RNA–Protein interactions for RNA: YDR027C

VPS54, Transcript of Component of the GARP (Golgi-associated retrograde protein) complex, yeastyeast

Gene VPS54, Length 2,670 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS54YDR027C ATP12P22135 325 aa1.84□□□□□ -2.11
VPS54YDR027C PAF1P38351 445 aa1.84□□□□□ -2.11
VPS54YDR027C COS12P53053 380 aa1.84□□□□□ -2.11
VPS54YDR027C ARA2Q04212 335 aa1.84□□□□□ -2.11
VPS54YDR027C YMR317WQ04893 1140 aa1.84□□□□□ -2.11
VPS54YDR027C YPR027CQ12079 277 aa1.84□□□□□ -2.11
VPS54YDR027C YER175W-AQ8TGU4 54 aa1.84□□□□□ -2.11
VPS54YDR027C NIC96P34077 839 aa1.84□□□□□ -2.12
VPS54YDR027C FMP46P36141 133 aaKnown RBP1.84□□□□□ -2.12
VPS54YDR027C ENP1P38333 483 aaKnown RBP1.84□□□□□ -2.12
VPS54YDR027C GPP1P41277 250 aaKnown RBP1.84□□□□□ -2.12
VPS54YDR027C IDS2P46958 469 aa1.84□□□□□ -2.12
VPS54YDR027C GSH2Q08220 491 aa1.84□□□□□ -2.12
VPS54YDR027C FAP7Q12055 197 aaPredicted RBP1.84□□□□□ -2.12
VPS54YDR027C HOS1Q12214 470 aa1.84□□□□□ -2.12
VPS54YDR027C Q0010Q9ZZX9 128 aa1.84□□□□□ -2.12
VPS54YDR027C ARG1P22768 420 aa1.83□□□□□ -2.12
VPS54YDR027C MRC1P25588 1096 aa1.83□□□□□ -2.12
VPS54YDR027C GRX7P38068 203 aa1.83□□□□□ -2.12
VPS54YDR027C ERV46P39727 415 aa1.83□□□□□ -2.12
VPS54YDR027C YJL107CP42947 387 aa1.83□□□□□ -2.12
VPS54YDR027C IRC5P43610 853 aa1.83□□□□□ -2.12
VPS54YDR027C PEX8P53248 589 aa1.83□□□□□ -2.12
VPS54YDR027C COG6P53959 839 aa1.83□□□□□ -2.12
VPS54YDR027C YLR281CQ05863 155 aa1.83□□□□□ -2.12
VPS54YDR027C ILV2P07342 687 aaKnown RBP1.83□□□□□ -2.12
VPS54YDR027C MSS51P32335 436 aa1.83□□□□□ -2.12
VPS54YDR027C VPS8P39702 1274 aa1.83□□□□□ -2.12
VPS54YDR027C BET4Q00618 327 aa1.83□□□□□ -2.12
VPS54YDR027C SKY1Q03656 742 aa1.83□□□□□ -2.12
VPS54YDR027C YDL242WQ07746 117 aa1.83□□□□□ -2.12
VPS54YDR027C YOR378WQ08902 515 aa1.83□□□□□ -2.12
VPS54YDR027C SEC7P11075 2009 aaKnown RBP1.82□□□□□ -2.12
VPS54YDR027C SER1P33330 395 aaKnown RBP1.82□□□□□ -2.12
VPS54YDR027C STB5P38699 743 aa1.82□□□□□ -2.12
VPS54YDR027C SKP2P42843 763 aa1.82□□□□□ -2.12
VPS54YDR027C YAT1P80235 687 aa1.82□□□□□ -2.12
VPS54YDR027C RTT103Q05543 409 aa1.82□□□□□ -2.12
VPS54YDR027C URA3P03962 267 aa1.82□□□□□ -2.12
VPS54YDR027C SES1P07284 462 aaKnown RBP1.82□□□□□ -2.12
VPS54YDR027C PPZ1P26570 692 aa1.82□□□□□ -2.12
VPS54YDR027C DAL3P32459 195 aa1.82□□□□□ -2.12
VPS54YDR027C RKM3P38222 552 aa1.82□□□□□ -2.12
VPS54YDR027C SDS24P38314 527 aa1.82□□□□□ -2.12
VPS54YDR027C ARN1P38731 627 aa1.82□□□□□ -2.12
VPS54YDR027C TPM2P40414 161 aa1.82□□□□□ -2.12
VPS54YDR027C MNT2P53059 558 aa1.82□□□□□ -2.12
VPS54YDR027C YNL034WP53963 612 aa1.82□□□□□ -2.12
VPS54YDR027C DIG1Q03063 452 aaKnown RBP1.82□□□□□ -2.12
VPS54YDR027C RMP1Q12530 201 aa1.82□□□□□ -2.12
VPS54YDR027C SRB8P25648 1427 aa1.81□□□□□ -2.12
VPS54YDR027C CUP1-1P0CX80 61 aa1.81□□□□□ -2.12
VPS54YDR027C CUP1-2P0CX81 61 aa1.81□□□□□ -2.12
VPS54YDR027C YFL068WP0CX99 160 aa1.81□□□□□ -2.12
VPS54YDR027C YLL066W-AP0CY00 160 aa1.81□□□□□ -2.12
VPS54YDR027C YLL067W-AP0CY01 160 aa1.81□□□□□ -2.12
VPS54YDR027C TFC4P33339 1025 aa1.81□□□□□ -2.12
VPS54YDR027C YBR071WP38243 211 aa1.81□□□□□ -2.12
VPS54YDR027C VBA2P38358 474 aaKnown RBP1.81□□□□□ -2.12
VPS54YDR027C SND1Q04007 877 aa1.81□□□□□ -2.12
VPS54YDR027C YPL191CQ08930 360 aa1.81□□□□□ -2.12
VPS54YDR027C RPL42AP0CX27 106 aaKnown RBP1.81□□□□□ -2.12
VPS54YDR027C RPL42BP0CX28 106 aaKnown RBP1.81□□□□□ -2.12
VPS54YDR027C KGD2P19262 463 aaPredicted RBP1.81□□□□□ -2.12
VPS54YDR027C ARO9P38840 513 aaPredicted RBP1.81□□□□□ -2.12
VPS54YDR027C HOS2P53096 452 aaPredicted RBP1.81□□□□□ -2.12
VPS54YDR027C TGL2P54857 326 aa1.81□□□□□ -2.12
VPS54YDR027C TRE2Q08693 809 aa1.81□□□□□ -2.12
VPS54YDR027C CWC2Q12046 339 aaPredicted RBP1.81□□□□□ -2.12
VPS54YDR027C RSF2P46974 1380 aa1.8□□□□□ -2.12
VPS54YDR027C PET309P32522 965 aaPredicted RBP1.8□□□□□ -2.12
VPS54YDR027C RPN11P43588 306 aaKnown RBP1.8□□□□□ -2.12
VPS54YDR027C VPS25P47142 202 aa1.8□□□□□ -2.12
VPS54YDR027C PEX14P53112 341 aa1.8□□□□□ -2.12
VPS54YDR027C ACS1Q01574 713 aa1.8□□□□□ -2.12
VPS54YDR027C GPN2Q08726 347 aaPredicted RBP1.8□□□□□ -2.12
VPS54YDR027C YMR230W-AQ3E7B5 62 aa1.8□□□□□ -2.12
VPS54YDR027C MPD2Q99316 277 aa1.8□□□□□ -2.12
VPS54YDR027C YCR061WP25639 631 aa1.8□□□□□ -2.12
VPS54YDR027C SIP1P32578 815 aa1.8□□□□□ -2.12
VPS54YDR027C RPF2P36160 344 aaKnown RBP1.8□□□□□ -2.12
VPS54YDR027C GSM1P42950 618 aa1.8□□□□□ -2.12
VPS54YDR027C LYS4P49367 693 aaPredicted RBP1.8□□□□□ -2.12
VPS54YDR027C FMP42Q04991 504 aa1.8□□□□□ -2.12
VPS54YDR027C PTC6P25646 442 aa1.79□□□□□ -2.12
VPS54YDR027C GSH1P32477 678 aa1.79□□□□□ -2.12
VPS54YDR027C YOX1P34161 385 aa1.79□□□□□ -2.12
VPS54YDR027C YBR139WP38109 508 aa1.79□□□□□ -2.12
VPS54YDR027C PCL6P40038 420 aa1.79□□□□□ -2.12
VPS54YDR027C NIT2P47016 307 aa1.79□□□□□ -2.12
VPS54YDR027C ECM16Q04217 1267 aaKnown RBP1.79□□□□□ -2.12
VPS54YDR027C PDR8Q06149 701 aa1.79□□□□□ -2.12
VPS54YDR027C THI3Q07471 609 aa1.79□□□□□ -2.12
VPS54YDR027C TIP41Q12199 356 aa1.79□□□□□ -2.12
VPS54YDR027C TMA7Q3E764 64 aaKnown RBP1.79□□□□□ -2.12
VPS54YDR027C TOP1P04786 769 aa1.79□□□□□ -2.12
VPS54YDR027C CTT1P06115 562 aa1.79□□□□□ -2.12
VPS54YDR027C BZZ1P38822 633 aa1.79□□□□□ -2.12
VPS54YDR027C SSP120P39931 234 aaKnown RBP1.79□□□□□ -2.12
VPS54YDR027C EAF5P39995 279 aa1.79□□□□□ -2.12
Retrieved 100 of 5,963 RNA–protein pairs in 17.6 ms