RNA–Protein interactions for RNA: YDR120C

TRM1, Transcript of tRNA methyltransferase, yeast

Gene TRM1, Length 1,713 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TRM1	YDR120C	QRI1	P43123	477 aa	Known RBP	4.63	□□□□□ -1.67
TRM1	YDR120C	CSL4	P53859	292 aa	Predicted RBP	4.63	□□□□□ -1.67
TRM1	YDR120C	UBP16	Q02863	499 aa		4.63	□□□□□ -1.67
TRM1	YDR120C	MTG1	Q03151	367 aa	Predicted RBP	4.63	□□□□□ -1.67
TRM1	YDR120C	GIS1	Q03833	894 aa		4.63	□□□□□ -1.67
TRM1	YDR120C	ARG7	Q04728	441 aa		4.63	□□□□□ -1.67
TRM1	YDR120C	PCL8	Q08966	492 aa		4.63	□□□□□ -1.67
TRM1	YDR120C	KRE5	P22023	1365 aa		4.63	□□□□□ -1.67
TRM1	YDR120C	RPN13	O13563	156 aa		4.63	□□□□□ -1.67
TRM1	YDR120C	RPL7A	P05737	244 aa	Known RBP	4.63	□□□□□ -1.67
TRM1	YDR120C	PFK2	P16862	959 aa	Known RBP RIP-Chip data	4.63	□□□□□ -1.67	not detected
TRM1	YDR120C	PMA2	P19657	947 aa		4.63	□□□□□ -1.67
TRM1	YDR120C	GDA1	P32621	518 aa		4.63	□□□□□ -1.67
TRM1	YDR120C	TEF4	P36008	412 aa	Known RBP	4.63	□□□□□ -1.67
TRM1	YDR120C	YER010C	P40011	234 aa		4.63	□□□□□ -1.67
TRM1	YDR120C	YFL015C	P43578	164 aa		4.63	□□□□□ -1.67
TRM1	YDR120C	STU2	P46675	888 aa		4.63	□□□□□ -1.67
TRM1	YDR120C	IMO32	P53219	342 aa		4.63	□□□□□ -1.67
TRM1	YDR120C	MEP3	P53390	489 aa		4.63	□□□□□ -1.67
TRM1	YDR120C	WAR1	Q03631	944 aa		4.63	□□□□□ -1.67
TRM1	YDR120C	RPL7B	Q12213	244 aa	Known RBP	4.63	□□□□□ -1.67
TRM1	YDR120C	Q0010	Q9ZZX9	128 aa		4.63	□□□□□ -1.67
TRM1	YDR120C	SAT4	P25333	603 aa	Known RBP	4.62	□□□□□ -1.67
TRM1	YDR120C	MRPL9	P31334	269 aa		4.62	□□□□□ -1.67
TRM1	YDR120C	UGP1	P32861	499 aa	Known RBP	4.62	□□□□□ -1.67
TRM1	YDR120C	MTG2	P38860	518 aa		4.62	□□□□□ -1.67
TRM1	YDR120C	LAS21	P40367	830 aa		4.62	□□□□□ -1.67
TRM1	YDR120C	YIL166C	P40445	542 aa		4.62	□□□□□ -1.67
TRM1	YDR120C	MRK1	P50873	501 aa		4.62	□□□□□ -1.67
TRM1	YDR120C	COG1	P53079	417 aa		4.62	□□□□□ -1.67
TRM1	YDR120C	YMR018W	Q04364	514 aa		4.62	□□□□□ -1.67
TRM1	YDR120C	GTB1	Q04924	702 aa		4.62	□□□□□ -1.67
TRM1	YDR120C	STP3	Q05937	343 aa		4.62	□□□□□ -1.67
TRM1	YDR120C	LCB4	Q12246	624 aa		4.62	□□□□□ -1.67
TRM1	YDR120C	RVB2	Q12464	471 aa	Known RBP	4.62	□□□□□ -1.67
TRM1	YDR120C	ATP2	P00830	511 aa	Known RBP	4.61	□□□□□ -1.67
TRM1	YDR120C	TY2A-LR1	P0C2J4	438 aa		4.61	□□□□□ -1.67
TRM1	YDR120C	TY2A-F	P0CX61	438 aa		4.61	□□□□□ -1.67
TRM1	YDR120C	TY2A-GR2	P0CX62	438 aa		4.61	□□□□□ -1.67
TRM1	YDR120C	TY2A-C	P25383	438 aa		4.61	□□□□□ -1.67
TRM1	YDR120C	NUP120	P35729	1037 aa		4.61	□□□□□ -1.67
TRM1	YDR120C	TY2A-DR2	Q03483	438 aa		4.61	□□□□□ -1.67
TRM1	YDR120C	RAD33	Q04231	177 aa		4.61	□□□□□ -1.67
TRM1	YDR120C	MRI1	Q06489	411 aa	Known RBP	4.61	□□□□□ -1.67
TRM1	YDR120C	ULA1	Q12059	462 aa		4.61	□□□□□ -1.67
TRM1	YDR120C	TY2A-B	Q12260	438 aa		4.61	□□□□□ -1.67
TRM1	YDR120C	PRS5	Q12265	496 aa	Known RBP	4.61	□□□□□ -1.67
TRM1	YDR120C	TY2A-OR2	Q12293	438 aa		4.61	□□□□□ -1.67
TRM1	YDR120C	TY2A-DR1	Q12392	438 aa		4.61	□□□□□ -1.67
