RNA–Protein interactions for RNA: YAL002W

VPS8, Transcript of Membrane-binding component of the CORVET complex, yeastyeast

Gene VPS8, Length 3,825 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS8YAL002W FTR1P40088 404 aa2.17□□□□□ -2.06
VPS8YAL002W YJL068CP40363 299 aa2.17□□□□□ -2.06
VPS8YAL002W RPS7BP48164 190 aaKnown RBP2.17□□□□□ -2.06
VPS8YAL002W TAM41P53230 385 aa2.17□□□□□ -2.06
VPS8YAL002W ARE2P53629 642 aaKnown RBP2.17□□□□□ -2.06
VPS8YAL002W NCS2P53923 493 aaPredicted RBP2.17□□□□□ -2.06
VPS8YAL002W ZDS2P54786 942 aa2.17□□□□□ -2.06
VPS8YAL002W ARG5,6Q01217 863 aa2.17□□□□□ -2.06
VPS8YAL002W YML119WQ03208 357 aa2.17□□□□□ -2.06
VPS8YAL002W ESC8Q08119 714 aa2.17□□□□□ -2.06
VPS8YAL002W CHS5Q12114 671 aaKnown RBP2.17□□□□□ -2.06
VPS8YAL002W SGT2Q12118 346 aaKnown RBP2.17□□□□□ -2.06
VPS8YAL002W NUP192P47054 1683 aa2.17□□□□□ -2.06
VPS8YAL002W GCN4P03069 281 aa2.17□□□□□ -2.06
VPS8YAL002W ARG3P05150 338 aa2.17□□□□□ -2.06
VPS8YAL002W HIS5P07172 385 aa2.17□□□□□ -2.06
VPS8YAL002W TY2A-LR1P0C2J4 438 aa2.17□□□□□ -2.06
VPS8YAL002W TY2A-FP0CX61 438 aa2.17□□□□□ -2.06
VPS8YAL002W TY2A-GR2P0CX62 438 aa2.17□□□□□ -2.06
VPS8YAL002W CAF20P12962 161 aaKnown RBP2.17□□□□□ -2.06
VPS8YAL002W PRP4P20053 465 aaKnown RBP2.17□□□□□ -2.06
VPS8YAL002W APN1P22936 367 aa2.17□□□□□ -2.06
VPS8YAL002W TY2A-CP25383 438 aa2.17□□□□□ -2.06
VPS8YAL002W DSS4P32601 143 aa2.17□□□□□ -2.06
VPS8YAL002W ALY1P36117 915 aa2.17□□□□□ -2.06
VPS8YAL002W FSH1P38777 243 aaKnown RBP2.17□□□□□ -2.06
VPS8YAL002W YJL193WP39542 402 aa2.17□□□□□ -2.06
VPS8YAL002W SSP120P39931 234 aaKnown RBP2.17□□□□□ -2.06
VPS8YAL002W PSP1P50896 841 aaKnown RBP2.17□□□□□ -2.06
VPS8YAL002W MCM6P53091 1017 aaKnown RBP2.17□□□□□ -2.06
VPS8YAL002W LAP3Q01532 483 aaKnown RBP RIP-Chip data2.17□□□□□ -2.06not detected
VPS8YAL002W TY2A-DR2Q03483 438 aa2.17□□□□□ -2.06
VPS8YAL002W HEL2Q05580 639 aaKnown RBP2.17□□□□□ -2.06
VPS8YAL002W YOR389WQ08912 624 aa2.17□□□□□ -2.06
VPS8YAL002W TY2A-BQ12260 438 aa2.17□□□□□ -2.06
VPS8YAL002W TY2A-OR2Q12293 438 aa2.17□□□□□ -2.06
VPS8YAL002W TY2A-DR1Q12392 438 aa2.17□□□□□ -2.06
VPS8YAL002W TY2A-OR1Q12439 438 aa2.17□□□□□ -2.06
VPS8YAL002W SKS1Q12505 502 aa2.17□□□□□ -2.06
VPS8YAL002W TY2A-DR3Q99303 438 aa2.17□□□□□ -2.06
VPS8YAL002W TUF1P02992 437 aaKnown RBP2.16□□□□□ -2.06
VPS8YAL002W REV7P38927 245 aa2.16□□□□□ -2.06
VPS8YAL002W NPR2P39923 615 aa2.16□□□□□ -2.06
VPS8YAL002W MAD2P40958 196 aa2.16□□□□□ -2.06
VPS8YAL002W BIT61P47041 543 aa2.16□□□□□ -2.06
VPS8YAL002W SHE10P53075 577 aa2.16□□□□□ -2.06
VPS8YAL002W NMA2P53204 395 aa2.16□□□□□ -2.06
VPS8YAL002W PIL1P53252 339 aaKnown RBP2.16□□□□□ -2.06
VPS8YAL002W TRS31Q03337 283 aa2.16□□□□□ -2.06
VPS8YAL002W YML037CQ03703 340 aa2.16□□□□□ -2.06
VPS8YAL002W YLR224WQ05947 369 aa2.16□□□□□ -2.06
VPS8YAL002W ACK1Q07622 623 aaPredicted RBP2.16□□□□□ -2.06
VPS8YAL002W MLH2Q07980 695 aa2.16□□□□□ -2.06
VPS8YAL002W REX3Q12090 404 aa2.16□□□□□ -2.06
VPS8YAL002W LPX1Q12405 387 aaKnown RBP2.16□□□□□ -2.06
VPS8YAL002W YOR019WQ99248 730 aa2.16□□□□□ -2.06
VPS8YAL002W TY3B-IQ7LHG5 1498 aaKnown RBP2.16□□□□□ -2.06
VPS8YAL002W STF1P01098 86 aa2.16□□□□□ -2.06
VPS8YAL002W EST1P17214 699 aaPredicted RBP2.16□□□□□ -2.06
VPS8YAL002W GLK1P17709 500 aaKnown RBP2.16□□□□□ -2.06
VPS8YAL002W MNE1P24720 663 aa2.16□□□□□ -2.06
VPS8YAL002W ROX1P25042 368 aa2.16□□□□□ -2.06
VPS8YAL002W SPB1P25582 841 aaPredicted RBP2.16□□□□□ -2.06
VPS8YAL002W DAL80P26343 269 aa2.16□□□□□ -2.06
VPS8YAL002W MDL1P33310 695 aa2.16□□□□□ -2.06
VPS8YAL002W VPS41P38959 992 aa2.16□□□□□ -2.06
VPS8YAL002W GET2P40056 285 aa2.16□□□□□ -2.06
VPS8YAL002W PCL7P40186 285 aa2.16□□□□□ -2.06
VPS8YAL002W LCB2P40970 561 aa2.16□□□□□ -2.06
VPS8YAL002W FYV8P46949 817 aaKnown RBP2.16□□□□□ -2.06
VPS8YAL002W SPC98P53540 846 aa2.16□□□□□ -2.06
VPS8YAL002W PRP42Q03776 544 aaKnown RBP2.16□□□□□ -2.06
VPS8YAL002W YDR239CQ03780 787 aa2.16□□□□□ -2.06
VPS8YAL002W RNH1Q04740 348 aa2.16□□□□□ -2.06
VPS8YAL002W YLR345WQ06137 509 aa2.16□□□□□ -2.06
VPS8YAL002W CUE5Q08412 411 aaKnown RBP2.16□□□□□ -2.06
VPS8YAL002W APC5Q08683 685 aa2.16□□□□□ -2.06
VPS8YAL002W DIN7Q12086 430 aa2.16□□□□□ -2.06
VPS8YAL002W USV1Q12132 391 aa2.16□□□□□ -2.06
VPS8YAL002W HRP1Q99383 534 aaKnown RBP2.16□□□□□ -2.06
VPS8YAL002W YPK1P12688 680 aaKnown RBP2.16□□□□□ -2.06
VPS8YAL002W SUI2P20459 304 aaKnown RBP2.16□□□□□ -2.06
VPS8YAL002W TRX1P22217 103 aaKnown RBP2.16□□□□□ -2.06
VPS8YAL002W CWH43P25618 953 aa2.16□□□□□ -2.06
VPS8YAL002W PRE4P30657 266 aa2.16□□□□□ -2.06
VPS8YAL002W TFB1P32776 642 aa2.16□□□□□ -2.06
VPS8YAL002W CAB3P36076 571 aa2.16□□□□□ -2.06
VPS8YAL002W MIC60P36112 540 aa2.16□□□□□ -2.06
VPS8YAL002W ARB1P40024 610 aaKnown RBP2.16□□□□□ -2.06
VPS8YAL002W SEC28P40509 296 aaKnown RBP2.16□□□□□ -2.06
VPS8YAL002W TEL2P53038 688 aa2.16□□□□□ -2.06
VPS8YAL002W HST1P53685 503 aa2.16□□□□□ -2.06
VPS8YAL002W BNI5P53890 448 aaKnown RBP2.16□□□□□ -2.06
VPS8YAL002W PEX25Q02969 394 aa2.16□□□□□ -2.06
VPS8YAL002W RMT2Q03305 412 aa2.16□□□□□ -2.06
VPS8YAL002W CLU1Q03690 1277 aaKnown RBP2.16□□□□□ -2.06
VPS8YAL002W RAD33Q04231 177 aa2.16□□□□□ -2.06
VPS8YAL002W MGR3Q04472 501 aa2.16□□□□□ -2.06
VPS8YAL002W MF(ALPHA)2P32435 120 aa2.15□□□□□ -2.06
VPS8YAL002W BFR1P38934 470 aaKnown RBP RIP-Chip data2.15□□□□□ -2.06not detected
Retrieved 100 of 5,963 RNA–protein pairs in 18.7 ms