RNA–Protein interactions for RNA: ENST00000594661.5

PNKP-204, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 2

Gene PNKP, Length 2,111 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-204ENST00000594661 GOLGA8AA7E2F4 631 aa17.62■□□□□ 0.41
PNKP-204ENST00000594661 KIF2AO00139 706 aaPredicted RBP17.62■□□□□ 0.41
PNKP-204ENST00000594661 RIMBP2O15034 1052 aa17.62■□□□□ 0.41
PNKP-204ENST00000594661 ATP8B1O43520 1251 aa17.62■□□□□ 0.41
PNKP-204ENST00000594661 ALDH1B1P30837 517 aa17.62■□□□□ 0.41
PNKP-204ENST00000594661 GSTO1P78417 241 aa17.62■□□□□ 0.41
PNKP-204ENST00000594661 SART3Q15020 963 aaKnown RBP17.62■□□□□ 0.41
PNKP-204ENST00000594661 CAMK4Q16566 473 aa17.62■□□□□ 0.41
PNKP-204ENST00000594661 OTUD7BQ6GQQ9 843 aa17.62■□□□□ 0.41
PNKP-204ENST00000594661 FBXO18Q8NFZ0 1043 aa17.62■□□□□ 0.41
PNKP-204ENST00000594661 GOLGA5Q8TBA6 731 aa17.62■□□□□ 0.41
PNKP-204ENST00000594661 SH3RF3Q8TEJ3 882 aaPredicted RBP17.62■□□□□ 0.41
PNKP-204ENST00000594661 ESR2Q92731 530 aa17.62■□□□□ 0.41
PNKP-204ENST00000594661 SMARCE1Q969G3 411 aa17.62■□□□□ 0.41
PNKP-204ENST00000594661 L2HGDHQ9H9P8 463 aa17.62■□□□□ 0.41
PNKP-204ENST00000594661 FGRP09769 529 aa17.61■□□□□ 0.41
PNKP-204ENST00000594661 PRR29P0C7W0 189 aa17.61■□□□□ 0.41
PNKP-204ENST00000594661 MAP3K11Q16584 847 aa17.61■□□□□ 0.41
PNKP-204ENST00000594661 DRC7Q8IY82 874 aa17.61■□□□□ 0.41
PNKP-204ENST00000594661 MTA3Q9BTC8 594 aa17.61■□□□□ 0.41
PNKP-204ENST00000594661 RRP15Q9Y3B9 282 aaKnown RBP17.61■□□□□ 0.41
PNKP-204ENST00000594661 CEP83Q9Y592 693 aa17.61■□□□□ 0.41
PNKP-204ENST00000594661 MROH7-TTC4A0A0A0MT08 1334 aa17.61■□□□□ 0.41
PNKP-204ENST00000594661 CT47A1Q5JQC4 288 aaPredicted RBP17.6■□□□□ 0.41
PNKP-204ENST00000594661 MFSD14BQ5SR56 506 aa17.6■□□□□ 0.41
PNKP-204ENST00000594661 ZNF396Q96N95 335 aaPredicted RBP17.6■□□□□ 0.41
PNKP-204ENST00000594661 UBAC1Q9BSL1 405 aa17.6■□□□□ 0.41
PNKP-204ENST00000594661 RTFDC1Q9BY42 306 aaPredicted RBP17.6■□□□□ 0.41
PNKP-204ENST00000594661 GJB4Q9NTQ9 266 aa17.6■□□□□ 0.41
PNKP-204ENST00000594661 ARPP21Q9UBL0 812 aaPredicted RBP17.6■□□□□ 0.41
PNKP-204ENST00000594661 MKRN1Q9UHC7 482 aaKnown RBP17.6■□□□□ 0.41
PNKP-204ENST00000594661 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.6■□□□□ 0.41
PNKP-204ENST00000594661 MRVI1Q9Y6F6 885 aa17.6■□□□□ 0.41
PNKP-204ENST00000594661 ERICH2A1L162 156 aa17.6■□□□□ 0.41
PNKP-204ENST00000594661 CCDC172P0C7W6 258 aa17.6■□□□□ 0.41
PNKP-204ENST00000594661 SEC23AQ15436 765 aa17.6■□□□□ 0.41
PNKP-204ENST00000594661 NTRK3Q16288 839 aa17.6■□□□□ 0.41
PNKP-204ENST00000594661 SLC4A8Q2Y0W8 1093 aa17.6■□□□□ 0.41
PNKP-204ENST00000594661 PHKBQ93100 1093 aa17.6■□□□□ 0.41
PNKP-204ENST00000594661 C8orf76Q96K31 380 aa17.6■□□□□ 0.41
PNKP-204ENST00000594661 FTOQ9C0B1 505 aaKnown RBP eCLIP17.6■□□□□ 0.41
PNKP-204ENST00000594661 TNMDQ9H2S6 317 aa17.6■□□□□ 0.41
PNKP-204ENST00000594661 DDX19AQ9NUU7 478 aaKnown RBP17.6■□□□□ 0.41
PNKP-204ENST00000594661 STK32BQ9NY57 414 aa17.6■□□□□ 0.41
PNKP-204ENST00000594661 PSD3Q9NYI0 1048 aa17.6■□□□□ 0.41
PNKP-204ENST00000594661 TNKSO95271 1327 aa17.6■□□□□ 0.41
PNKP-204ENST00000594661 NID2Q14112 1375 aa17.6■□□□□ 0.41
PNKP-204ENST00000594661 ECM29Q5VYK3 1845 aa17.6■□□□□ 0.41
