RNA–Protein interactions for RNA: YDR138W

HPR1, Transcript of Subunit of THO/TREX complexes, yeastyeast

Gene HPR1, Length 2,259 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HPR1YDR138W LCB2P40970 561 aa4.37□□□□□ -1.71
HPR1YDR138W IME4P41833 600 aa4.37□□□□□ -1.71
HPR1YDR138W SWP82P43554 623 aa4.37□□□□□ -1.71
HPR1YDR138W ASE1P50275 885 aa4.37□□□□□ -1.71
HPR1YDR138W YNL092WP53934 400 aa4.37□□□□□ -1.71
HPR1YDR138W AIM32Q04689 311 aa4.37□□□□□ -1.71
HPR1YDR138W YEH1Q07804 573 aa4.37□□□□□ -1.71
HPR1YDR138W RFA2P26754 273 aaKnown RBP4.36□□□□□ -1.71
HPR1YDR138W MAL33P38157 468 aa4.36□□□□□ -1.71
HPR1YDR138W YBL029WP38201 376 aa4.36□□□□□ -1.71
HPR1YDR138W IDS2P46958 469 aa4.36□□□□□ -1.71
HPR1YDR138W MDE1P47095 244 aa4.36□□□□□ -1.71
HPR1YDR138W MUP1P50276 574 aa4.36□□□□□ -1.71
HPR1YDR138W UBC11P52492 156 aa4.36□□□□□ -1.71
HPR1YDR138W ACK1Q07622 623 aaPredicted RBP4.36□□□□□ -1.71
HPR1YDR138W KEL3Q08979 651 aaPredicted RBP4.36□□□□□ -1.71
HPR1YDR138W SFI1Q12369 946 aa4.36□□□□□ -1.71
HPR1YDR138W VPS34P22543 875 aa4.35□□□□□ -1.71
HPR1YDR138W RAD51P25454 400 aa4.35□□□□□ -1.71
HPR1YDR138W LRE1P25579 583 aaKnown RBP4.35□□□□□ -1.71
HPR1YDR138W ELF1P36053 145 aa4.35□□□□□ -1.71
HPR1YDR138W CST26P38226 397 aa4.35□□□□□ -1.71
HPR1YDR138W RPA49Q01080 415 aaPredicted RBP4.35□□□□□ -1.71
HPR1YDR138W MTG1Q03151 367 aaPredicted RBP4.35□□□□□ -1.71
HPR1YDR138W MRD1Q06106 887 aaKnown RBP4.35□□□□□ -1.71
HPR1YDR138W IRC13Q08630 104 aa4.35□□□□□ -1.71
HPR1YDR138W AMD2P22580 549 aa4.35□□□□□ -1.71
HPR1YDR138W POT1P27796 417 aaKnown RBP RIP-Chip data4.35□□□□□ -1.71not detected
HPR1YDR138W SDH8P38345 138 aa4.35□□□□□ -1.71
HPR1YDR138W UBP7P40453 1071 aa4.35□□□□□ -1.71
HPR1YDR138W ATP22P50273 684 aaPredicted RBP4.35□□□□□ -1.71
HPR1YDR138W OAZ1Q02803 292 aa4.35□□□□□ -1.71
HPR1YDR138W PRP42Q03776 544 aaKnown RBP4.35□□□□□ -1.71
HPR1YDR138W SWT1Q12104 458 aa4.35□□□□□ -1.71
HPR1YDR138W ISA2Q12425 185 aa4.35□□□□□ -1.71
HPR1YDR138W SIR3P06701 978 aa4.34□□□□□ -1.71
HPR1YDR138W SEC12P11655 471 aa4.34□□□□□ -1.71
HPR1YDR138W THR1P17423 357 aaKnown RBP4.34□□□□□ -1.71
HPR1YDR138W PRP28P23394 588 aa4.34□□□□□ -1.71
HPR1YDR138W MVD1P32377 396 aaKnown RBP4.34□□□□□ -1.71
HPR1YDR138W PHO11P35842 467 aa4.34□□□□□ -1.71
HPR1YDR138W KTR3P38130 404 aaPredicted RBP4.34□□□□□ -1.71
HPR1YDR138W PHO12P38693 467 aa4.34□□□□□ -1.71
HPR1YDR138W DOT5P40553 215 aa4.34□□□□□ -1.71
HPR1YDR138W MRPL22P53881 309 aa4.34□□□□□ -1.71
HPR1YDR138W ETT1Q08421 412 aaKnown RBP4.34□□□□□ -1.71
HPR1YDR138W APL5Q08951 932 aaKnown RBP4.34□□□□□ -1.71
HPR1YDR138W SMF3Q12078 473 aaPredicted RBP4.34□□□□□ -1.71
