RNA–Protein interactions for RNA: YDL088C

ASM4, Transcript of FG-nucleoporin component of central core of nuclear pore complex (NPC), yeast

Gene ASM4, Length 1,587 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ASM4	YDL088C	ECI1	Q05871	280 aa		3.19	□□□□□ -1.9
ASM4	YDL088C	PIG1	Q06216	648 aa		3.19	□□□□□ -1.9
ASM4	YDL088C	FRE3	Q08905	711 aa		3.19	□□□□□ -1.9
ASM4	YDL088C	MRP2	P10663	115 aa	Predicted RBP	3.18	□□□□□ -1.9
ASM4	YDL088C	MRC1	P25588	1096 aa		3.18	□□□□□ -1.9
ASM4	YDL088C	PPZ1	P26570	692 aa		3.18	□□□□□ -1.9
ASM4	YDL088C	GCD7	P32502	381 aa	Predicted RBP	3.18	□□□□□ -1.9
ASM4	YDL088C	MAD3	P47074	515 aa		3.18	□□□□□ -1.9
ASM4	YDL088C	YMR317W	Q04893	1140 aa		3.18	□□□□□ -1.9
ASM4	YDL088C	SCW10	Q04951	389 aa		3.18	□□□□□ -1.9
ASM4	YDL088C	YLR049C	Q12110	428 aa		3.18	□□□□□ -1.9
ASM4	YDL088C	FMP46	P36141	133 aa	Known RBP	3.17	□□□□□ -1.9
ASM4	YDL088C	TIP41	Q12199	356 aa		3.17	□□□□□ -1.9
ASM4	YDL088C	NOP1	P15646	327 aa	Known RBP	3.17	□□□□□ -1.9
ASM4	YDL088C	URK1	P27515	501 aa		3.17	□□□□□ -1.9
ASM4	YDL088C	BZZ1	P38822	633 aa		3.17	□□□□□ -1.9
ASM4	YDL088C	STT3	P39007	718 aa	Known RBP	3.17	□□□□□ -1.9
ASM4	YDL088C	CEG1	Q01159	459 aa	Predicted RBP	3.17	□□□□□ -1.9
ASM4	YDL088C	GTB1	Q04924	702 aa		3.17	□□□□□ -1.9
ASM4	YDL088C	CBP1	P07252	654 aa		3.16	□□□□□ -1.9
ASM4	YDL088C	YND1	P40009	630 aa		3.16	□□□□□ -1.9
ASM4	YDL088C	ASG1	P40467	964 aa		3.16	□□□□□ -1.9
ASM4	YDL088C	PSP1	P50896	841 aa	Known RBP	3.16	□□□□□ -1.9
ASM4	YDL088C	HOS2	P53096	452 aa	Predicted RBP	3.16	□□□□□ -1.9
ASM4	YDL088C	EAF7	P53911	425 aa	Known RBP	3.16	□□□□□ -1.9
ASM4	YDL088C	ADE16	P54113	591 aa	Known RBP	3.16	□□□□□ -1.9
ASM4	YDL088C	MTG1	Q03151	367 aa	Predicted RBP	3.16	□□□□□ -1.9
ASM4	YDL088C	CAC2	Q04199	468 aa		3.16	□□□□□ -1.9
ASM4	YDL088C	TAH18	Q12181	623 aa		3.16	□□□□□ -1.9
ASM4	YDL088C	YER145C-A	A0A023PYF4	145 aa		3.15	□□□□□ -1.91
ASM4	YDL088C	GPA1	P08539	472 aa		3.15	□□□□□ -1.91
ASM4	YDL088C	PET122	P10355	254 aa		3.15	□□□□□ -1.91
ASM4	YDL088C	POL3	P15436	1097 aa		3.15	□□□□□ -1.91
ASM4	YDL088C	SIR1	P21691	654 aa		3.15	□□□□□ -1.91
ASM4	YDL088C	RIT1	P23796	513 aa		3.15	□□□□□ -1.91
ASM4	YDL088C	FRD1	P32614	470 aa	Known RBP	3.15	□□□□□ -1.91
ASM4	YDL088C	YNL234W	P53857	426 aa		3.15	□□□□□ -1.91
ASM4	YDL088C	ESBP6	P53918	673 aa		3.15	□□□□□ -1.91
ASM4	YDL088C	ARP9	Q05123	467 aa		3.15	□□□□□ -1.91
ASM4	YDL088C	DJP1	P40564	432 aa		3.14	□□□□□ -1.91
ASM4	YDL088C	MSY1	P48527	492 aa		3.14	□□□□□ -1.91
ASM4	YDL088C	TAM41	P53230	385 aa		3.14	□□□□□ -1.91
ASM4	YDL088C	BAG7	Q12128	409 aa		3.14	□□□□□ -1.91
ASM4	YDL088C	YOL114C	Q12322	202 aa		3.14	□□□□□ -1.91
ASM4	YDL088C	ADE3	P07245	946 aa	Known RBP	3.13	□□□□□ -1.91
ASM4	YDL088C	RFA2	P26754	273 aa	Known RBP	3.13	□□□□□ -1.91
ASM4	YDL088C	TEP1	P53916	434 aa		3.13	□□□□□ -1.91
ASM4	YDL088C	YMR254C	Q04838	102 aa		3.13	□□□□□ -1.91
ASM4	YDL088C	UTP21	Q06078	939 aa	Predicted RBP	3.13	□□□□□ -1.91
ASM4	YDL088C	IWR1	Q07532	353 aa	Predicted RBP	3.13	□□□□□ -1.91
ASM4	YDL088C	SUL2	Q12325	893 aa		3.13	□□□□□ -1.91
ASM4	YDL088C	SSB1	P11484	613 aa	Known RBP	3.12	□□□□□ -1.91
ASM4	YDL088C	SSB2	P40150	613 aa	Known RBP	3.12	□□□□□ -1.91
ASM4	YDL088C	YNL181W	P53878	407 aa		3.12	□□□□□ -1.91
ASM4	YDL088C	YLR455W	Q06188	304 aa		3.12	□□□□□ -1.91
ASM4	YDL088C	MIS1	P09440	975 aa	Known RBP	3.12	□□□□□ -1.91
ASM4	YDL088C	SWI4	P25302	1093 aa	Known RBP	3.12	□□□□□ -1.91
ASM4	YDL088C	APM3	P38153	483 aa		3.12	□□□□□ -1.91
ASM4	YDL088C	PHM8	P40025	321 aa		3.12	□□□□□ -1.91
ASM4	YDL088C	IML2	P47031	731 aa		3.12	□□□□□ -1.91
ASM4	YDL088C	ZAP1	P47043	880 aa		3.12	□□□□□ -1.91
ASM4	YDL088C	PFA5	Q03289	374 aa		3.12	□□□□□ -1.91
ASM4	YDL088C	SND1	Q04007	877 aa		3.12	□□□□□ -1.91
ASM4	YDL088C	RTT103	Q05543	409 aa		3.12	□□□□□ -1.91
ASM4	YDL088C	MCP2	Q06567	569 aa		3.12	□□□□□ -1.91
ASM4	YDL088C	ATG23	Q06671	453 aa		3.12	□□□□□ -1.91
ASM4	YDL088C	APL5	Q08951	932 aa	Known RBP	3.12	□□□□□ -1.91
ASM4	YDL088C	YMR230W-A	Q3E7B5	62 aa		3.12	□□□□□ -1.91
ASM4	YDL088C	MPD2	Q99316	277 aa		3.12	□□□□□ -1.91
ASM4	YDL088C	SST2	P11972	698 aa	Known RBP	3.11	□□□□□ -1.91
ASM4	YDL088C	GUK1	P15454	187 aa	Known RBP	3.11	□□□□□ -1.91
ASM4	YDL088C	HNM1	P19807	563 aa		3.11	□□□□□ -1.91
ASM4	YDL088C	ARP2	P32381	391 aa	Known RBP	3.11	□□□□□ -1.91
ASM4	YDL088C	ADE17	P38009	592 aa	Known RBP	3.11	□□□□□ -1.91
ASM4	YDL088C	TAN1	P53072	289 aa	Predicted RBP	3.11	□□□□□ -1.91
ASM4	YDL088C	CRZ1	P53968	678 aa		3.11	□□□□□ -1.91
ASM4	YDL088C	YDR415C	Q04033	374 aa	Predicted RBP	3.11	□□□□□ -1.91
ASM4	YDL088C	STP3	Q05937	343 aa		3.11	□□□□□ -1.91
ASM4	YDL088C	MCM3	P24279	971 aa	Known RBP	3.1	□□□□□ -1.91
ASM4	YDL088C	RAD24	P32641	659 aa		3.1	□□□□□ -1.91
ASM4	YDL088C	BUD16	P39988	312 aa		3.1	□□□□□ -1.91
ASM4	YDL088C	DCP2	P53550	970 aa	Known RBP	3.1	□□□□□ -1.91
ASM4	YDL088C	HIM1	Q06674	414 aa		3.1	□□□□□ -1.91
ASM4	YDL088C	SWA2	Q06677	668 aa		3.1	□□□□□ -1.91
ASM4	YDL088C	PCT1	P13259	424 aa		3.09	□□□□□ -1.91
ASM4	YDL088C	MGR1	P25573	417 aa		3.09	□□□□□ -1.91
ASM4	YDL088C	TRS65	P32893	560 aa		3.09	□□□□□ -1.91
ASM4	YDL088C	UBP13	P38187	747 aa		3.09	□□□□□ -1.91
ASM4	YDL088C	FAF1	P40546	346 aa	Predicted RBP	3.09	□□□□□ -1.91
ASM4	YDL088C	PIF1	P07271	859 aa		3.08	□□□□□ -1.92
ASM4	YDL088C	LRE1	P25579	583 aa	Known RBP	3.08	□□□□□ -1.92
ASM4	YDL088C	PDR3	P33200	976 aa		3.08	□□□□□ -1.92
ASM4	YDL088C	YKL133C	P36066	463 aa		3.08	□□□□□ -1.92
ASM4	YDL088C	EFM2	P38347	419 aa		3.08	□□□□□ -1.92
ASM4	YDL088C	YIL161W	P40449	235 aa	Known RBP	3.08	□□□□□ -1.92
ASM4	YDL088C	TGL2	P54857	326 aa		3.08	□□□□□ -1.92
ASM4	YDL088C	SWT1	Q12104	458 aa		3.08	□□□□□ -1.92
ASM4	YDL088C	CDC23	P16522	626 aa		3.08	□□□□□ -1.92
ASM4	YDL088C	LHS1	P36016	881 aa		3.08	□□□□□ -1.92
ASM4	YDL088C	YPK3	P38070	525 aa		3.08	□□□□□ -1.92

Retrieved 100 of 5,963 RNA–protein pairs in 17.8 ms