RNA–Protein interactions for RNA: YDR059C

UBC5, Transcript of Ubiquitin-conjugating enzyme, yeast

Gene UBC5, Length 447 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UBC5	YDR059C	GTB1	Q04924	702 aa		4.22	□□□□□ -1.73
UBC5	YDR059C	YMR230W-A	Q3E7B5	62 aa		4.22	□□□□□ -1.73
UBC5	YDR059C	PAF1	P38351	445 aa		4.21	□□□□□ -1.74
UBC5	YDR059C	BZZ1	P38822	633 aa		4.21	□□□□□ -1.74
UBC5	YDR059C	PHM8	P40025	321 aa		4.21	□□□□□ -1.74
UBC5	YDR059C	ASG1	P40467	964 aa		4.21	□□□□□ -1.74
UBC5	YDR059C	APL5	Q08951	932 aa	Known RBP	4.21	□□□□□ -1.74
UBC5	YDR059C	CDC23	P16522	626 aa		4.2	□□□□□ -1.74
UBC5	YDR059C	FRD1	P32614	470 aa	Known RBP	4.2	□□□□□ -1.74
UBC5	YDR059C	ASK10	P48361	1146 aa		4.2	□□□□□ -1.74
UBC5	YDR059C	YPL108W	Q02872	168 aa	Predicted RBP	4.2	□□□□□ -1.74
UBC5	YDR059C	FRE3	Q08905	711 aa		4.2	□□□□□ -1.74
UBC5	YDR059C	ICL2	Q12031	575 aa		4.2	□□□□□ -1.74
UBC5	YDR059C	GPA1	P08539	472 aa		4.19	□□□□□ -1.74
UBC5	YDR059C	NOP1	P15646	327 aa	Known RBP	4.19	□□□□□ -1.74
UBC5	YDR059C	YCR006C	P25350	157 aa		4.19	□□□□□ -1.74
UBC5	YDR059C	EFM2	P38347	419 aa		4.19	□□□□□ -1.74
UBC5	YDR059C	ESBP6	P53918	673 aa		4.19	□□□□□ -1.74
UBC5	YDR059C	YDR109C	Q04585	715 aa		4.19	□□□□□ -1.74
UBC5	YDR059C	YMR254C	Q04838	102 aa		4.19	□□□□□ -1.74
UBC5	YDR059C	TAH18	Q12181	623 aa		4.19	□□□□□ -1.74
UBC5	YDR059C	ARP7	Q12406	477 aa		4.19	□□□□□ -1.74
UBC5	YDR059C	PSP1	P50896	841 aa	Known RBP	4.18	□□□□□ -1.74
UBC5	YDR059C	RVB2	Q12464	471 aa	Known RBP	4.18	□□□□□ -1.74
UBC5	YDR059C	MRP2	P10663	115 aa	Predicted RBP	4.17	□□□□□ -1.74
UBC5	YDR059C	MSY1	P48527	492 aa		4.17	□□□□□ -1.74
UBC5	YDR059C	SND1	Q04007	877 aa		4.17	□□□□□ -1.74
UBC5	YDR059C	BAG7	Q12128	409 aa		4.17	□□□□□ -1.74
UBC5	YDR059C	URK1	P27515	501 aa		4.16	□□□□□ -1.74
UBC5	YDR059C	IML2	P47031	731 aa		4.16	□□□□□ -1.74
UBC5	YDR059C	SUI3	P09064	285 aa	Known RBP	4.15	□□□□□ -1.75
UBC5	YDR059C	PCT1	P13259	424 aa		4.15	□□□□□ -1.75
UBC5	YDR059C	CUL3	P53202	744 aa		4.15	□□□□□ -1.75
UBC5	YDR059C	CEG1	Q01159	459 aa	Predicted RBP	4.15	□□□□□ -1.75
UBC5	YDR059C	YLR455W	Q06188	304 aa		4.15	□□□□□ -1.75
UBC5	YDR059C	MCM3	P24279	971 aa	Known RBP	4.14	□□□□□ -1.75
UBC5	YDR059C	SEC1	P30619	724 aa	Known RBP	4.14	□□□□□ -1.75
UBC5	YDR059C	LEU5	P38702	357 aa		4.14	□□□□□ -1.75
UBC5	YDR059C	STT3	P39007	718 aa	Known RBP	4.14	□□□□□ -1.75
UBC5	YDR059C	BUD16	P39988	312 aa		4.14	□□□□□ -1.75
UBC5	YDR059C	CAB2	P40506	365 aa		4.14	□□□□□ -1.75
UBC5	YDR059C	DJP1	P40564	432 aa		4.14	□□□□□ -1.75
UBC5	YDR059C	YNL181W	P53878	407 aa		4.14	□□□□□ -1.75
UBC5	YDR059C	YER145C-A	A0A023PYF4	145 aa		4.13	□□□□□ -1.75
UBC5	YDR059C	CBP1	P07252	654 aa		4.13	□□□□□ -1.75
UBC5	YDR059C	HNM1	P19807	563 aa		4.13	□□□□□ -1.75
UBC5	YDR059C	SIR1	P21691	654 aa		4.13	□□□□□ -1.75
UBC5	YDR059C	MRC1	P25588	1096 aa		4.13	□□□□□ -1.75
UBC5	YDR059C	YOX1	P34161	385 aa		4.13	□□□□□ -1.75