PNKP-204ENST00000594661 RANBP6O60518 1105 aaKnown RBP17.59■□□□□ 0.41
PNKP-204ENST00000594661 USP17L8P0C7I0 530 aa17.59■□□□□ 0.41
PNKP-204ENST00000594661 SBK1Q52WX2 424 aa17.59■□□□□ 0.41
PNKP-204ENST00000594661 C2CD5Q86YS7 1000 aa17.59■□□□□ 0.41
PNKP-204ENST00000594661 AIFM3Q96NN9 605 aa17.59■□□□□ 0.41
PNKP-204ENST00000594661 MCM9Q9NXL9 1143 aa17.59■□□□□ 0.41
PNKP-204ENST00000594661 USP27XA6NNY8 438 aa17.59■□□□□ 0.41
PNKP-204ENST00000594661 NR1I2O75469 434 aa17.59■□□□□ 0.41
PNKP-204ENST00000594661 PPP4CP60510 307 aa17.59■□□□□ 0.41
PNKP-204ENST00000594661 ATL3Q6DD88 541 aa17.59■□□□□ 0.41
PNKP-204ENST00000594661 DPP8Q6V1X1 898 aaPredicted RBP17.59■□□□□ 0.41
PNKP-204ENST00000594661 USP28Q96RU2 1077 aa17.59■□□□□ 0.41
PNKP-204ENST00000594661 RCOR1Q9UKL0 485 aa17.59■□□□□ 0.41
PNKP-204ENST00000594661 FAM205AQ6ZU69 1335 aa17.58■□□□□ 0.4
PNKP-204ENST00000594661 CDKL5O76039 1030 aa17.58■□□□□ 0.4
PNKP-204ENST00000594661 BAG3O95817 575 aa17.58■□□□□ 0.4
PNKP-204ENST00000594661 LDHCP07864 332 aa17.58■□□□□ 0.4
PNKP-204ENST00000594661 PCP11498 1178 aaKnown RBP17.58■□□□□ 0.4
PNKP-204ENST00000594661 ATP2B1P20020 1258 aa17.58■□□□□ 0.4
PNKP-204ENST00000594661 USP5P45974 858 aa17.58■□□□□ 0.4
PNKP-204ENST00000594661 GTF2IP78347 998 aa17.58■□□□□ 0.4
PNKP-204ENST00000594661 NOM1Q5C9Z4 860 aaKnown RBP17.58■□□□□ 0.4
PNKP-204ENST00000594661 SYNE3Q6ZMZ3 975 aa17.58■□□□□ 0.4
PNKP-204ENST00000594661 LUZP1Q86V48 1076 aa17.58■□□□□ 0.4
PNKP-204ENST00000594661 LRRC8AQ8IWT6 810 aa17.58■□□□□ 0.4
PNKP-204ENST00000594661 ENAHQ8N8S7 591 aaPredicted RBP17.58■□□□□ 0.4
PNKP-204ENST00000594661 BANK1Q8NDB2 785 aa17.58■□□□□ 0.4
PNKP-204ENST00000594661 ZSCAN10Q96SZ4 725 aaPredicted RBP17.58■□□□□ 0.4
PNKP-204ENST00000594661 COA1Q9GZY4 146 aa17.58■□□□□ 0.4
PNKP-204ENST00000594661 QSER1Q2KHR3 1735 aa17.58■□□□□ 0.4
PNKP-204ENST00000594661 BTDP43251 543 aa17.57■□□□□ 0.4
PNKP-204ENST00000594661 TYRO3Q06418 890 aa17.57■□□□□ 0.4
PNKP-204ENST00000594661 ERCC6LQ2NKX8 1250 aa17.57■□□□□ 0.4
PNKP-204ENST00000594661 CCDC144BQ3MJ40 725 aa17.57■□□□□ 0.4
PNKP-204ENST00000594661 TTC31Q49AM3 519 aaPredicted RBP17.57■□□□□ 0.4
PNKP-204ENST00000594661 CPLX2Q6PUV4 134 aaKnown RBP17.57■□□□□ 0.4
PNKP-204ENST00000594661 CKAP2LQ8IYA6 745 aa17.57■□□□□ 0.4
PNKP-204ENST00000594661 ZNF654Q8IZM8 581 aa17.57■□□□□ 0.4
PNKP-204ENST00000594661 TBC1D22AQ8WUA7 517 aa17.57■□□□□ 0.4
PNKP-204ENST00000594661 TRIM5Q9C035 493 aa17.57■□□□□ 0.4
PNKP-204ENST00000594661 CLSTN2Q9H4D0 955 aa17.57■□□□□ 0.4
PNKP-204ENST00000594661 NAV1Q8NEY1 1877 aa17.57■□□□□ 0.4
PNKP-204ENST00000594661 CDK5RAP2Q96SN8 1893 aa17.57■□□□□ 0.4
PNKP-204ENST00000594661 UBE2Q2LH0YL09 131 aa17.57■□□□□ 0.4
PNKP-204ENST00000594661 ORC4O43929 436 aa17.57■□□□□ 0.4
PNKP-204ENST00000594661 MAGEA9P43362 315 aa17.57■□□□□ 0.4
PNKP-204ENST00000594661 CCDC93Q567U6 631 aa17.57■□□□□ 0.4
PNKP-204ENST00000594661 TMTC2Q8N394 836 aa17.57■□□□□ 0.4
PNKP-204ENST00000594661 TGFBRAP1Q8WUH2 860 aa17.57■□□□□ 0.4
PNKP-204ENST00000594661 ZC3H12CQ9C0D7 883 aaKnown RBP17.57■□□□□ 0.4
PNKP-204ENST00000594661 PDGFDQ9GZP0 370 aaPredicted RBP17.57■□□□□ 0.4
PNKP-204ENST00000594661 CBX8Q9HC52 389 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms