RNA–Protein interactions for RNA: ENST00000613744.4

POLR2J3-220, Transcript of RNA polymerase II subunit J3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene POLR2J3, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-220ENST00000613744 FBXW7Q969H0 707 aa25.06■■□□□ 1.6
POLR2J3-220ENST00000613744 GNL3LQ9NVN8 582 aaKnown RBP25.06■■□□□ 1.6
POLR2J3-220ENST00000613744 ADAM21Q9UKJ8 722 aa25.06■■□□□ 1.6
POLR2J3-220ENST00000613744 COL4A5P29400 1685 aa25.06■■□□□ 1.6
POLR2J3-220ENST00000613744 ECE2O60344 883 aa25.05■■□□□ 1.6
POLR2J3-220ENST00000613744 ZAP70P43403 619 aa25.05■■□□□ 1.6
POLR2J3-220ENST00000613744 FANCCQ00597 558 aa25.05■■□□□ 1.6
POLR2J3-220ENST00000613744 SCRN1Q12765 414 aa25.05■■□□□ 1.6
POLR2J3-220ENST00000613744 DPCR1Q3MIW9 517 aa25.05■■□□□ 1.6
POLR2J3-220ENST00000613744 MAP2K7O14733 419 aa25.05■■□□□ 1.6
POLR2J3-220ENST00000613744 ARHGAP6O43182 974 aa25.05■■□□□ 1.6
POLR2J3-220ENST00000613744 TUBB4BP68371 445 aa25.05■■□□□ 1.6
POLR2J3-220ENST00000613744 COA1Q9GZY4 146 aa25.05■■□□□ 1.6
POLR2J3-220ENST00000613744 MRFAP1Q9Y605 127 aa25.05■■□□□ 1.6
POLR2J3-220ENST00000613744 UQCRFS1P1P0C7P4 283 aa25.04■■□□□ 1.6
POLR2J3-220ENST00000613744 LEKR1Q6ZMV7 388 aa25.04■■□□□ 1.6
POLR2J3-220ENST00000613744 C10orf67Q8IYJ2 551 aa25.04■■□□□ 1.6
POLR2J3-220ENST00000613744 SPATA5Q8NB90 893 aa25.04■■□□□ 1.6
POLR2J3-220ENST00000613744 HNRNPLLQ8WVV9 542 aaKnown RBP25.04■■□□□ 1.6
POLR2J3-220ENST00000613744 PAG1Q9NWQ8 432 aa25.04■■□□□ 1.6
POLR2J3-220ENST00000613744 TAF6LQ9Y6J9 622 aa25.04■■□□□ 1.6
POLR2J3-220ENST00000613744 COL1A1P02452 1464 aaPredicted RBP25.04■■□□□ 1.6
POLR2J3-220ENST00000613744 PPP2R3AQ06190 1150 aa25.03■■□□□ 1.6
POLR2J3-220ENST00000613744 GOLGA1Q92805 767 aa25.03■■□□□ 1.6
POLR2J3-220ENST00000613744 PCDHA7Q9UN72 937 aa25.03■■□□□ 1.6
POLR2J3-220ENST00000613744 CHD4Q14839 1912 aa25.03■■□□□ 1.6
POLR2J3-220ENST00000613744 POTEB2H3BUK9 544 aa25.03■■□□□ 1.6
POLR2J3-220ENST00000613744 MAPK8IP2Q13387 824 aaPredicted RBP25.03■■□□□ 1.6
POLR2J3-220ENST00000613744 ICE2Q659A1 982 aa25.03■■□□□ 1.6
POLR2J3-220ENST00000613744 IL1R1P14778 569 aa25.02■■□□□ 1.6
POLR2J3-220ENST00000613744 KCNG4Q8TDN1 519 aa25.02■■□□□ 1.6
