RNA–Protein interactions for RNA: ENST00000581298.5

SNX11-208, Transcript of sorting nexin 11, humanhuman

TSL 5

Gene SNX11, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-208ENST00000581298 GSG1L2A8MUP6 293 aa8.64□□□□□ -1.03
SNX11-208ENST00000581298 ERC2O15083 957 aa8.64□□□□□ -1.03
SNX11-208ENST00000581298 RNF113AO15541 343 aaKnown RBP8.64□□□□□ -1.03
SNX11-208ENST00000581298 PRKAB2O43741 272 aa8.64□□□□□ -1.03
SNX11-208ENST00000581298 MBD4O95243 580 aa8.64□□□□□ -1.03
SNX11-208ENST00000581298 GDF11O95390 407 aa8.64□□□□□ -1.03
SNX11-208ENST00000581298 GH2P01242 217 aa8.64□□□□□ -1.03
SNX11-208ENST00000581298 CHGBP05060 677 aa8.64□□□□□ -1.03
SNX11-208ENST00000581298 USP14P54578 494 aa8.64□□□□□ -1.03
SNX11-208ENST00000581298 FCGRTP55899 365 aa8.64□□□□□ -1.03
SNX11-208ENST00000581298 ABCB5Q2M3G0 1257 aa8.64□□□□□ -1.03
SNX11-208ENST00000581298 SHROOM1Q2M3G4 852 aaPredicted RBP8.64□□□□□ -1.03
SNX11-208ENST00000581298 SLFNL1Q499Z3 407 aa8.64□□□□□ -1.03
SNX11-208ENST00000581298 LHX8Q68G74 356 aa8.64□□□□□ -1.03
SNX11-208ENST00000581298 USP17L2Q6R6M4 530 aa8.64□□□□□ -1.03
SNX11-208ENST00000581298 POTEEQ6S8J3 1075 aa8.64□□□□□ -1.03
SNX11-208ENST00000581298 C16orf86Q6ZW13 317 aa8.64□□□□□ -1.03
SNX11-208ENST00000581298 NBPF11Q86T75 865 aa8.64□□□□□ -1.03
SNX11-208ENST00000581298 SIAH1Q8IUQ4 282 aa8.64□□□□□ -1.03
SNX11-208ENST00000581298 PXYLP1Q8TE99 480 aa8.64□□□□□ -1.03
SNX11-208ENST00000581298 SDR42E1Q8WUS8 393 aa8.64□□□□□ -1.03
SNX11-208ENST00000581298 GPATCH3Q96I76 525 aa8.64□□□□□ -1.03
SNX11-208ENST00000581298 ASCC2Q9H1I8 757 aaPredicted RBP8.64□□□□□ -1.03
SNX11-208ENST00000581298 ARMT1Q9H993 441 aa8.64□□□□□ -1.03
SNX11-208ENST00000581298 GJD2Q9UKL4 321 aa8.64□□□□□ -1.03
SNX11-208ENST00000581298 DOCK3Q8IZD9 2030 aa8.63□□□□□ -1.03
SNX11-208ENST00000581298 POLR3DP05423 398 aaPredicted RBP8.63□□□□□ -1.03
SNX11-208ENST00000581298 GNAT2P19087 354 aa8.63□□□□□ -1.03
SNX11-208ENST00000581298 MTMR2Q13614 643 aa8.63□□□□□ -1.03
SNX11-208ENST00000581298 LRRFIP1Q32MZ4 808 aaKnown RBP8.63□□□□□ -1.03
SNX11-208ENST00000581298 CTR9Q6PD62 1173 aa8.63□□□□□ -1.03
SNX11-208ENST00000581298 CATSPERGQ6ZRH7 1159 aa8.63□□□□□ -1.03
SNX11-208ENST00000581298 TMEM179Q6ZVK1 233 aa8.63□□□□□ -1.03
SNX11-208ENST00000581298 P2RX7Q99572 595 aaKnown RBP8.63□□□□□ -1.03
SNX11-208ENST00000581298 COL25A1Q9BXS0 654 aaPredicted RBP8.63□□□□□ -1.03
SNX11-208ENST00000581298 TRIM34Q9BYJ4 488 aa8.63□□□□□ -1.03
SNX11-208ENST00000581298 OSBPL3Q9H4L5 887 aa8.63□□□□□ -1.03
SNX11-208ENST00000581298 CABP5Q9NP86 173 aa8.63□□□□□ -1.03
SNX11-208ENST00000581298 TMOD4Q9NZQ9 345 aa8.63□□□□□ -1.03
SNX11-208ENST00000581298 RBPJLQ9UBG7 517 aa8.63□□□□□ -1.03
SNX11-208ENST00000581298 MUC3AQ02505 3323 aa8.63□□□□□ -1.03
SNX11-208ENST00000581298 ROBO3Q96MS0 1386 aa8.62□□□□□ -1.03
SNX11-208ENST00000581298 A0A1W2PRG0 241 aa8.62□□□□□ -1.03
SNX11-208ENST00000581298 USP17L15C9J2P7 530 aa8.62□□□□□ -1.03
SNX11-208ENST00000581298 USP17L13C9JLJ4 530 aa8.62□□□□□ -1.03
SNX11-208ENST00000581298 USP17L12C9JPN9 530 aa8.62□□□□□ -1.03
SNX11-208ENST00000581298 USP17L11C9JVI0 530 aa8.62□□□□□ -1.03
SNX11-208ENST00000581298 USP17L21D6R901 530 aa8.62□□□□□ -1.03
SNX11-208ENST00000581298 USP17L18D6R9N7 530 aa8.62□□□□□ -1.03
SNX11-208ENST00000581298 USP17L22D6RA61 530 aa8.62□□□□□ -1.03
SNX11-208ENST00000581298 USP17L17D6RBQ6 530 aa8.62□□□□□ -1.03
SNX11-208ENST00000581298 USP17L19D6RCP7 530 aa8.62□□□□□ -1.03
SNX11-208ENST00000581298 USP17L20D6RJB6 530 aa8.62□□□□□ -1.03
SNX11-208ENST00000581298 GABBR2O75899 941 aa8.62□□□□□ -1.03
SNX11-208ENST00000581298 CYP2D6P10635 497 aa8.62□□□□□ -1.03
SNX11-208ENST00000581298 MX1P20591 662 aa8.62□□□□□ -1.03
SNX11-208ENST00000581298 GRK4P32298 578 aa8.62□□□□□ -1.03
SNX11-208ENST00000581298 CDK8P49336 464 aa8.62□□□□□ -1.03
SNX11-208ENST00000581298 HERVK_113P62684 666 aa8.62□□□□□ -1.03
SNX11-208ENST00000581298 USP17L24Q0WX57 530 aa8.62□□□□□ -1.03
SNX11-208ENST00000581298 ZMYM1Q5SVZ6 1142 aa8.62□□□□□ -1.03
SNX11-208ENST00000581298 SLAIN1Q8ND83 568 aa8.62□□□□□ -1.03
SNX11-208ENST00000581298 ACER1Q8TDN7 264 aa8.62□□□□□ -1.03
SNX11-208ENST00000581298 OTUD7AQ8TE49 926 aaPredicted RBP8.62□□□□□ -1.03
SNX11-208ENST00000581298 USP6NLQ92738 828 aa8.62□□□□□ -1.03
SNX11-208ENST00000581298 TXNRD2Q9NNW7 524 aa8.62□□□□□ -1.03
SNX11-208ENST00000581298 ARPP21Q9UBL0 812 aaPredicted RBP8.62□□□□□ -1.03
SNX11-208ENST00000581298 TMX2Q9Y320 296 aa8.62□□□□□ -1.03
SNX11-208ENST00000581298 ATAD5Q96QE3 1844 aa8.61□□□□□ -1.03
SNX11-208ENST00000581298 MYPNQ86TC9 1320 aa8.61□□□□□ -1.03
SNX11-208ENST00000581298 POTEFA5A3E0 1075 aa8.61□□□□□ -1.03
SNX11-208ENST00000581298 PATL2C9JE40 543 aaKnown RBP8.61□□□□□ -1.03
SNX11-208ENST00000581298 GPAA1O43292 621 aa8.61□□□□□ -1.03
SNX11-208ENST00000581298 FMNL1O95466 1100 aaPredicted RBP8.61□□□□□ -1.03
SNX11-208ENST00000581298 IGHA2P01877 340 aa8.61□□□□□ -1.03
SNX11-208ENST00000581298 XRCC5P13010 732 aaKnown RBP8.61□□□□□ -1.03
SNX11-208ENST00000581298 FLT3LGP49771 235 aa8.61□□□□□ -1.03
SNX11-208ENST00000581298 PDE1AP54750 535 aa8.61□□□□□ -1.03
SNX11-208ENST00000581298 PRKCZQ05513 592 aa8.61□□□□□ -1.03
SNX11-208ENST00000581298 SEPT2Q15019 361 aa8.61□□□□□ -1.03
SNX11-208ENST00000581298 Q3C1V9 767 aa8.61□□□□□ -1.03
SNX11-208ENST00000581298 SLC9C1Q4G0N8 1177 aa8.61□□□□□ -1.03
SNX11-208ENST00000581298 ANKRD45Q5TZF3 282 aa8.61□□□□□ -1.03
SNX11-208ENST00000581298 UBE2Q1Q7Z7E8 422 aa8.61□□□□□ -1.03
SNX11-208ENST00000581298 ANKRD13CQ8N6S4 541 aa8.61□□□□□ -1.03
SNX11-208ENST00000581298 SMCR8Q8TEV9 937 aaPredicted RBP8.61□□□□□ -1.03
SNX11-208ENST00000581298 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.61□□□□□ -1.03
SNX11-208ENST00000581298 RWDD1Q9H446 243 aaPredicted RBP8.61□□□□□ -1.03
SNX11-208ENST00000581298 PRDM6Q9NQX0 595 aa8.61□□□□□ -1.03
SNX11-208ENST00000581298 SYNPO2Q9UMS6 1093 aa8.61□□□□□ -1.03
SNX11-208ENST00000581298 GABRQQ9UN88 632 aa8.61□□□□□ -1.03
SNX11-208ENST00000581298 RABGAP1Q9Y3P9 1069 aa8.61□□□□□ -1.03
SNX11-208ENST00000581298 SLC4A4Q9Y6R1 1079 aa8.61□□□□□ -1.03
SNX11-208ENST00000581298 MYH7P12883 1935 aa8.6□□□□□ -1.03
SNX11-208ENST00000581298 IGKV6D-41A0A0C4DH26 115 aa8.6□□□□□ -1.03
SNX11-208ENST00000581298 SMIM22K7EJ46 135 aa8.6□□□□□ -1.03
SNX11-208ENST00000581298 FOXP2O15409 715 aa8.6□□□□□ -1.03
SNX11-208ENST00000581298 CNMDO75829 334 aa8.6□□□□□ -1.03
SNX11-208ENST00000581298 GJB1P08034 283 aa8.6□□□□□ -1.03
SNX11-208ENST00000581298 FGRP09769 529 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 135.8 ms