HPR1YDR138W PCT1P13259 424 aa4.34□□□□□ -1.72
HPR1YDR138W SEC15P22224 910 aa4.34□□□□□ -1.72
HPR1YDR138W CLB1P24868 471 aa4.34□□□□□ -1.72
HPR1YDR138W ERV1P27882 189 aa4.34□□□□□ -1.72
HPR1YDR138W SPC110P32380 944 aa4.34□□□□□ -1.72
HPR1YDR138W SRB5P32585 307 aa4.34□□□□□ -1.72
HPR1YDR138W THI2P38141 450 aa4.34□□□□□ -1.72
HPR1YDR138W YIL166CP40445 542 aa4.34□□□□□ -1.72
HPR1YDR138W YIR042CP40586 236 aa4.34□□□□□ -1.72
HPR1YDR138W GPI8P49018 411 aa4.34□□□□□ -1.72
HPR1YDR138W HOS2P53096 452 aaPredicted RBP4.34□□□□□ -1.72
HPR1YDR138W NNF2P53253 936 aa4.34□□□□□ -1.72
HPR1YDR138W SNO2P53823 222 aa4.34□□□□□ -1.72
HPR1YDR138W DAK1P54838 584 aaKnown RBP4.34□□□□□ -1.72
HPR1YDR138W GTB1Q04924 702 aa4.34□□□□□ -1.72
HPR1YDR138W RXT3Q07458 294 aa4.34□□□□□ -1.72
HPR1YDR138W FMP45Q07651 309 aa4.34□□□□□ -1.72
HPR1YDR138W PDH1Q12428 516 aaKnown RBP4.34□□□□□ -1.72
HPR1YDR138W CDC5P32562 705 aa4.33□□□□□ -1.72
HPR1YDR138W MDL1P33310 695 aa4.33□□□□□ -1.72
HPR1YDR138W CTP1P38152 299 aa4.33□□□□□ -1.72
HPR1YDR138W EFM4P40516 257 aa4.33□□□□□ -1.72
HPR1YDR138W NAS2P40555 220 aa4.33□□□□□ -1.72
HPR1YDR138W YGR079WP53249 370 aa4.33□□□□□ -1.72
HPR1YDR138W SPC98P53540 846 aa4.33□□□□□ -1.72
HPR1YDR138W CLU1Q03690 1277 aaKnown RBP4.33□□□□□ -1.72
HPR1YDR138W RBS1Q05672 457 aaKnown RBP4.33□□□□□ -1.72
HPR1YDR138W YOL159CQ08300 171 aa4.33□□□□□ -1.72
HPR1YDR138W NFI1Q12216 726 aa4.33□□□□□ -1.72
HPR1YDR138W YPR053CQ6Q5F3 151 aa4.33□□□□□ -1.72
HPR1YDR138W TRP4P07285 380 aaPredicted RBP4.33□□□□□ -1.72
HPR1YDR138W ARD1P07347 238 aaPredicted RBP4.33□□□□□ -1.72
HPR1YDR138W SRP54P20424 541 aaKnown RBP4.33□□□□□ -1.72
HPR1YDR138W KGD1P20967 1014 aaKnown RBP4.33□□□□□ -1.72
HPR1YDR138W CAD1P24813 409 aaKnown RBP4.33□□□□□ -1.72
HPR1YDR138W TSA1P34760 196 aaKnown RBP4.33□□□□□ -1.72
HPR1YDR138W YJL206CP39529 758 aa4.33□□□□□ -1.72
HPR1YDR138W SAE2P46946 345 aa4.33□□□□□ -1.72
HPR1YDR138W CTF4Q01454 927 aa4.33□□□□□ -1.72
HPR1YDR138W YML037CQ03703 340 aa4.33□□□□□ -1.72
HPR1YDR138W NUS1Q12063 375 aa4.33□□□□□ -1.72
HPR1YDR138W PUS1Q12211 544 aaKnown RBP4.33□□□□□ -1.72
HPR1YDR138W YJR112W-AQ3E743 109 aa4.33□□□□□ -1.72
HPR1YDR138W BRF1P29056 596 aa4.32□□□□□ -1.72
HPR1YDR138W PIG2P40187 538 aa4.32□□□□□ -1.72
HPR1YDR138W THI6P41835 540 aa4.32□□□□□ -1.72
HPR1YDR138W MAF1P41910 395 aa4.32□□□□□ -1.72
HPR1YDR138W ZIM17P42844 174 aa4.32□□□□□ -1.72
HPR1YDR138W CTK2P46962 323 aa4.32□□□□□ -1.72
HPR1YDR138W NPA3P47122 385 aa4.32□□□□□ -1.72
HPR1YDR138W INA17Q02888 182 aa4.32□□□□□ -1.72
HPR1YDR138W MMR1Q06324 491 aa4.32□□□□□ -1.72
Retrieved 100 of 5,963 RNA–protein pairs in 20.9 ms