POLR2J3-220ENST00000613744 ZCCHC17Q9NP64 241 aaKnown RBP25.02■■□□□ 1.6
POLR2J3-220ENST00000613744 CCDC88AQ3V6T2 1871 aa25.02■■□□□ 1.6
POLR2J3-220ENST00000613744 YDJCA8MPS7 323 aa25.01■■□□□ 1.59
POLR2J3-220ENST00000613744 YEATS4O95619 227 aa25.01■■□□□ 1.59
POLR2J3-220ENST00000613744 GTF2IP78347 998 aa25.01■■□□□ 1.59
POLR2J3-220ENST00000613744 PARD6BQ9BYG5 372 aa25.01■■□□□ 1.59
POLR2J3-220ENST00000613744 LTBP3Q9NS15 1303 aa25.01■■□□□ 1.59
POLR2J3-220ENST00000613744 SALL1Q9NSC2 1324 aa25.01■■□□□ 1.59
POLR2J3-220ENST00000613744 VWA3AA6NCI4 1184 aa25.01■■□□□ 1.59
POLR2J3-220ENST00000613744 SLC3A2P08195 630 aaKnown RBP25.01■■□□□ 1.59
POLR2J3-220ENST00000613744 PPIL4Q8WUA2 492 aaKnown RBP eCLIP25.01■■□□□ 1.59
POLR2J3-220ENST00000613744 ZNF512BQ96KM6 892 aaPredicted RBP25.01■■□□□ 1.59
POLR2J3-220ENST00000613744 AKAP11Q9UKA4 1901 aa25■■□□□ 1.59
POLR2J3-220ENST00000613744 PTPDC1A2A3K4 754 aa25■■□□□ 1.59
POLR2J3-220ENST00000613744 FANCGO15287 622 aa25■■□□□ 1.59
POLR2J3-220ENST00000613744 TXLNAP40222 546 aa25■■□□□ 1.59
POLR2J3-220ENST00000613744 MAGEA9P43362 315 aa25■■□□□ 1.59
POLR2J3-220ENST00000613744 LMAN1P49257 510 aa25■■□□□ 1.59
POLR2J3-220ENST00000613744 NIM1KQ8IY84 436 aa25■■□□□ 1.59
POLR2J3-220ENST00000613744 MXD3Q9BW11 206 aa25■■□□□ 1.59
POLR2J3-220ENST00000613744 LCMT1Q9UIC8 334 aa25■■□□□ 1.59
POLR2J3-220ENST00000613744 DENND2AQ9ULE3 1009 aa25■■□□□ 1.59
POLR2J3-220ENST00000613744 NEDD4P46934 1319 aa25■■□□□ 1.59
POLR2J3-220ENST00000613744 A0A087WWV3 80 aa25■■□□□ 1.59
POLR2J3-220ENST00000613744 TRIM66O15016 1216 aa25■■□□□ 1.59
POLR2J3-220ENST00000613744 ZNF589Q86UQ0 364 aaPredicted RBP25■■□□□ 1.59
POLR2J3-220ENST00000613744 JDP2Q8WYK2 163 aa25■■□□□ 1.59
POLR2J3-220ENST00000613744 AGXT2Q9BYV1 514 aa25■■□□□ 1.59
POLR2J3-220ENST00000613744 FTOQ9C0B1 505 aaKnown RBP eCLIP25■■□□□ 1.59
POLR2J3-220ENST00000613744 MKRN1Q9UHC7 482 aaKnown RBP25■■□□□ 1.59
POLR2J3-220ENST00000613744 PPP2R2CQ9Y2T4 447 aa25■■□□□ 1.59
POLR2J3-220ENST00000613744 RAD17O75943 681 aa24.99■■□□□ 1.59
POLR2J3-220ENST00000613744 LONRF2Q1L5Z9 754 aa24.99■■□□□ 1.59
POLR2J3-220ENST00000613744 VSTM4Q8IW00 320 aa24.99■■□□□ 1.59
POLR2J3-220ENST00000613744 CHGBP05060 677 aa24.98■■□□□ 1.59
