RNA–Protein interactions for RNA: YBR182C

SMP1, Transcript of MADS-box transcription factor involved in osmotic stress response, yeast

Gene SMP1, Length 1,359 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SMP1	YBR182C	OAZ1	Q02803	292 aa		5.22	□□□□□ -1.57
SMP1	YBR182C	PLB2	Q03674	706 aa		5.22	□□□□□ -1.57
SMP1	YBR182C	GYL1	Q04322	720 aa		5.22	□□□□□ -1.57
SMP1	YBR182C	YEH1	Q07804	573 aa		5.22	□□□□□ -1.57
SMP1	YBR182C	RLP24	Q07915	199 aa	Known RBP	5.22	□□□□□ -1.57
SMP1	YBR182C	YOL159C-A	Q3E769	90 aa		5.22	□□□□□ -1.57
SMP1	YBR182C	KAR3	P17119	729 aa		5.21	□□□□□ -1.58
SMP1	YBR182C	CLB1	P24868	471 aa		5.21	□□□□□ -1.58
SMP1	YBR182C	POL4	P25615	582 aa		5.21	□□□□□ -1.58
SMP1	YBR182C	CDC15	P27636	974 aa		5.21	□□□□□ -1.58
SMP1	YBR182C	MGM1	P32266	881 aa		5.21	□□□□□ -1.58
SMP1	YBR182C	MET28	P40573	187 aa		5.21	□□□□□ -1.58
SMP1	YBR182C	ZIM17	P42844	174 aa		5.21	□□□□□ -1.58
SMP1	YBR182C	MTL1	P53214	551 aa		5.21	□□□□□ -1.58
SMP1	YBR182C	HOF1	Q05080	669 aa		5.21	□□□□□ -1.58
SMP1	YBR182C	ATG23	Q06671	453 aa		5.21	□□□□□ -1.58
SMP1	YBR182C	HMI1	Q12039	706 aa		5.21	□□□□□ -1.58
SMP1	YBR182C	NPC2	Q12408	173 aa		5.21	□□□□□ -1.58
SMP1	YBR182C	YRF1-4	O13559	1382 aa		5.2	□□□□□ -1.58
SMP1	YBR182C	PRP28	P23394	588 aa		5.2	□□□□□ -1.58
SMP1	YBR182C	URK1	P27515	501 aa		5.2	□□□□□ -1.58
SMP1	YBR182C	BCS1	P32839	456 aa		5.2	□□□□□ -1.58
SMP1	YBR182C	OTU2	P38747	307 aa	Known RBP	5.2	□□□□□ -1.58
SMP1	YBR182C	NUP60	P39705	539 aa		5.2	□□□□□ -1.58
SMP1	YBR182C	IME4	P41833	600 aa		5.2	□□□□□ -1.58
SMP1	YBR182C	SAE2	P46946	345 aa		5.2	□□□□□ -1.58
SMP1	YBR182C	YGR054W	P53235	642 aa	Known RBP	5.2	□□□□□ -1.58
SMP1	YBR182C	SEC5	P89102	971 aa		5.2	□□□□□ -1.58
SMP1	YBR182C	SLU7	Q02775	382 aa	Known RBP	5.2	□□□□□ -1.58
SMP1	YBR182C	CRF1	Q04930	467 aa		5.2	□□□□□ -1.58
SMP1	YBR182C	STP3	Q05937	343 aa		5.2	□□□□□ -1.58
SMP1	YBR182C	CUE5	Q08412	411 aa	Known RBP	5.2	□□□□□ -1.58
SMP1	YBR182C	FRE5	Q08908	694 aa		5.2	□□□□□ -1.58
SMP1	YBR182C	STE12	P13574	688 aa		5.19	□□□□□ -1.58
SMP1	YBR182C	MDH1	P17505	334 aa	Known RBP RIP-Chip data	5.19	□□□□□ -1.58	not detected
SMP1	YBR182C	EMC1	P25574	760 aa		5.19	□□□□□ -1.58
SMP1	YBR182C	YCR051W	P25631	222 aa		5.19	□□□□□ -1.58
SMP1	YBR182C	YCR061W	P25639	631 aa		5.19	□□□□□ -1.58
SMP1	YBR182C	PAP1	P29468	568 aa	Known RBP	5.19	□□□□□ -1.58
SMP1	YBR182C	NTH1	P32356	751 aa		5.19	□□□□□ -1.58
SMP1	YBR182C	TRM2	P33753	639 aa		5.19	□□□□□ -1.58
SMP1	YBR182C	YJL206C	P39529	758 aa		5.19	□□□□□ -1.58
SMP1	YBR182C	EOS1	P53938	366 aa		5.19	□□□□□ -1.58
SMP1	YBR182C	PRP42	Q03776	544 aa	Known RBP	5.19	□□□□□ -1.58
SMP1	YBR182C	ACK1	Q07622	623 aa	Predicted RBP	5.19	□□□□□ -1.58
SMP1	YBR182C	NOP12	Q08208	459 aa	Known RBP	5.19	□□□□□ -1.58
SMP1	YBR182C	YOR019W	Q99248	730 aa		5.19	□□□□□ -1.58
SMP1	YBR182C	CET1	O13297	549 aa	Predicted RBP	5.18	□□□□□ -1.58
SMP1	YBR182C	YBR085C-A	O43137	85 aa		5.18	□□□□□ -1.58
SMP1	YBR182C	RRP7	P25368	297 aa	Predicted RBP	5.18	□□□□□ -1.58
SMP1	YBR182C	SRB5	P32585	307 aa		5.18	□□□□□ -1.58
SMP1	YBR182C	AGP2	P38090	596 aa		5.18	□□□□□ -1.58
SMP1	YBR182C	CST26	P38226	397 aa		5.18	□□□□□ -1.58
SMP1	YBR182C	BUD16	P39988	312 aa		5.18	□□□□□ -1.58
SMP1	YBR182C	DOT5	P40553	215 aa		5.18	□□□□□ -1.58
SMP1	YBR182C	THI6	P41835	540 aa		5.18	□□□□□ -1.58
SMP1	YBR182C	AMA1	P50082	593 aa		5.18	□□□□□ -1.58
SMP1	YBR182C	MRPS35	P53292	345 aa		5.18	□□□□□ -1.58
SMP1	YBR182C	YML037C	Q03703	340 aa		5.18	□□□□□ -1.58
SMP1	YBR182C	VTI1	Q04338	217 aa		5.18	□□□□□ -1.58
SMP1	YBR182C	CHS5	Q12114	671 aa	Known RBP	5.18	□□□□□ -1.58
SMP1	YBR182C	NFI1	Q12216	726 aa		5.18	□□□□□ -1.58
SMP1	YBR182C	YPT6	Q99260	215 aa		5.18	□□□□□ -1.58
SMP1	YBR182C	LAT1	P12695	482 aa	Known RBP	5.17	□□□□□ -1.58
SMP1	YBR182C	APE1	P14904	514 aa		5.17	□□□□□ -1.58
SMP1	YBR182C	PDE1	P22434	369 aa		5.17	□□□□□ -1.58
SMP1	YBR182C	CAD1	P24813	409 aa	Known RBP	5.17	□□□□□ -1.58
SMP1	YBR182C	LRE1	P25579	583 aa	Known RBP	5.17	□□□□□ -1.58
SMP1	YBR182C	SWH1	P35845	1188 aa		5.17	□□□□□ -1.58
SMP1	YBR182C	FTH1	P38310	465 aa		5.17	□□□□□ -1.58
SMP1	YBR182C	ERC1	P38767	581 aa		5.17	□□□□□ -1.58
SMP1	YBR182C	RRF1	P38771	230 aa		5.17	□□□□□ -1.58
SMP1	YBR182C	LNP1	P38878	278 aa		5.17	□□□□□ -1.58
SMP1	YBR182C	YIR042C	P40586	236 aa		5.17	□□□□□ -1.58
SMP1	YBR182C	FKH2	P41813	862 aa		5.17	□□□□□ -1.58
SMP1	YBR182C	BAP3	P41815	604 aa		5.17	□□□□□ -1.58
SMP1	YBR182C	FYV8	P46949	817 aa	Known RBP	5.17	□□□□□ -1.58
SMP1	YBR182C	RFX1	P48743	811 aa		5.17	□□□□□ -1.58
SMP1	YBR182C	MCM6	P53091	1017 aa	Known RBP	5.17	□□□□□ -1.58
SMP1	YBR182C	LCL3	P53153	274 aa		5.17	□□□□□ -1.58
SMP1	YBR182C	VPS62	P53285	467 aa		5.17	□□□□□ -1.58
SMP1	YBR182C	BNI5	P53890	448 aa	Known RBP	5.17	□□□□□ -1.58
SMP1	YBR182C	GTB1	Q04924	702 aa		5.17	□□□□□ -1.58
SMP1	YBR182C	DUS4	Q06063	367 aa		5.17	□□□□□ -1.58
SMP1	YBR182C	SPE4	Q12455	300 aa		5.17	□□□□□ -1.58
SMP1	YBR182C	FRE6	Q12473	712 aa		5.17	□□□□□ -1.58
SMP1	YBR182C	SKS1	Q12505	502 aa		5.17	□□□□□ -1.58
SMP1	YBR182C	YBR255C-A	Q3E776	120 aa		5.17	□□□□□ -1.58
SMP1	YBR182C	GLK1	P17709	500 aa	Known RBP	5.16	□□□□□ -1.58
SMP1	YBR182C	CPR2	P23285	205 aa		5.16	□□□□□ -1.58
SMP1	YBR182C	URA7	P28274	579 aa	Known RBP	5.16	□□□□□ -1.58
SMP1	YBR182C	GEX2	P36173	615 aa		5.16	□□□□□ -1.58
SMP1	YBR182C	FMO1	P38866	432 aa		5.16	□□□□□ -1.58
SMP1	YBR182C	MNN10	P50108	393 aa	Known RBP	5.16	□□□□□ -1.58
SMP1	YBR182C	YDR239C	Q03780	787 aa		5.16	□□□□□ -1.58
SMP1	YBR182C	GIS1	Q03833	894 aa		5.16	□□□□□ -1.58
SMP1	YBR182C	BUD22	Q04347	519 aa	Known RBP	5.16	□□□□□ -1.58
SMP1	YBR182C	VPS38	Q05919	439 aa		5.16	□□□□□ -1.58
SMP1	YBR182C	ATG29	Q12092	213 aa		5.16	□□□□□ -1.58
SMP1	YBR182C	TY1B-A	O13527	1196 aa	Known RBP	5.16	□□□□□ -1.58

Retrieved 100 of 5,963 RNA–protein pairs in 165.2 ms