIL024CP40543 189 aa3.97□□□□□ -1.77
RUB1YDR139C MNT3P40549 630 aa3.97□□□□□ -1.77
RUB1YDR139C CTF18P49956 741 aa3.97□□□□□ -1.77
RUB1YDR139C COG1P53079 417 aa3.97□□□□□ -1.77
RUB1YDR139C YPR003CP53394 754 aa3.97□□□□□ -1.77
RUB1YDR139C DCP2P53550 970 aaKnown RBP3.97□□□□□ -1.77
RUB1YDR139C TY2A-DR2Q03483 438 aa3.97□□□□□ -1.77
RUB1YDR139C TY2A-BQ12260 438 aa3.97□□□□□ -1.77
RUB1YDR139C TY2A-OR2Q12293 438 aa3.97□□□□□ -1.77
RUB1YDR139C TY2A-DR1Q12392 438 aa3.97□□□□□ -1.77
RUB1YDR139C TY2A-OR1Q12439 438 aa3.97□□□□□ -1.77
RUB1YDR139C TY2A-DR3Q99303 438 aa3.97□□□□□ -1.77
RUB1YDR139C PCT1P13259 424 aa3.96□□□□□ -1.78
RUB1YDR139C TEF4P36008 412 aaKnown RBP3.96□□□□□ -1.78
RUB1YDR139C ARN1P38731 627 aa3.96□□□□□ -1.78
RUB1YDR139C IST3P40565 148 aaPredicted RBP3.96□□□□□ -1.78
RUB1YDR139C CDC1P40986 491 aa3.96□□□□□ -1.78
RUB1YDR139C YJL107CP42947 387 aa3.96□□□□□ -1.78
RUB1YDR139C GTR1Q00582 310 aa3.96□□□□□ -1.78
RUB1YDR139C TFC6Q06339 672 aa3.96□□□□□ -1.78
RUB1YDR139C SWA2Q06677 668 aa3.96□□□□□ -1.78
RUB1YDR139C PFA4Q12006 378 aa3.96□□□□□ -1.78
RUB1YDR139C PCD1Q12524 340 aa3.96□□□□□ -1.78
RUB1YDR139C MRP2P10663 115 aaPredicted RBP3.95□□□□□ -1.78
RUB1YDR139C YSP3P25036 478 aa3.95□□□□□ -1.78
RUB1YDR139C SPC97P38863 823 aa3.95□□□□□ -1.78
RUB1YDR139C IML2P47031 731 aa3.95□□□□□ -1.78
RUB1YDR139C PSP1P50896 841 aaKnown RBP3.95□□□□□ -1.78
RUB1YDR139C VTC3Q02725 835 aa3.95□□□□□ -1.78
RUB1YDR139C PDR8Q06149 701 aa3.95□□□□□ -1.78
RUB1YDR139C TMA16Q08687 178 aa3.95□□□□□ -1.78
RUB1YDR139C RGT2Q12300 763 aa3.95□□□□□ -1.78
RUB1YDR139C ICT1Q12385 394 aa3.95□□□□□ -1.78
RUB1YDR139C ERG27Q12452 347 aaKnown RBP3.95□□□□□ -1.78
RUB1YDR139C GAL4P04386 881 aa3.94□□□□□ -1.78
RUB1YDR139C DPB3P27344 201 aa3.94□□□□□ -1.78
RUB1YDR139C TMT1P32643 299 aa3.94□□□□□ -1.78
RUB1YDR139C RPT3P33298 428 aaKnown RBP3.94□□□□□ -1.78
RUB1YDR139C TFC3P34111 1160 aa3.94□□□□□ -1.78
RUB1YDR139C OCT1P35999 772 aa3.94□□□□□ -1.78
RUB1YDR139C TOM71P38825 639 aaKnown RBP3.94□□□□□ -1.78
RUB1YDR139C TPA1P40032 644 aaKnown RBP3.94□□□□□ -1.78
RUB1YDR139C PCI8P40512 444 aa3.94□□□□□ -1.78
RUB1YDR139C GAT1P43574 510 aa3.94□□□□□ -1.78
RUB1YDR139C RRT6P53117 311 aaPredicted RBP3.94□□□□□ -1.78
RUB1YDR139C SEC5P89102 971 aa3.94□□□□□ -1.78
RUB1YDR139C VID22Q05934 901 aa3.94□□□□□ -1.78
RUB1YDR139C MCH4Q08268 501 aa3.94□□□□□ -1.78
RUB1YDR139C RRI1Q12468 440 aa3.94□□□□□ -1.78
RUB1YDR139C YPR089WO13585 888 aa3.93□□□□□ -1.78
RUB1YDR139C SNF1P06782 633 aaKnown RBP3.93□□□□□ -1.78
RUB1YDR139C CNA1P23287 553 aa3.93□□□□□ -1.78
RUB1YDR139C SRB5P32585 307 aa3.93□□□□□ -1.78
RUB1YDR139C CNS1P33313 385 aa3.93□□□□□ -1.78
RUB1YDR139C SLC1P33333 303 aa3.93□□□□□ -1.78
RUB1YDR139C FLO5P38894 1075 aa3.93□□□□□ -1.78
RUB1YDR139C YMR124WP39523 943 aaKnown RBP3.93□□□□□ -1.78
RUB1YDR139C RIC1P40395 1056 aa3.93□□□□□ -1.78
RUB1YDR139C ECM16Q04217 1267 aaKnown RBP3.93□□□□□ -1.78
RUB1YDR139C MRPL1Q04599 285 aa3.93□□□□□ -1.78
RUB1YDR139C CRN1Q06440 651 aa3.93□□□□□ -1.78
RUB1YDR139C YER190C-BP0CX94 160 aa3.92□□□□□ -1.78
RUB1YDR139C YEL077W-AP0CX95 160 aa3.92□□□□□ -1.78
RUB1YDR139C YGR296C-BP0CX96 160 aa3.92□□□□□ -1.78
RUB1YDR139C YPL283W-BP0CX97 160 aa3.92□□□□□ -1.78
RUB1YDR139C YPR204C-AP0CX98 160 aa3.92□□□□□ -1.78
RUB1YDR139C SRP54P20424 541 aaKnown RBP3.92□□□□□ -1.78
RUB1YDR139C TRX2P22803 104 aaKnown RBP3.92□□□□□ -1.78
RUB1YDR139C SOF1P33750 489 aaKnown RBP3.92□□□□□ -1.78
RUB1YDR139C LHS1P36016 881 aa3.92□□□□□ -1.78
RUB1YDR139C ADE17P38009 592 aaKnown RBP3.92□□□□□ -1.78
RUB1YDR139C SCO2P38072 301 aa3.92□□□□□ -1.78
RUB1YDR139C MRX1P40050 688 aa3.92□□□□□ -1.78
RUB1YDR139C KAP123P40069 1113 aaKnown RBP3.92□□□□□ -1.78
RUB1YDR139C SNM1P40993 198 aa3.92□□□□□ -1.78
RUB1YDR139C BNA1P47096 177 aa3.92□□□□□ -1.78
RUB1YDR139C UBP8P50102 471 aa3.92□□□□□ -1.78
RUB1YDR139C YNL144CP53907 740 aa3.92□□□□□ -1.78
RUB1YDR139C FCP1Q03254 732 aa3.92□□□□□ -1.78
RUB1YDR139C PIG1Q06216 648 aa3.92□□□□□ -1.78
RUB1YDR139C YAP7Q08182 245 aa3.92□□□□□ -1.78
RUB1YDR139C TRM8Q12009 286 aa3.92□□□□□ -1.78
Retrieved 100 of 5,963 RNA–protein pairs in 21.5 ms