TRM1	YDR120C	TY2A-OR1	Q12439	438 aa		4.61	□□□□□ -1.67
TRM1	YDR120C	TY2A-DR3	Q99303	438 aa		4.61	□□□□□ -1.67
TRM1	YDR120C	YMC1	P32331	307 aa		4.6	□□□□□ -1.67
TRM1	YDR120C	CBF2	P32504	956 aa		4.6	□□□□□ -1.67
TRM1	YDR120C	GEX2	P36173	615 aa		4.6	□□□□□ -1.67
TRM1	YDR120C	COG2	P53271	262 aa		4.6	□□□□□ -1.67
TRM1	YDR120C	TMA64	Q04600	565 aa	Known RBP	4.6	□□□□□ -1.67
TRM1	YDR120C	PDR11	P40550	1411 aa		4.6	□□□□□ -1.67
TRM1	YDR120C	BCK1	Q01389	1478 aa		4.6	□□□□□ -1.67
TRM1	YDR120C	CFT1	Q06632	1357 aa	Known RBP	4.6	□□□□□ -1.67
TRM1	YDR120C	RPA135	P22138	1203 aa	Known RBP	4.6	□□□□□ -1.67
TRM1	YDR120C	AAD3	P25612	363 aa		4.6	□□□□□ -1.67
TRM1	YDR120C	CNS1	P33313	385 aa		4.6	□□□□□ -1.67
TRM1	YDR120C	ERC1	P38767	581 aa		4.6	□□□□□ -1.67
TRM1	YDR120C	PAC2	P39937	518 aa		4.6	□□□□□ -1.67
TRM1	YDR120C	IST3	P40565	148 aa	Predicted RBP	4.6	□□□□□ -1.67
TRM1	YDR120C	TDA10	P42938	290 aa		4.6	□□□□□ -1.67
TRM1	YDR120C	YGR079W	P53249	370 aa		4.6	□□□□□ -1.67
TRM1	YDR120C	APM1	Q00776	475 aa	Predicted RBP	4.6	□□□□□ -1.67
TRM1	YDR120C	YML053C	Q04978	212 aa		4.6	□□□□□ -1.67
TRM1	YDR120C	AHA1	Q12449	350 aa	Known RBP	4.6	□□□□□ -1.67
TRM1	YDR120C	YMR084W	A2P2R3	262 aa		4.59	□□□□□ -1.67
TRM1	YDR120C	RRP43	P25359	394 aa	Predicted RBP	4.59	□□□□□ -1.67
TRM1	YDR120C	LRE1	P25579	583 aa	Known RBP	4.59	□□□□□ -1.67
TRM1	YDR120C	YJU2	P28320	278 aa	Predicted RBP	4.59	□□□□□ -1.67
TRM1	YDR120C	CHS3	P29465	1165 aa		4.59	□□□□□ -1.67
TRM1	YDR120C	SIP1	P32578	815 aa		4.59	□□□□□ -1.67
TRM1	YDR120C	RPF2	P36160	344 aa	Known RBP	4.59	□□□□□ -1.67
TRM1	YDR120C	RIC1	P40395	1056 aa		4.59	□□□□□ -1.67
TRM1	YDR120C	YIL161W	P40449	235 aa	Known RBP	4.59	□□□□□ -1.67
TRM1	YDR120C	MNT3	P40549	630 aa		4.59	□□□□□ -1.67
TRM1	YDR120C	OPT1	P40897	799 aa		4.59	□□□□□ -1.67
TRM1	YDR120C	NPA3	P47122	385 aa		4.59	□□□□□ -1.67
TRM1	YDR120C	ASE1	P50275	885 aa		4.59	□□□□□ -1.67
TRM1	YDR120C	CBK1	P53894	756 aa		4.59	□□□□□ -1.67
TRM1	YDR120C	SNO4	Q04902	237 aa		4.59	□□□□□ -1.67
TRM1	YDR120C	ATG23	Q06671	453 aa		4.59	□□□□□ -1.67
TRM1	YDR120C	HSP33	Q08914	237 aa	Known RBP	4.59	□□□□□ -1.67
TRM1	YDR120C	HSP32	Q08992	237 aa		4.59	□□□□□ -1.67
TRM1	YDR120C	YOL087C	Q99247	1116 aa		4.59	□□□□□ -1.67
TRM1	YDR120C	ADE5,7	P07244	802 aa	Known RBP	4.58	□□□□□ -1.68
TRM1	YDR120C	YML003W	P0CF16	290 aa		4.58	□□□□□ -1.68
TRM1	YDR120C	SPO16	P17122	198 aa		4.58	□□□□□ -1.68
TRM1	YDR120C	SPO11	P23179	398 aa		4.58	□□□□□ -1.68
TRM1	YDR120C	ADY2	P25613	283 aa		4.58	□□□□□ -1.68
TRM1	YDR120C	EXO1	P39875	702 aa		4.58	□□□□□ -1.68
TRM1	YDR120C	DPH1	P40487	425 aa	Known RBP	4.58	□□□□□ -1.68
TRM1	YDR120C	PLM2	Q04383	521 aa		4.58	□□□□□ -1.68
TRM1	YDR120C	HRD3	Q05787	833 aa		4.58	□□□□□ -1.68
TRM1	YDR120C	TMA16	Q08687	178 aa		4.58	□□□□□ -1.68
TRM1	YDR120C	YDR056C	Q12025	205 aa		4.58	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 19.4 ms