RNA–Protein interactions for RNA: ENST00000593598.5

SNAPC2-202, Transcript of small nuclear RNA activating complex polypeptide 2, humanhuman

TSL 3

Gene SNAPC2, Length 190 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC2-202ENST00000593598 SH3D19Q5HYK7 790 aa16.28■□□□□ 0.2
SNAPC2-202ENST00000593598 MFSD6Q6ZSS7 791 aa16.28■□□□□ 0.2
SNAPC2-202ENST00000593598 STAG1Q8WVM7 1258 aa16.28■□□□□ 0.2
SNAPC2-202ENST00000593598 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.28■□□□□ 0.2
SNAPC2-202ENST00000593598 LSG1Q9H089 658 aaKnown RBP16.28■□□□□ 0.2
SNAPC2-202ENST00000593598 NBPF3Q9H094 633 aa16.28■□□□□ 0.2
SNAPC2-202ENST00000593598 RNF41Q9H4P4 317 aaPredicted RBP16.28■□□□□ 0.2
SNAPC2-202ENST00000593598 KANSL2Q9H9L4 492 aa16.28■□□□□ 0.2
SNAPC2-202ENST00000593598 ANO2Q9NQ90 1003 aa16.28■□□□□ 0.2
SNAPC2-202ENST00000593598 RNF186Q9NXI6 227 aa16.28■□□□□ 0.2
SNAPC2-202ENST00000593598 BTBD19C9JJ37 291 aa16.27■□□□□ 0.2
SNAPC2-202ENST00000593598 CA12O43570 354 aa16.27■□□□□ 0.2
SNAPC2-202ENST00000593598 TSPY3P0CV98 308 aa16.27■□□□□ 0.2
SNAPC2-202ENST00000593598 TSPY8P0CW00 308 aa16.27■□□□□ 0.2
SNAPC2-202ENST00000593598 TFAP4Q01664 338 aa16.27■□□□□ 0.2
SNAPC2-202ENST00000593598 MTMR2Q13614 643 aa16.27■□□□□ 0.2
SNAPC2-202ENST00000593598 FAM47AQ5JRC9 791 aa16.27■□□□□ 0.2
SNAPC2-202ENST00000593598 TBC1D10CQ8IV04 446 aa16.27■□□□□ 0.2
SNAPC2-202ENST00000593598 NEDD1Q8NHV4 660 aa16.27■□□□□ 0.2
SNAPC2-202ENST00000593598 TOMM22Q9NS69 142 aa16.27■□□□□ 0.2
SNAPC2-202ENST00000593598 SAGE1Q9NXZ1 904 aa16.27■□□□□ 0.2
SNAPC2-202ENST00000593598 TSPY2A6NKD2 308 aa16.26■□□□□ 0.19
SNAPC2-202ENST00000593598 RANBP6O60518 1105 aaKnown RBP16.26■□□□□ 0.19
SNAPC2-202ENST00000593598 TRPA1O75762 1119 aa16.26■□□□□ 0.19
SNAPC2-202ENST00000593598 HMGCS2P54868 508 aa16.26■□□□□ 0.19
SNAPC2-202ENST00000593598 ICA1Q05084 483 aa16.26■□□□□ 0.19
SNAPC2-202ENST00000593598 RRP12Q5JTH9 1297 aaKnown RBP16.26■□□□□ 0.19
SNAPC2-202ENST00000593598 USP17L2Q6R6M4 530 aa16.26■□□□□ 0.19
SNAPC2-202ENST00000593598 GADL1Q6ZQY3 521 aa16.26■□□□□ 0.19
SNAPC2-202ENST00000593598 ANKRD23Q86SG2 305 aa16.26■□□□□ 0.19
SNAPC2-202ENST00000593598 SIAH1Q8IUQ4 282 aa16.26■□□□□ 0.19
SNAPC2-202ENST00000593598 FAM43AQ8N2R8 423 aa16.26■□□□□ 0.19
SNAPC2-202ENST00000593598 PROCA1Q8NCQ7 364 aaPredicted RBP16.26■□□□□ 0.19
SNAPC2-202ENST00000593598 ACER1Q8TDN7 264 aa16.26■□□□□ 0.19
SNAPC2-202ENST00000593598 FEZ1Q99689 392 aa16.26■□□□□ 0.19
SNAPC2-202ENST00000593598 ARHGEF10LQ9HCE6 1279 aa16.26■□□□□ 0.19
SNAPC2-202ENST00000593598 ZCCHC17Q9NP64 241 aaKnown RBP16.26■□□□□ 0.19
SNAPC2-202ENST00000593598 TMOD4Q9NZQ9 345 aa16.26■□□□□ 0.19
SNAPC2-202ENST00000593598 RBM8AQ9Y5S9 174 aaKnown RBP16.26■□□□□ 0.19
SNAPC2-202ENST00000593598 PTPRFP10586 1907 aa16.25■□□□□ 0.19
SNAPC2-202ENST00000593598 IGKV6D-41A0A0C4DH26 115 aa16.25■□□□□ 0.19
SNAPC2-202ENST00000593598 A0A1W2PRG0 241 aa16.25■□□□□ 0.19
SNAPC2-202ENST00000593598 CYP21A2P08686 494 aa16.25■□□□□ 0.19
SNAPC2-202ENST00000593598 EEF2P13639 858 aaKnown RBP16.25■□□□□ 0.19
SNAPC2-202ENST00000593598 NT5C2P49902 561 aa16.25■□□□□ 0.19
SNAPC2-202ENST00000593598 USP14P54578 494 aa16.25■□□□□ 0.19
SNAPC2-202ENST00000593598 GPAT2Q6NUI2 795 aa16.25■□□□□ 0.19
SNAPC2-202ENST00000593598 KIAA1683Q9H0B3 1180 aa16.25■□□□□ 0.19
SNAPC2-202ENST00000593598 PLIN4Q96Q06 1357 aa16.25■□□□□ 0.19
SNAPC2-202ENST00000593598 LAMA4Q16363 1823 aa16.24■□□□□ 0.19
SNAPC2-202ENST00000593598 GREB1LQ9C091 1923 aaPredicted RBP16.24■□□□□ 0.19
SNAPC2-202ENST00000593598 PDHXO00330 501 aa16.24■□□□□ 0.19
SNAPC2-202ENST00000593598 DGKZQ13574 1117 aa16.24■□□□□ 0.19
SNAPC2-202ENST00000593598 CLEC10AQ8IUN9 316 aa16.24■□□□□ 0.19
SNAPC2-202ENST00000593598 ESR2Q92731 530 aa16.24■□□□□ 0.19
SNAPC2-202ENST00000593598 C12orf42Q96LP6 360 aa16.24■□□□□ 0.19
SNAPC2-202ENST00000593598 CFHR5Q9BXR6 569 aa16.24■□□□□ 0.19
SNAPC2-202ENST00000593598 SH2D4AQ9H788 454 aa16.24■□□□□ 0.19
SNAPC2-202ENST00000593598 EMILIN3Q9NT22 766 aa16.24■□□□□ 0.19
SNAPC2-202ENST00000593598 MTMR4Q9NYA4 1195 aa16.24■□□□□ 0.19
SNAPC2-202ENST00000593598 NYAP2Q9P242 653 aa16.24■□□□□ 0.19
SNAPC2-202ENST00000593598 AGTPBP1Q9UPW5 1226 aa16.24■□□□□ 0.19
SNAPC2-202ENST00000593598 SLC45A1Q9Y2W3 748 aa16.24■□□□□ 0.19
SNAPC2-202ENST00000593598 TMX2Q9Y320 296 aa16.24■□□□□ 0.19
SNAPC2-202ENST00000593598 NEDD4P46934 1319 aa16.23■□□□□ 0.19
SNAPC2-202ENST00000593598 FOXN1O15353 648 aa16.23■□□□□ 0.19