POLR2J3-220ENST00000613744 GTF2A1P52655 376 aaPredicted RBP24.98■■□□□ 1.59
POLR2J3-220ENST00000613744 PODNQ7Z5L7 613 aa24.98■■□□□ 1.59
POLR2J3-220ENST00000613744 CCDC34Q96HJ3 373 aa24.98■■□□□ 1.59
POLR2J3-220ENST00000613744 ABCF2Q9UG63 623 aa24.98■■□□□ 1.59
POLR2J3-220ENST00000613744 MYH13Q9UKX3 1938 aa24.98■■□□□ 1.59
POLR2J3-220ENST00000613744 SCN9AQ15858 1988 aa24.98■■□□□ 1.59
POLR2J3-220ENST00000613744 EIF3JO75822 258 aaKnown RBP24.98■■□□□ 1.59
POLR2J3-220ENST00000613744 LMNB1P20700 586 aa24.98■■□□□ 1.59
POLR2J3-220ENST00000613744 NDUFA8P51970 172 aa24.98■■□□□ 1.59
POLR2J3-220ENST00000613744 TUBB2AQ13885 445 aa24.98■■□□□ 1.59
POLR2J3-220ENST00000613744 TTLL5Q6EMB2 1281 aa24.98■■□□□ 1.59
POLR2J3-220ENST00000613744 TUBB2BQ9BVA1 445 aa24.98■■□□□ 1.59
POLR2J3-220ENST00000613744 POLR3EQ9NVU0 708 aa24.98■■□□□ 1.59
POLR2J3-220ENST00000613744 CTDNEP1O95476 244 aa24.97■■□□□ 1.59
POLR2J3-220ENST00000613744 UBASH3AP57075 661 aa24.97■■□□□ 1.59
POLR2J3-220ENST00000613744 LINC00301Q8NCQ3 95 aa24.97■■□□□ 1.59
POLR2J3-220ENST00000613744 RGS22Q8NE09 1264 aa24.97■■□□□ 1.59
POLR2J3-220ENST00000613744 VPS33BQ9H267 617 aa24.97■■□□□ 1.59
POLR2J3-220ENST00000613744 PIH1D3Q9NQM4 214 aaKnown RBP24.97■■□□□ 1.59
POLR2J3-220ENST00000613744 RNF181Q9P0P0 153 aa24.97■■□□□ 1.59
POLR2J3-220ENST00000613744 GRIN3BO60391 1043 aa24.97■■□□□ 1.59
POLR2J3-220ENST00000613744 USP5P45974 858 aa24.97■■□□□ 1.59
POLR2J3-220ENST00000613744 DHX32Q7L7V1 743 aaKnown RBP24.97■■□□□ 1.59
POLR2J3-220ENST00000613744 KBTBD3Q8NAB2 608 aa24.97■■□□□ 1.59
POLR2J3-220ENST00000613744 ZNRF3Q9ULT6 936 aa24.97■■□□□ 1.59
POLR2J3-220ENST00000613744 SEMA3EO15041 775 aa24.96■■□□□ 1.59
POLR2J3-220ENST00000613744 GNL2Q13823 731 aaKnown RBP24.96■■□□□ 1.59
POLR2J3-220ENST00000613744 HDXQ7Z353 690 aa24.96■■□□□ 1.59
POLR2J3-220ENST00000613744 TMEM139Q8IV31 216 aa24.96■■□□□ 1.59
POLR2J3-220ENST00000613744 A0A1B0GVL5 298 aa24.95■■□□□ 1.59
POLR2J3-220ENST00000613744 STX10O60499 249 aa24.95■■□□□ 1.59
POLR2J3-220ENST00000613744 TOP1P11387 765 aaKnown RBP24.95■■□□□ 1.59
POLR2J3-220ENST00000613744 APOBRQ0VD83 1088 aa24.95■■□□□ 1.59
POLR2J3-220ENST00000613744 GRIK5Q16478 980 aa24.95■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms