RNA–Protein interactions for RNA: ENST00000579308.1

CSNK1D-210, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 598 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-210ENST00000579308 USP17L18D6R9N7 530 aa12.97□□□□□ -0.33
CSNK1D-210ENST00000579308 USP17L22D6RA61 530 aa12.97□□□□□ -0.33
CSNK1D-210ENST00000579308 USP17L17D6RBQ6 530 aa12.97□□□□□ -0.33
CSNK1D-210ENST00000579308 USP17L19D6RCP7 530 aa12.97□□□□□ -0.33
CSNK1D-210ENST00000579308 USP17L20D6RJB6 530 aa12.97□□□□□ -0.33
CSNK1D-210ENST00000579308 COL6A1P12109 1028 aa12.97□□□□□ -0.33
CSNK1D-210ENST00000579308 GUCY1A2P33402 732 aa12.97□□□□□ -0.33
CSNK1D-210ENST00000579308 SHMT1P34896 483 aa12.97□□□□□ -0.33
CSNK1D-210ENST00000579308 RGS2P41220 211 aa12.97□□□□□ -0.33
CSNK1D-210ENST00000579308 GABPAQ06546 454 aa12.97□□□□□ -0.33
CSNK1D-210ENST00000579308 USP17L24Q0WX57 530 aa12.97□□□□□ -0.33
CSNK1D-210ENST00000579308 PDE3AQ14432 1141 aa12.97□□□□□ -0.33
CSNK1D-210ENST00000579308 CCL14Q16627 93 aa12.97□□□□□ -0.33
CSNK1D-210ENST00000579308 CERKLQ49MI3 558 aaPredicted RBP12.97□□□□□ -0.33
CSNK1D-210ENST00000579308 LBX2Q6XYB7 198 aa12.97□□□□□ -0.33
CSNK1D-210ENST00000579308 TTC6Q86TZ1 520 aa12.97□□□□□ -0.33
CSNK1D-210ENST00000579308 AACSQ86V21 672 aa12.97□□□□□ -0.33
CSNK1D-210ENST00000579308 ERC1Q8IUD2 1116 aa12.97□□□□□ -0.33
CSNK1D-210ENST00000579308 EXOC6BQ9Y2D4 811 aa12.97□□□□□ -0.33
CSNK1D-210ENST00000579308 A0A0C4DFX4 3053 aa12.97□□□□□ -0.33
CSNK1D-210ENST00000579308 PFASO15067 1338 aa12.96□□□□□ -0.33
CSNK1D-210ENST00000579308 IGHA2P01877 340 aa12.96□□□□□ -0.33
CSNK1D-210ENST00000579308 ZKSCAN1P17029 563 aaPredicted RBP12.96□□□□□ -0.33
CSNK1D-210ENST00000579308 VCAM1P19320 739 aa12.96□□□□□ -0.33
CSNK1D-210ENST00000579308 CCND3P30281 292 aaPredicted RBP12.96□□□□□ -0.33
CSNK1D-210ENST00000579308 USP14P54578 494 aa12.96□□□□□ -0.33
CSNK1D-210ENST00000579308 HNRNPUQ00839 825 aaKnown RBP eCLIP12.96□□□□□ -0.333e-18■□□□□ 9.1
CSNK1D-210ENST00000579308 MAP2K5Q13163 448 aa12.96□□□□□ -0.33
CSNK1D-210ENST00000579308 RAB3GAP1Q15042 981 aa12.96□□□□□ -0.33
CSNK1D-210ENST00000579308 ABCB5Q2M3G0 1257 aa12.96□□□□□ -0.33
CSNK1D-210ENST00000579308 C7orf61Q8IZ16 206 aa12.96□□□□□ -0.33
CSNK1D-210ENST00000579308 PANK1Q8TE04 598 aa12.96□□□□□ -0.33
CSNK1D-210ENST00000579308 PAGR1Q9BTK6 254 aa12.96□□□□□ -0.33
CSNK1D-210ENST00000579308 COL6A3P12111 3177 aa12.96□□□□□ -0.33
CSNK1D-210ENST00000579308 ZYXQ15942 572 aaKnown RBP12.95□□□□□ -0.34
CSNK1D-210ENST00000579308 RHPN1Q8TCX5 695 aa12.95□□□□□ -0.34
CSNK1D-210ENST00000579308 EDC3Q96F86 508 aaKnown RBP12.95□□□□□ -0.34
CSNK1D-210ENST00000579308 LRCH3Q96II8 777 aa12.95□□□□□ -0.34
CSNK1D-210ENST00000579308 APBA2Q99767 749 aa12.95□□□□□ -0.34
CSNK1D-210ENST00000579308 FLRT1Q9NZU1 646 aa12.95□□□□□ -0.34
CSNK1D-210ENST00000579308 BTBD7Q9P203 1132 aa12.95□□□□□ -0.34
CSNK1D-210ENST00000579308 ZMYND8Q9ULU4 1186 aaPredicted RBP12.95□□□□□ -0.34
CSNK1D-210ENST00000579308 PLXNB2O15031 1838 aa12.95□□□□□ -0.34
CSNK1D-210ENST00000579308 MAGEB6P1A0A0J9YX57 407 aa12.94□□□□□ -0.34
CSNK1D-210ENST00000579308 TCRBV5S4A2TA0A5A2 114 aa12.94□□□□□ -0.34
CSNK1D-210ENST00000579308 SLC15A5A6NIM6 579 aa12.94□□□□□ -0.34
CSNK1D-210ENST00000579308 HOXC6P09630 235 aa12.94□□□□□ -0.34
CSNK1D-210ENST00000579308 PDE6AP16499 860 aa12.94□□□□□ -0.34
CSNK1D-210ENST00000579308 PTPREP23469 700 aa12.94□□□□□ -0.34
CSNK1D-210ENST00000579308 CCNA1P78396 465 aa12.94□□□□□ -0.34
CSNK1D-210ENST00000579308 EVX2Q03828 476 aa12.94□□□□□ -0.34
CSNK1D-210ENST00000579308 TTF1Q15361 905 aaPredicted RBP12.94□□□□□ -0.34
CSNK1D-210ENST00000579308 HSP90AB4PQ58FF6 505 aa12.94□□□□□ -0.34
CSNK1D-210ENST00000579308 SLC9C2Q5TAH2 1124 aa12.94□□□□□ -0.34
CSNK1D-210ENST00000579308 GPR153Q6NV75 609 aa12.94□□□□□ -0.34
CSNK1D-210ENST00000579308 CCAR1Q8IX12 1150 aaKnown RBP12.94□□□□□ -0.34
CSNK1D-210ENST00000579308 MIER1Q8N108 512 aa12.94□□□□□ -0.34
CSNK1D-210ENST00000579308 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.94□□□□□ -0.34
CSNK1D-210ENST00000579308 FEZ1Q99689 392 aa12.94□□□□□ -0.34
CSNK1D-210ENST00000579308 IL1RAPL2Q9NP60 686 aa12.94□□□□□ -0.34
CSNK1D-210ENST00000579308 CABP5Q9NP86 173 aa12.94□□□□□ -0.34
CSNK1D-210ENST00000579308 U3KPZ7 1027 aaPredicted RBP12.94□□□□□ -0.34
CSNK1D-210ENST00000579308 ATAD5Q96QE3 1844 aa12.93□□□□□ -0.34
CSNK1D-210ENST00000579308 A0A1W2PRG0 241 aa12.93□□□□□ -0.34
CSNK1D-210ENST00000579308 SPDYE16A6NNV3 312 aaPredicted RBP12.93□□□□□ -0.34
CSNK1D-210ENST00000579308 GLRX3O76003 335 aaKnown RBP12.93□□□□□ -0.34