SNAPC2-202ENST00000593598 ATP2B2Q01814 1243 aa16.23■□□□□ 0.19
SNAPC2-202ENST00000593598 NECTIN1Q15223 517 aa16.23■□□□□ 0.19
SNAPC2-202ENST00000593598 TAF1CQ15572 869 aaPredicted RBP16.23■□□□□ 0.19
SNAPC2-202ENST00000593598 ZYXQ15942 572 aaKnown RBP16.23■□□□□ 0.19
SNAPC2-202ENST00000593598 PPP4R3BQ5MIZ7 849 aa16.23■□□□□ 0.19
SNAPC2-202ENST00000593598 CEP95Q96GE4 821 aa16.23■□□□□ 0.19
SNAPC2-202ENST00000593598 KRT23Q9C075 422 aa16.23■□□□□ 0.19
SNAPC2-202ENST00000593598 CNNM2Q9H8M5 875 aa16.23■□□□□ 0.19
SNAPC2-202ENST00000593598 TCP11L1Q9NUJ3 509 aa16.23■□□□□ 0.19
SNAPC2-202ENST00000593598 REC8O95072 547 aa16.22■□□□□ 0.19
SNAPC2-202ENST00000593598 TBC1D8O95759 1140 aa16.22■□□□□ 0.19
SNAPC2-202ENST00000593598 TTLL1O95922 423 aa16.22■□□□□ 0.19
SNAPC2-202ENST00000593598 PABPC4Q13310 644 aaKnown RBP eCLIP16.22■□□□□ 0.19
SNAPC2-202ENST00000593598 TREML2Q5T2D2 321 aa16.22■□□□□ 0.19
SNAPC2-202ENST00000593598 MKL1Q969V6 931 aa16.22■□□□□ 0.19
SNAPC2-202ENST00000593598 ZFYVE28Q9HCC9 887 aa16.22■□□□□ 0.19
SNAPC2-202ENST00000593598 IL17RBQ9NRM6 502 aa16.22■□□□□ 0.19
SNAPC2-202ENST00000593598 CLIP2Q9UDT6 1046 aa16.22■□□□□ 0.19
SNAPC2-202ENST00000593598 B4E1Z4 1266 aa16.21■□□□□ 0.19
SNAPC2-202ENST00000593598 SLC27A2O14975 620 aa16.21■□□□□ 0.19
SNAPC2-202ENST00000593598 CAPN15O75808 1086 aa16.21■□□□□ 0.19
SNAPC2-202ENST00000593598 OSBPP22059 807 aa16.21■□□□□ 0.19
SNAPC2-202ENST00000593598 HOXA7P31268 230 aaPredicted RBP16.21■□□□□ 0.19
SNAPC2-202ENST00000593598 CTCFP49711 727 aaPredicted RBP16.21■□□□□ 0.19
SNAPC2-202ENST00000593598 TRDNQ13061 729 aa16.21■□□□□ 0.19
SNAPC2-202ENST00000593598 CRHR2Q13324 411 aa16.21■□□□□ 0.19
SNAPC2-202ENST00000593598 CREB3L3Q68CJ9 461 aa16.21■□□□□ 0.19
SNAPC2-202ENST00000593598 NKX2-3Q8TAU0 364 aa16.21■□□□□ 0.19
SNAPC2-202ENST00000593598 VCPKMTQ9H867 229 aa16.21■□□□□ 0.19
SNAPC2-202ENST00000593598 ZSWIM5Q9P217 1185 aa16.21■□□□□ 0.19
SNAPC2-202ENST00000593598 TSKSQ9UJT2 592 aa16.21■□□□□ 0.19
SNAPC2-202ENST00000593598 SYNPO2Q9UMS6 1093 aa16.21■□□□□ 0.19
SNAPC2-202ENST00000593598 LOC285556D6RIA3 1793 aa16.21■□□□□ 0.18
SNAPC2-202ENST00000593598 E7EWF7 191 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms