RNA–Protein interactions for RNA: YDR079C-A

TFB5, Transcript of Component of RNA polymerase II general transcription factor TFIIH, yeastyeast

Gene TFB5, Length 219 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TFB5YDR079C-A ARG1P22768 420 aa0.31□□□□□ -2.36
TFB5YDR079C-A UTH1P36135 365 aa0.31□□□□□ -2.36
TFB5YDR079C-A SWD3P38123 315 aa0.31□□□□□ -2.36
TFB5YDR079C-A SEC31P38968 1273 aaKnown RBP0.31□□□□□ -2.36
TFB5YDR079C-A RPR2P40571 144 aa0.31□□□□□ -2.36
TFB5YDR079C-A HUL5P53119 910 aa0.31□□□□□ -2.36
TFB5YDR079C-A TAM41P53230 385 aa0.31□□□□□ -2.36
TFB5YDR079C-A CTL1Q03220 320 aaKnown RBP0.31□□□□□ -2.36
TFB5YDR079C-A TMA64Q04600 565 aaKnown RBP0.31□□□□□ -2.36
TFB5YDR079C-A FAP7Q12055 197 aaPredicted RBP0.31□□□□□ -2.36
TFB5YDR079C-A YCL021W-AQ96VH3 125 aa0.31□□□□□ -2.36
TFB5YDR079C-A CCH1P50077 2039 aa0.3□□□□□ -2.36
TFB5YDR079C-A YER145C-AA0A023PYF4 145 aa0.3□□□□□ -2.36
TFB5YDR079C-A PMR1P13586 950 aa0.3□□□□□ -2.36
TFB5YDR079C-A CDC26P14724 124 aa0.3□□□□□ -2.36
TFB5YDR079C-A NAM9P27929 486 aa0.3□□□□□ -2.36
TFB5YDR079C-A ERG1P32476 496 aaKnown RBP0.3□□□□□ -2.36
TFB5YDR079C-A RCK2P38623 610 aa0.3□□□□□ -2.36
TFB5YDR079C-A YGR210CP42942 411 aa0.3□□□□□ -2.36
TFB5YDR079C-A HLJ1P48353 224 aa0.3□□□□□ -2.36
TFB5YDR079C-A YRB30P53107 440 aaPredicted RBP0.3□□□□□ -2.36
TFB5YDR079C-A PEF1P53238 335 aa0.3□□□□□ -2.36
TFB5YDR079C-A SQS1P53866 767 aaKnown RBP0.3□□□□□ -2.36
TFB5YDR079C-A RPM2Q02773 1202 aa0.3□□□□□ -2.36
TFB5YDR079C-A RRG7Q08774 242 aaPredicted RBP0.3□□□□□ -2.36
TFB5YDR079C-A YOR387CQ08910 206 aa0.3□□□□□ -2.36
TFB5YDR079C-A RBD2Q12270 262 aa0.3□□□□□ -2.36
TFB5YDR079C-A MIC60P36112 540 aa0.29□□□□□ -2.36
TFB5YDR079C-A RPF2P36160 344 aaKnown RBP0.29□□□□□ -2.36
TFB5YDR079C-A RTT101P47050 842 aa0.29□□□□□ -2.36
TFB5YDR079C-A NOP8Q08287 484 aaPredicted RBP0.29□□□□□ -2.36
TFB5YDR079C-A YBL111CQ3E7Y5 667 aa0.29□□□□□ -2.36
TFB5YDR079C-A ERR1P0CX10 437 aa0.28□□□□□ -2.36
TFB5YDR079C-A ERR2P0CX11 437 aa0.28□□□□□ -2.36
TFB5YDR079C-A SPT15P13393 240 aaKnown RBP0.28□□□□□ -2.36
TFB5YDR079C-A YEN1P40028 759 aa0.28□□□□□ -2.36
TFB5YDR079C-A VID28P40547 921 aa0.28□□□□□ -2.36
TFB5YDR079C-A RET2P43621 546 aa0.28□□□□□ -2.36
TFB5YDR079C-A YPR117WQ06116 2489 aa0.27□□□□□ -2.37
TFB5YDR079C-A SEC65P29478 273 aa0.27□□□□□ -2.37
TFB5YDR079C-A IKS1P47042 667 aa0.27□□□□□ -2.37
TFB5YDR079C-A ASI1P54074 624 aa0.27□□□□□ -2.37
TFB5YDR079C-A GRC3Q07845 632 aa0.27□□□□□ -2.37
TFB5YDR079C-A GID7P25569 745 aa0.26□□□□□ -2.37
TFB5YDR079C-A PRP45P28004 379 aaPredicted RBP0.26□□□□□ -2.37
TFB5YDR079C-A ARP10Q04549 284 aa0.26□□□□□ -2.37
TFB5YDR079C-A IES4Q08561 116 aa0.26□□□□□ -2.37
TFB5YDR079C-A RPS21BQ3E754 87 aaKnown RBP0.26□□□□□ -2.37
TFB5YDR079C-A GCN1P33892 2672 aaKnown RBP0.25□□□□□ -2.37
TFB5YDR079C-A CUP1-1P0CX80 61 aa0.25□□□□□ -2.37
TFB5YDR079C-A CUP1-2P0CX81 61 aa0.25□□□□□ -2.37
TFB5YDR079C-A CLN3P13365 580 aa0.25□□□□□ -2.37
TFB5YDR079C-A TDA3P38758 523 aa0.25□□□□□ -2.37
TFB5YDR079C-A SGF73P53165 657 aa0.25□□□□□ -2.37
TFB5YDR079C-A YLR455WQ06188 304 aa0.25□□□□□ -2.37
TFB5YDR079C-A GUD1Q07729 489 aa0.25□□□□□ -2.37
TFB5YDR079C-A YER078W-AQ3E7A2 54 aa0.25□□□□□ -2.37
TFB5YDR079C-A TOR1P35169 2470 aa0.24□□□□□ -2.37
TFB5YDR079C-A SPA2P23201 1466 aaKnown RBP0.24□□□□□ -2.37
TFB5YDR079C-A EDE1P34216 1381 aa0.24□□□□□ -2.37
TFB5YDR079C-A SUP35P05453 685 aaKnown RBP0.24□□□□□ -2.37
TFB5YDR079C-A PRB1P09232 635 aa0.24□□□□□ -2.37
TFB5YDR079C-A PCL1P24867 279 aa0.24□□□□□ -2.37
TFB5YDR079C-A DEG1P31115 442 aaKnown RBP0.24□□□□□ -2.37
TFB5YDR079C-A NPA3P47122 385 aa0.24□□□□□ -2.37
TFB5YDR079C-A SHY1P53266 389 aa0.24□□□□□ -2.37
TFB5YDR079C-A HAL1Q01766 294 aa0.24□□□□□ -2.37
TFB5YDR079C-A TMS1Q12116 473 aa0.24□□□□□ -2.37
TFB5YDR079C-A TEL1P38110 2787 aa0.23□□□□□ -2.37
TFB5YDR079C-A HEM2P05373 342 aa0.23□□□□□ -2.37
TFB5YDR079C-A AEP2P22136 580 aa0.23□□□□□ -2.37
TFB5YDR079C-A LAC1P28496 418 aa0.23□□□□□ -2.37
TFB5YDR079C-A SIP1P32578 815 aa0.23□□□□□ -2.37
TFB5YDR079C-A ERG7P38604 731 aa0.23□□□□□ -2.37
TFB5YDR079C-A YER130CP39959 443 aa0.23□□□□□ -2.37
TFB5YDR079C-A IDS2P46958 469 aa0.23□□□□□ -2.37
TFB5YDR079C-A YPR091CQ06833 770 aa0.23□□□□□ -2.37
TFB5YDR079C-A PRP8P33334 2413 aaKnown RBP0.23□□□□□ -2.37
TFB5YDR079C-A FMP27Q06179 2628 aa0.22□□□□□ -2.37
TFB5YDR079C-A MRP2P10663 115 aaPredicted RBP0.22□□□□□ -2.37
TFB5YDR079C-A MTF1P14908 341 aaKnown RBP0.22□□□□□ -2.37
TFB5YDR079C-A STE50P25344 346 aa0.22□□□□□ -2.37
TFB5YDR079C-A NDC1P32500 655 aa0.22□□□□□ -2.37
TFB5YDR079C-A RPT2P40327 437 aaKnown RBP0.22□□□□□ -2.37
TFB5YDR079C-A HXT9P40885 567 aa0.22□□□□□ -2.37
TFB5YDR079C-A CIA1Q05583 330 aa0.22□□□□□ -2.37
TFB5YDR079C-A HNT3Q08702 217 aa0.22□□□□□ -2.37
TFB5YDR079C-A PRM7Q12459 698 aa0.22□□□□□ -2.37
TFB5YDR079C-A CWH43P25618 953 aa0.21□□□□□ -2.38
TFB5YDR079C-A SPC110P32380 944 aa0.21□□□□□ -2.38
TFB5YDR079C-A PAD1P33751 242 aaKnown RBP RIP-Chip data0.21□□□□□ -2.38not detected
TFB5YDR079C-A SKI2P35207 1287 aaKnown RBP RIP-Chip data0.21□□□□□ -2.38not detected
TFB5YDR079C-A OAF3P36023 863 aa0.21□□□□□ -2.38
TFB5YDR079C-A SPC34P36131 295 aa0.21□□□□□ -2.38
TFB5YDR079C-A FAT1P38225 669 aa0.21□□□□□ -2.38
TFB5YDR079C-A HXT6P39003 570 aaKnown RBP0.21□□□□□ -2.38
TFB5YDR079C-A HXT7P39004 570 aa0.21□□□□□ -2.38
TFB5YDR079C-A PEA2P40091 420 aa0.21□□□□□ -2.38
TFB5YDR079C-A MDR1P53258 950 aa0.21□□□□□ -2.38
TFB5YDR079C-A YVH1Q02256 364 aaKnown RBP0.21□□□□□ -2.38
Retrieved 100 of 5,963 RNA–protein pairs in 12.7 ms