CSNK1D-210ENST00000579308 SYN1P17600 705 aa12.93□□□□□ -0.34
CSNK1D-210ENST00000579308 MAGEA10P43363 369 aaPredicted RBP12.93□□□□□ -0.34
CSNK1D-210ENST00000579308 GRB14Q14449 540 aa12.93□□□□□ -0.34
CSNK1D-210ENST00000579308 SEPT2Q15019 361 aa12.93□□□□□ -0.34
CSNK1D-210ENST00000579308 LRIT3Q3SXY7 679 aa12.93□□□□□ -0.34
CSNK1D-210ENST00000579308 SIRT2Q8IXJ6 389 aa12.93□□□□□ -0.34
CSNK1D-210ENST00000579308 RPAP3Q9H6T3 665 aaPredicted RBP12.93□□□□□ -0.34
CSNK1D-210ENST00000579308 MAST2Q6P0Q8 1798 aa12.93□□□□□ -0.34
CSNK1D-210ENST00000579308 ZNF532Q9HCE3 1301 aa12.92□□□□□ -0.34
CSNK1D-210ENST00000579308 POLR3DP05423 398 aaPredicted RBP12.92□□□□□ -0.34
CSNK1D-210ENST00000579308 DSG3P32926 999 aa12.92□□□□□ -0.34
CSNK1D-210ENST00000579308 LRRC26Q2I0M4 334 aa12.92□□□□□ -0.34
CSNK1D-210ENST00000579308 SIAH1Q8IUQ4 282 aa12.92□□□□□ -0.34
CSNK1D-210ENST00000579308 CRNKL1Q9BZJ0 848 aaKnown RBP12.92□□□□□ -0.34
CSNK1D-210ENST00000579308 DCP1AQ9NPI6 582 aaPredicted RBP12.92□□□□□ -0.34
CSNK1D-210ENST00000579308 MCM9Q9NXL9 1143 aa12.92□□□□□ -0.34
CSNK1D-210ENST00000579308 DNAH12Q6ZR08 3092 aa12.91□□□□□ -0.34
CSNK1D-210ENST00000579308 FOCADQ5VW36 1801 aa12.91□□□□□ -0.34
CSNK1D-210ENST00000579308 GOLIM4O00461 696 aa12.91□□□□□ -0.34
CSNK1D-210ENST00000579308 CYP2D6P10635 497 aa12.91□□□□□ -0.34
CSNK1D-210ENST00000579308 COG2Q14746 738 aa12.91□□□□□ -0.34
CSNK1D-210ENST00000579308 KIAA1755Q5JYT7 1200 aa12.91□□□□□ -0.34
CSNK1D-210ENST00000579308 MFSD14CQ5VZR4 134 aa12.91□□□□□ -0.34
CSNK1D-210ENST00000579308 RPAP2Q8IXW5 612 aaPredicted RBP12.91□□□□□ -0.34
CSNK1D-210ENST00000579308 CLASRPQ8N2M8 674 aaKnown RBP12.91□□□□□ -0.34
CSNK1D-210ENST00000579308 LCORLQ8N3X6 602 aa12.91□□□□□ -0.34
CSNK1D-210ENST00000579308 TRPV1Q8NER1 839 aa12.91□□□□□ -0.34
CSNK1D-210ENST00000579308 NPLOC4Q8TAT6 608 aa12.91□□□□□ -0.34
CSNK1D-210ENST00000579308 KIF1BPQ96EK5 621 aa12.91□□□□□ -0.34
CSNK1D-210ENST00000579308 ZBTB40Q9NUA8 1239 aa12.91□□□□□ -0.34
CSNK1D-210ENST00000579308 HOXC10Q9NYD6 342 aa12.91□□□□□ -0.34
CSNK1D-210ENST00000579308 CDK5RAP2Q96SN8 1893 aa12.91□□□□□ -0.34
CSNK1D-210ENST00000579308 ATP2B2Q01814 1243 aa12.9□□□□□ -0.34
CSNK1D-210ENST00000579308 TDHQ8IZJ6 230 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms