RNA–Protein interactions for RNA: YBL067C

UBP13, Transcript of Ubiquitin-specific protease that cleaves Ub-protein fusions, yeast

Gene UBP13, Length 2,244 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UBP13	YBL067C	NFS1	P25374	497 aa		7.21	□□□□□ -1.26
UBP13	YBL067C	AKL1	P38080	1108 aa	Known RBP	7.21	□□□□□ -1.26
UBP13	YBL067C	RRT2	P38332	387 aa		7.21	□□□□□ -1.26
UBP13	YBL067C	TOM71	P38825	639 aa	Known RBP	7.21	□□□□□ -1.26
UBP13	YBL067C	YHB1	P39676	399 aa	Known RBP	7.21	□□□□□ -1.26
UBP13	YBL067C	GIP4	P39732	760 aa		7.21	□□□□□ -1.26
UBP13	YBL067C	PFK26	P40433	827 aa	Known RBP	7.21	□□□□□ -1.26
UBP13	YBL067C	YIL089W	P40500	205 aa		7.21	□□□□□ -1.26
UBP13	YBL067C	HSH155	P49955	971 aa	Known RBP	7.21	□□□□□ -1.26
UBP13	YBL067C	GLO1	P50107	326 aa		7.21	□□□□□ -1.26
UBP13	YBL067C	YNL143C	P53908	130 aa		7.21	□□□□□ -1.26
UBP13	YBL067C	KTR6	P54070	446 aa		7.21	□□□□□ -1.26
UBP13	YBL067C	MAK10	Q02197	733 aa		7.21	□□□□□ -1.26
UBP13	YBL067C	CRR1	Q05790	422 aa		7.21	□□□□□ -1.26
UBP13	YBL067C	HBT1	Q07653	1046 aa	Known RBP	7.21	□□□□□ -1.26
UBP13	YBL067C	SFG1	Q12507	346 aa		7.21	□□□□□ -1.26
UBP13	YBL067C	RPS17A	P02407	136 aa	Known RBP	7.2	□□□□□ -1.26
UBP13	YBL067C	URA3	P03962	267 aa		7.2	□□□□□ -1.26
UBP13	YBL067C	RAP1	P11938	827 aa		7.2	□□□□□ -1.26
UBP13	YBL067C	RPS17B	P14127	136 aa	Known RBP	7.2	□□□□□ -1.26
UBP13	YBL067C	PRD1	P25375	712 aa		7.2	□□□□□ -1.26
UBP13	YBL067C	AFG1	P32317	509 aa		7.2	□□□□□ -1.26
UBP13	YBL067C	STV1	P37296	890 aa		7.2	□□□□□ -1.26
UBP13	YBL067C	SLZ1	P40167	298 aa		7.2	□□□□□ -1.26
UBP13	YBL067C	EGD1	Q02642	157 aa	Known RBP	7.2	□□□□□ -1.26
UBP13	YBL067C	MRPS17	Q03246	237 aa	Predicted RBP	7.2	□□□□□ -1.26
UBP13	YBL067C	SSL1	Q04673	461 aa	Predicted RBP	7.2	□□□□□ -1.26
UBP13	YBL067C	SUL2	Q12325	893 aa		7.2	□□□□□ -1.26
UBP13	YBL067C	MRP10	O75012	95 aa		7.2	□□□□□ -1.26
UBP13	YBL067C	TY2A-LR1	P0C2J4	438 aa		7.2	□□□□□ -1.26
UBP13	YBL067C	TY2A-F	P0CX61	438 aa		7.2	□□□□□ -1.26
UBP13	YBL067C	TY2A-GR2	P0CX62	438 aa		7.2	□□□□□ -1.26
UBP13	YBL067C	ARG1	P22768	420 aa		7.2	□□□□□ -1.26
UBP13	YBL067C	TY2A-C	P25383	438 aa		7.2	□□□□□ -1.26
UBP13	YBL067C	EMC1	P25574	760 aa		7.2	□□□□□ -1.26
UBP13	YBL067C	SLX1	P38324	304 aa		7.2	□□□□□ -1.26
UBP13	YBL067C	SET5	P38890	526 aa	Known RBP	7.2	□□□□□ -1.26
UBP13	YBL067C	NIT3	P49954	291 aa		7.2	□□□□□ -1.26
UBP13	YBL067C	BIO5	P53744	561 aa	Known RBP	7.2	□□□□□ -1.26
UBP13	YBL067C	MEC3	Q02574	474 aa		7.2	□□□□□ -1.26
UBP13	YBL067C	TY2A-DR2	Q03483	438 aa		7.2	□□□□□ -1.26
UBP13	YBL067C	SEG1	Q04279	960 aa		7.2	□□□□□ -1.26
UBP13	YBL067C	RBS1	Q05672	457 aa	Known RBP	7.2	□□□□□ -1.26
UBP13	YBL067C	GSH2	Q08220	491 aa		7.2	□□□□□ -1.26
UBP13	YBL067C	TY2A-B	Q12260	438 aa		7.2	□□□□□ -1.26
UBP13	YBL067C	TY2A-OR2	Q12293	438 aa		7.2	□□□□□ -1.26
UBP13	YBL067C	TY2A-DR1	Q12392	438 aa		7.2	□□□□□ -1.26
UBP13	YBL067C	TY2A-OR1	Q12439	438 aa		7.2	□□□□□ -1.26
UBP13	YBL067C	TY2A-DR3	Q99303	438 aa		7.2	□□□□□ -1.26
UBP13	YBL067C	ERG8	P24521	451 aa		7.19	□□□□□ -1.26
UBP13	YBL067C	YCR061W	P25639	631 aa		7.19	□□□□□ -1.26
UBP13	YBL067C	COT1	P32798	439 aa		7.19	□□□□□ -1.26
UBP13	YBL067C	SEF1	P34228	1148 aa		7.19	□□□□□ -1.26
UBP13	YBL067C	GEX2	P36173	615 aa		7.19	□□□□□ -1.26
UBP13	YBL067C	GIC1	P38785	314 aa		7.19	□□□□□ -1.26
UBP13	YBL067C	SLN1	P39928	1220 aa	Predicted RBP	7.19	□□□□□ -1.26
UBP13	YBL067C	JHD1	P40034	492 aa		7.19	□□□□□ -1.26
UBP13	YBL067C	DOT5	P40553	215 aa		7.19	□□□□□ -1.26
UBP13	YBL067C	RCO1	Q04779	684 aa		7.19	□□□□□ -1.26
UBP13	YBL067C	RSB1	Q08417	382 aa		7.19	□□□□□ -1.26
UBP13	YBL067C	RIM20	Q12033	661 aa		7.19	□□□□□ -1.26
UBP13	YBL067C	CDC36	P06100	191 aa	Predicted RBP	7.19	□□□□□ -1.26
UBP13	YBL067C	IMG2	P25642	146 aa	Predicted RBP	7.19	□□□□□ -1.26
UBP13	YBL067C	PRO1	P32264	428 aa		7.19	□□□□□ -1.26
UBP13	YBL067C	YBR139W	P38109	508 aa		7.19	□□□□□ -1.26
UBP13	YBL067C	SIP3	P38717	1229 aa		7.19	□□□□□ -1.26
UBP13	YBL067C	SDS3	P40505	327 aa		7.19	□□□□□ -1.26
UBP13	YBL067C	MSS2	P40990	351 aa		7.19	□□□□□ -1.26
UBP13	YBL067C	CAK1	P43568	368 aa	Predicted RBP	7.19	□□□□□ -1.26
UBP13	YBL067C	PNC1	P53184	216 aa	Known RBP	7.19	□□□□□ -1.26
UBP13	YBL067C	NCE103	P53615	221 aa		7.19	□□□□□ -1.26
UBP13	YBL067C	CSL4	P53859	292 aa	Predicted RBP	7.19	□□□□□ -1.26
UBP13	YBL067C	PPN1	Q04119	674 aa		7.19	□□□□□ -1.26
UBP13	YBL067C	VPS63	O13549	108 aa		7.18	□□□□□ -1.26
UBP13	YBL067C	TPK2	P06245	380 aa		7.18	□□□□□ -1.26
UBP13	YBL067C	PET127	P32606	800 aa		7.18	□□□□□ -1.26
UBP13	YBL067C	SFB3	P38810	929 aa		7.18	□□□□□ -1.26
UBP13	YBL067C	MPT5	P39016	859 aa	Known RBP RIP-Chip data	7.18	□□□□□ -1.26	not detected
UBP13	YBL067C	YER156C	P40093	338 aa	Known RBP	7.18	□□□□□ -1.26
UBP13	YBL067C	RCM1	P53972	490 aa		7.18	□□□□□ -1.26
UBP13	YBL067C	HDA1	P53973	706 aa		7.18	□□□□□ -1.26
UBP13	YBL067C	ORC4	P54791	529 aa		7.18	□□□□□ -1.26
UBP13	YBL067C	FBP1	P09201	348 aa		7.17	□□□□□ -1.26
UBP13	YBL067C	TUB3	P09734	445 aa	Known RBP	7.17	□□□□□ -1.26
UBP13	YBL067C	PRP2	P20095	876 aa	Predicted RBP	7.17	□□□□□ -1.26
UBP13	YBL067C	BUD8	P41698	603 aa		7.17	□□□□□ -1.26
UBP13	YBL067C	LIA1	P47120	325 aa	Known RBP	7.17	□□□□□ -1.26
UBP13	YBL067C	TAM41	P53230	385 aa		7.17	□□□□□ -1.26
UBP13	YBL067C	YGR111W	P53265	400 aa		7.17	□□□□□ -1.26
UBP13	YBL067C	SSQ1	Q05931	657 aa	Predicted RBP	7.17	□□□□□ -1.26
UBP13	YBL067C	VAM6	Q07468	1049 aa		7.17	□□□□□ -1.26
UBP13	YBL067C	THI21	Q08975	551 aa		7.17	□□□□□ -1.26
UBP13	YBL067C	ATG11	Q12527	1178 aa		7.17	□□□□□ -1.26
UBP13	YBL067C	YLR302C	O13544	120 aa		7.17	□□□□□ -1.26
UBP13	YBL067C	CBP2	P03874	630 aa	Predicted RBP	7.17	□□□□□ -1.26
UBP13	YBL067C	TAL1	P15019	335 aa	Known RBP	7.17	□□□□□ -1.26
UBP13	YBL067C	PAP1	P29468	568 aa	Known RBP	7.17	□□□□□ -1.26
UBP13	YBL067C	RPC82	P32349	654 aa		7.17	□□□□□ -1.26
UBP13	YBL067C	BMH2	P34730	273 aa	Known RBP	7.17	□□□□□ -1.26
UBP13	YBL067C	ALY1	P36117	915 aa		7.17	□□□□□ -1.26

Retrieved 100 of 5,963 RNA–protein pairs in 20.2 ms