RNA–Protein interactions for RNA: YBL006C

LDB7, Transcript of Component of the RSC chromatin remodeling complex, yeastyeast

Gene LDB7, Length 543 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LDB7YBL006C SWC4P53201 476 aa6.94□□□□□ -1.3
LDB7YBL006C YNL143CP53908 130 aa6.94□□□□□ -1.3
LDB7YBL006C YLR456WQ06199 204 aa6.94□□□□□ -1.3
LDB7YBL006C YLR149CQ99296 730 aa6.94□□□□□ -1.3
LDB7YBL006C AI5_ALPHAQ9ZZX1 630 aa6.94□□□□□ -1.3
LDB7YBL006C MEC1P38111 2368 aa6.94□□□□□ -1.3
LDB7YBL006C GAL4P04386 881 aa6.93□□□□□ -1.3
LDB7YBL006C YKR104WP0CE69 306 aa6.93□□□□□ -1.3
LDB7YBL006C GLN4P13188 809 aaKnown RBP6.93□□□□□ -1.3
LDB7YBL006C TEC1P18412 486 aa6.93□□□□□ -1.3
LDB7YBL006C UBA1P22515 1024 aaKnown RBP6.93□□□□□ -1.3
LDB7YBL006C SNT1P25357 1226 aa6.93□□□□□ -1.3
LDB7YBL006C DCC1P25559 380 aa6.93□□□□□ -1.3
LDB7YBL006C SFP1P32432 683 aa6.93□□□□□ -1.3
LDB7YBL006C MIC60P36112 540 aa6.93□□□□□ -1.3
LDB7YBL006C PCH2P38126 564 aa6.93□□□□□ -1.3
LDB7YBL006C MUM2P38236 366 aa6.93□□□□□ -1.3
LDB7YBL006C ECM2P38241 364 aaKnown RBP6.93□□□□□ -1.3
LDB7YBL006C MSR1P38714 643 aa6.93□□□□□ -1.3
LDB7YBL006C TES1P41903 349 aaKnown RBP6.93□□□□□ -1.3
LDB7YBL006C RGD2P43556 714 aa6.93□□□□□ -1.3
LDB7YBL006C ALF1P53904 254 aa6.93□□□□□ -1.3
LDB7YBL006C SIW14P53965 281 aa6.93□□□□□ -1.3
LDB7YBL006C MET14Q02196 202 aa6.93□□□□□ -1.3
LDB7YBL006C YDR132CQ03900 495 aa6.93□□□□□ -1.3
LDB7YBL006C YDR444WQ04093 687 aa6.93□□□□□ -1.3
LDB7YBL006C HBT1Q07653 1046 aaKnown RBP6.93□□□□□ -1.3
LDB7YBL006C FAP7Q12055 197 aaPredicted RBP6.93□□□□□ -1.3
LDB7YBL006C YIL046W-AQ3E7Z4 54 aa6.93□□□□□ -1.3
LDB7YBL006C FRT1Q99332 602 aa6.93□□□□□ -1.3
LDB7YBL006C TUB1P09733 447 aaKnown RBP6.92□□□□□ -1.3
LDB7YBL006C EMC1P25574 760 aa6.92□□□□□ -1.3
LDB7YBL006C UTR2P32623 467 aa6.92□□□□□ -1.3
LDB7YBL006C WBP1P33767 430 aaKnown RBP6.92□□□□□ -1.3
LDB7YBL006C TFA2P36145 328 aa6.92□□□□□ -1.3
LDB7YBL006C SRP72P38688 640 aaKnown RBP6.92□□□□□ -1.3
LDB7YBL006C END3P39013 349 aa6.92□□□□□ -1.3
LDB7YBL006C RPH1P39956 796 aa6.92□□□□□ -1.3
LDB7YBL006C SAP4P53036 818 aa6.92□□□□□ -1.3
LDB7YBL006C CTR9P89105 1077 aa6.92□□□□□ -1.3
LDB7YBL006C CDC14Q00684 551 aa6.92□□□□□ -1.3
LDB7YBL006C BNA5Q05979 453 aa6.92□□□□□ -1.3
LDB7YBL006C YLL032CQ07834 825 aaKnown RBP RIP-Chip data6.92□□□□□ -1.3not detected
LDB7YBL006C TFB4Q12004 338 aa6.92□□□□□ -1.3
LDB7YBL006C PUF4P25339 888 aaKnown RBP RIP-Chip data6.91□□□□□ -1.3 RIP-Chip
LDB7YBL006C RFA2P26754 273 aaKnown RBP6.91□□□□□ -1.3
LDB7YBL006C IML3P38265 245 aa6.91□□□□□ -1.3
LDB7YBL006C MCX1P38323 520 aaPredicted RBP6.91□□□□□ -1.3
LDB7YBL006C YBR238CP38330 731 aaKnown RBP6.91□□□□□ -1.3
LDB7YBL006C CCT6P39079 546 aa6.91□□□□□ -1.3
LDB7YBL006C ELO1P39540 310 aa6.91□□□□□ -1.3
LDB7YBL006C SEC9P40357 651 aa6.91□□□□□ -1.3
LDB7YBL006C CTK3P46963 296 aaPredicted RBP6.91□□□□□ -1.3
LDB7YBL006C FRE4P53746 719 aa6.91□□□□□ -1.3
LDB7YBL006C ARG7Q04728 441 aa6.91□□□□□ -1.3
LDB7YBL006C MCP2Q06567 569 aa6.91□□□□□ -1.3
LDB7YBL006C VPS68Q12016 184 aa6.91□□□□□ -1.3
LDB7YBL006C IOC2Q12072 812 aa6.91□□□□□ -1.3
LDB7YBL006C YSP3P25036 478 aa6.9□□□□□ -1.3
LDB7YBL006C YBR259WP38338 688 aa6.9□□□□□ -1.3
LDB7YBL006C STS1P38637 319 aa6.9□□□□□ -1.3
LDB7YBL006C CKB2P38930 258 aa6.9□□□□□ -1.3
LDB7YBL006C OSW7P43611 510 aa6.9□□□□□ -1.3
LDB7YBL006C HLJ1P48353 224 aa6.9□□□□□ -1.3
LDB7YBL006C YGL108CP53139 140 aa6.9□□□□□ -1.3
LDB7YBL006C YPR003CP53394 754 aa6.9□□□□□ -1.3
LDB7YBL006C RSC4Q02206 625 aa6.9□□□□□ -1.3
LDB7YBL006C YMR160WQ03823 816 aa6.9□□□□□ -1.3
LDB7YBL006C BMT6Q12291 365 aa6.9□□□□□ -1.3
LDB7YBL006C YPR089WO13585 888 aa6.89□□□□□ -1.31
LDB7YBL006C RIP1P08067 215 aa6.89□□□□□ -1.31
LDB7YBL006C CKI1P20485 582 aa6.89□□□□□ -1.31
LDB7YBL006C EPT1P22140 391 aa6.89□□□□□ -1.31
LDB7YBL006C PPH21P23594 369 aa6.89□□□□□ -1.31
LDB7YBL006C CWP1P28319 239 aa6.89□□□□□ -1.31
LDB7YBL006C PLC1P32383 869 aa6.89□□□□□ -1.31
LDB7YBL006C SPS19P32573 292 aaKnown RBP6.89□□□□□ -1.31
LDB7YBL006C SPR1P32603 445 aa6.89□□□□□ -1.31
LDB7YBL006C SRP101P32916 621 aa6.89□□□□□ -1.31
LDB7YBL006C DBP8P38719 431 aa6.89□□□□□ -1.31
LDB7YBL006C GND1P38720 489 aaKnown RBP6.89□□□□□ -1.31
LDB7YBL006C STN1P38960 494 aa6.89□□□□□ -1.31
LDB7YBL006C RIM8P53179 542 aa6.89□□□□□ -1.31
LDB7YBL006C NUP100Q02629 959 aa6.89□□□□□ -1.31
LDB7YBL006C RLI1Q03195 608 aaKnown RBP6.89□□□□□ -1.31
LDB7YBL006C POB3Q04636 552 aaKnown RBP6.89□□□□□ -1.31
LDB7YBL006C CIA1Q05583 330 aa6.89□□□□□ -1.31
LDB7YBL006C TRM8Q12009 286 aa6.89□□□□□ -1.31
LDB7YBL006C TGL5Q12043 749 aa6.89□□□□□ -1.31
LDB7YBL006C SMF3Q12078 473 aaPredicted RBP6.89□□□□□ -1.31
LDB7YBL006C AVL9Q12500 764 aa6.89□□□□□ -1.31
LDB7YBL006C STT4P37297 1900 aa6.89□□□□□ -1.31
LDB7YBL006C ABF1P14164 731 aa6.88□□□□□ -1.31
LDB7YBL006C APA1P16550 321 aaKnown RBP6.88□□□□□ -1.31
LDB7YBL006C SCL1P21243 252 aaKnown RBP6.88□□□□□ -1.31
LDB7YBL006C DAL82P21705 255 aa6.88□□□□□ -1.31
LDB7YBL006C TSR4P25040 408 aa6.88□□□□□ -1.31
LDB7YBL006C IMP3P32899 183 aaPredicted RBP6.88□□□□□ -1.31
LDB7YBL006C STO1P34160 861 aaKnown RBP6.88□□□□□ -1.31
LDB7YBL006C YBP1P38315 674 aa6.88□□□□□ -1.31
Retrieved 100 of 5,963 RNA–protein pairs in 32 ms