UBC5	YDR059C	SDS24	P38314	527 aa		4.13	□□□□□ -1.75
UBC5	YDR059C	ADE16	P54113	591 aa	Known RBP	4.13	□□□□□ -1.75
UBC5	YDR059C	TIP41	Q12199	356 aa		4.13	□□□□□ -1.75
UBC5	YDR059C	MAD3	P47074	515 aa		4.12	□□□□□ -1.75
UBC5	YDR059C	TAM41	P53230	385 aa		4.12	□□□□□ -1.75
UBC5	YDR059C	CRZ1	P53968	678 aa		4.12	□□□□□ -1.75
UBC5	YDR059C	ATG21	Q02887	496 aa		4.12	□□□□□ -1.75
UBC5	YDR059C	ATG23	Q06671	453 aa		4.12	□□□□□ -1.75
UBC5	YDR059C	YLR049C	Q12110	428 aa		4.12	□□□□□ -1.75
UBC5	YDR059C	RAD24	P32641	659 aa		4.11	□□□□□ -1.75
UBC5	YDR059C	DHH1	P39517	506 aa	Known RBP	4.11	□□□□□ -1.75
UBC5	YDR059C	YJL070C	P40361	888 aa		4.11	□□□□□ -1.75
UBC5	YDR059C	MTG1	Q03151	367 aa	Predicted RBP	4.11	□□□□□ -1.75
UBC5	YDR059C	UTP21	Q06078	939 aa	Predicted RBP	4.11	□□□□□ -1.75
UBC5	YDR059C	SUL2	Q12325	893 aa		4.11	□□□□□ -1.75
UBC5	YDR059C	PET122	P10355	254 aa		4.1	□□□□□ -1.75
UBC5	YDR059C	ATG27	P46989	271 aa		4.1	□□□□□ -1.75
UBC5	YDR059C	ASI1	P54074	624 aa		4.1	□□□□□ -1.75
UBC5	YDR059C	EIS1	Q05050	843 aa	Known RBP	4.1	□□□□□ -1.75
UBC5	YDR059C	BIK1	P11709	440 aa		4.09	□□□□□ -1.75
UBC5	YDR059C	RIT1	P23796	513 aa		4.09	□□□□□ -1.75
UBC5	YDR059C	STE50	P25344	346 aa		4.09	□□□□□ -1.75
UBC5	YDR059C	MGR1	P25573	417 aa		4.09	□□□□□ -1.75
UBC5	YDR059C	RPN2	P32565	945 aa	Known RBP	4.09	□□□□□ -1.75
UBC5	YDR059C	YML002W	P0CF17	737 aa		4.08	□□□□□ -1.76
UBC5	YDR059C	PMS1	P14242	873 aa		4.08	□□□□□ -1.76
UBC5	YDR059C	YSP3	P25036	478 aa		4.08	□□□□□ -1.76
UBC5	YDR059C	LRE1	P25579	583 aa	Known RBP	4.08	□□□□□ -1.76
UBC5	YDR059C	RFA2	P26754	273 aa	Known RBP	4.08	□□□□□ -1.76
UBC5	YDR059C	YPK3	P38070	525 aa		4.08	□□□□□ -1.76
UBC5	YDR059C	YBR139W	P38109	508 aa		4.08	□□□□□ -1.76
UBC5	YDR059C	IMA1	P53051	589 aa		4.08	□□□□□ -1.76
UBC5	YDR059C	IMP4	P53941	290 aa	Known RBP	4.08	□□□□□ -1.76
UBC5	YDR059C	YLR352W	Q06479	807 aa		4.08	□□□□□ -1.76
UBC5	YDR059C	MCP2	Q06567	569 aa		4.08	□□□□□ -1.76
UBC5	YDR059C	IWR1	Q07532	353 aa	Predicted RBP	4.08	□□□□□ -1.76
UBC5	YDR059C	ADE3	P07245	946 aa	Known RBP	4.07	□□□□□ -1.76
UBC5	YDR059C	POL3	P15436	1097 aa		4.07	□□□□□ -1.76
UBC5	YDR059C	GUK1	P15454	187 aa	Known RBP	4.07	□□□□□ -1.76
UBC5	YDR059C	DCP2	P53550	970 aa	Known RBP	4.07	□□□□□ -1.76
UBC5	YDR059C	FOL1	P53848	824 aa		4.07	□□□□□ -1.76
UBC5	YDR059C	YNL234W	P53857	426 aa		4.07	□□□□□ -1.76
UBC5	YDR059C	YML003W	P0CF16	290 aa		4.06	□□□□□ -1.76
UBC5	YDR059C	BAR1	P12630	587 aa		4.06	□□□□□ -1.76
UBC5	YDR059C	GCD7	P32502	381 aa	Predicted RBP	4.06	□□□□□ -1.76
UBC5	YDR059C	RSF1	Q05043	376 aa		4.06	□□□□□ -1.76
UBC5	YDR059C	YOL114C	Q12322	202 aa		4.06	□□□□□ -1.76
UBC5	YDR059C	PDR3	P33200	976 aa		4.05	□□□□□ -1.76
UBC5	YDR059C	ADE17	P38009	592 aa	Known RBP	4.05	□□□□□ -1.76
UBC5	YDR059C	IAH1	P41734	238 aa		4.05	□□□□□ -1.76
UBC5	YDR059C	ROK1	P45818	564 aa	Predicted RBP	4.05	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 20.2 ms