RNA–Protein interactions for RNA: ENST00000571961.7

JRK-203, Transcript of Jrk helix-turn-helix protein, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene JRK, Length 2,687 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
JRK-203ENST00000571961 CCDC66A2RUB6 948 aa18.29■□□□□ 0.52
JRK-203ENST00000571961 CCDC175P0C221 793 aa18.29■□□□□ 0.52
JRK-203ENST00000571961 CYP7A1P22680 504 aa18.29■□□□□ 0.52
JRK-203ENST00000571961 SPATA1Q5VX52 437 aa18.29■□□□□ 0.52
JRK-203ENST00000571961 RSRC2Q7L4I2 434 aaKnown RBP18.29■□□□□ 0.52
JRK-203ENST00000571961 APTXQ7Z2E3 356 aaKnown RBP18.29■□□□□ 0.52
JRK-203ENST00000571961 PPFIBP1Q86W92 1011 aa18.29■□□□□ 0.52
JRK-203ENST00000571961 PAGE5Q96GU1 130 aa18.29■□□□□ 0.52
JRK-203ENST00000571961 ZSWIM4Q9H7M6 989 aa18.29■□□□□ 0.52
JRK-203ENST00000571961 AATFQ9NY61 560 aaKnown RBP eCLIP18.29■□□□□ 0.52
JRK-203ENST00000571961 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.29■□□□□ 0.52
JRK-203ENST00000571961 SYNRGQ9UMZ2 1314 aa18.29■□□□□ 0.52
JRK-203ENST00000571961 ERVV-1B6SEH8 477 aa18.28■□□□□ 0.52
JRK-203ENST00000571961 TBC1D8O95759 1140 aa18.28■□□□□ 0.52
JRK-203ENST00000571961 RAD9BQ6WBX8 426 aa18.28■□□□□ 0.52
JRK-203ENST00000571961 ADGRA1Q86SQ6 560 aa18.28■□□□□ 0.52
JRK-203ENST00000571961 SYMPKQ92797 1274 aaKnown RBP18.28■□□□□ 0.52
JRK-203ENST00000571961 RNF26Q9BY78 433 aaPredicted RBP18.28■□□□□ 0.52
JRK-203ENST00000571961 PARD6BQ9BYG5 372 aa18.28■□□□□ 0.52
JRK-203ENST00000571961 NUP98P52948 1817 aa18.28■□□□□ 0.52
JRK-203ENST00000571961 WNT7AO00755 349 aa18.28■□□□□ 0.52
JRK-203ENST00000571961 COBLO75128 1261 aa18.28■□□□□ 0.52
JRK-203ENST00000571961 STAMQ92783 540 aa18.28■□□□□ 0.52
JRK-203ENST00000571961 PANX2Q96RD6 677 aa18.28■□□□□ 0.52
JRK-203ENST00000571961 ANKRD36CQ5JPF3 1778 aa18.28■□□□□ 0.52
JRK-203ENST00000571961 KRT2P35908 639 aa18.27■□□□□ 0.52
JRK-203ENST00000571961 SEC23AQ15436 765 aa18.27■□□□□ 0.52
JRK-203ENST00000571961 PKN1Q16512 942 aa18.27■□□□□ 0.52
JRK-203ENST00000571961 CCDC34Q96HJ3 373 aa18.27■□□□□ 0.52
JRK-203ENST00000571961 ABCF2Q9UG63 623 aa18.27■□□□□ 0.52
JRK-203ENST00000571961 V9GY48 417 aaPredicted RBP18.27■□□□□ 0.52
JRK-203ENST00000571961 XBP1P17861 261 aa18.27■□□□□ 0.52
JRK-203ENST00000571961 CYP2C19P33261 490 aa18.27■□□□□ 0.52
JRK-203ENST00000571961 CUL4BQ13620 913 aa18.27■□□□□ 0.52
JRK-203ENST00000571961 NOM1Q5C9Z4 860 aaKnown RBP18.27■□□□□ 0.52
JRK-203ENST00000571961 ESR2Q92731 530 aa18.27■□□□□ 0.52
JRK-203ENST00000571961 DOCK2Q92608 1830 aa18.27■□□□□ 0.51
JRK-203ENST00000571961 PLEKHA8P1O95397 391 aa18.26■□□□□ 0.51
JRK-203ENST00000571961 IL6STP40189 918 aaPredicted RBP18.26■□□□□ 0.51
JRK-203ENST00000571961 FAM193AP78312 1265 aa18.26■□□□□ 0.51
JRK-203ENST00000571961 ZNF174Q15697 407 aa18.26■□□□□ 0.51
JRK-203ENST00000571961 GOLGA1Q92805 767 aa18.26■□□□□ 0.51
JRK-203ENST00000571961 MTA3Q9BTC8 594 aa18.26■□□□□ 0.51
JRK-203ENST00000571961 ZCCHC17Q9NP64 241 aaKnown RBP18.26■□□□□ 0.51
JRK-203ENST00000571961 ADD3Q9UEY8 706 aaKnown RBP18.26■□□□□ 0.51
JRK-203ENST00000571961 ADGRG1Q9Y653 693 aa18.26■□□□□ 0.51
JRK-203ENST00000571961 SLIT2O94813 1529 aa18.26■□□□□ 0.51
JRK-203ENST00000571961 TOM1O60784 492 aa18.26■□□□□ 0.51
JRK-203ENST00000571961 RCAN1P53805 252 aa18.26■□□□□ 0.51
JRK-203ENST00000571961 RABGGTAQ92696 567 aa18.26■□□□□ 0.51
JRK-203ENST00000571961 PHF20Q9BVI0 1012 aa18.26■□□□□ 0.51
JRK-203ENST00000571961 ARFGAP3Q9NP61 516 aa18.26■□□□□ 0.51
JRK-203ENST00000571961 ROBO1Q9Y6N7 1651 aa18.26■□□□□ 0.51
JRK-203ENST00000571961 CYP2D7A0A087X1C5 515 aa18.26■□□□□ 0.51
JRK-203ENST00000571961 ATP8B1O43520 1251 aa18.26■□□□□ 0.51
JRK-203ENST00000571961 SH3RF1Q7Z6J0 888 aa18.26■□□□□ 0.51
JRK-203ENST00000571961 CREBRFQ8IUR6 639 aa18.26■□□□□ 0.51
JRK-203ENST00000571961 ENAHQ8N8S7 591 aaPredicted RBP18.26■□□□□ 0.51
JRK-203ENST00000571961 LRP5O75197 1615 aa18.25■□□□□ 0.51
JRK-203ENST00000571961 RTL9Q8NET4 1388 aa18.25■□□□□ 0.51
JRK-203ENST00000571961 ARAP2Q8WZ64 1704 aa18.25■□□□□ 0.51
JRK-203ENST00000571961 ITGB4P16144 1822 aa18.25■□□□□ 0.51
JRK-203ENST00000571961 DPYDQ12882 1025 aa18.25■□□□□ 0.51
JRK-203ENST00000571961 BCL9O00512 1426 aa18.25■□□□□ 0.51
JRK-203ENST00000571961 PPP1R3GB7ZBB8 358 aa18.25■□□□□ 0.51
JRK-203ENST00000571961 OAS2P29728 719 aaKnown RBP18.25■□□□□ 0.51
JRK-203ENST00000571961 CASP14P31944 242 aa18.25■□□□□ 0.51
JRK-203ENST00000571961 IGHMBP2P38935 993 aaKnown RBP18.25■□□□□ 0.51
JRK-203ENST00000571961 CDKAL1Q5VV42 579 aa18.25■□□□□ 0.51
JRK-203ENST00000571961 BTG4Q9NY30 223 aa18.25■□□□□ 0.51
JRK-203ENST00000571961 ZKSCAN7Q9P0L1 754 aaPredicted RBP18.25■□□□□ 0.51
JRK-203ENST00000571961 PUF60Q9UHX1 559 aaKnown RBP18.25■□□□□ 0.51
JRK-203ENST00000571961 MAGEB6P1A0A0J9YX57 407 aa18.24■□□□□ 0.51
JRK-203ENST00000571961 PBX1P40424 430 aa18.24■□□□□ 0.51
JRK-203ENST00000571961 ZSCAN10Q96SZ4 725 aaPredicted RBP18.24■□□□□ 0.51
JRK-203ENST00000571961 CTNND2Q9UQB3 1225 aa18.24■□□□□ 0.51
JRK-203ENST00000571961 MYH6P13533 1939 aa18.24■□□□□ 0.51
JRK-203ENST00000571961 MFAP3LO75121 409 aa18.24■□□□□ 0.51
JRK-203ENST00000571961 CCT6AP40227 531 aaKnown RBP18.24■□□□□ 0.51
JRK-203ENST00000571961 CHRNDQ07001 517 aa18.24■□□□□ 0.51
JRK-203ENST00000571961 FUT2Q10981 343 aa18.24■□□□□ 0.51
JRK-203ENST00000571961 SMC1AQ14683 1233 aaKnown RBP18.24■□□□□ 0.51
JRK-203ENST00000571961 FILIP1LQ4L180 1135 aa18.24■□□□□ 0.51
JRK-203ENST00000571961 IFIT1BQ5T764 474 aaKnown RBP18.24■□□□□ 0.51
JRK-203ENST00000571961 AK7Q96M32 723 aa18.24■□□□□ 0.51
JRK-203ENST00000571961 GSDMAQ96QA5 445 aa18.24■□□□□ 0.51
JRK-203ENST00000571961 BLZF1Q9H2G9 400 aa18.24■□□□□ 0.51
JRK-203ENST00000571961 PRPF3O43395 683 aaKnown RBP18.23■□□□□ 0.51
JRK-203ENST00000571961 KIF5CO60282 957 aa18.23■□□□□ 0.51
JRK-203ENST00000571961 TXLNAP40222 546 aa18.23■□□□□ 0.51
JRK-203ENST00000571961 ZNF569Q5MCW4 686 aa18.23■□□□□ 0.51
JRK-203ENST00000571961 CATIPQ7Z7H3 387 aa18.23■□□□□ 0.51
JRK-203ENST00000571961 NAA15Q9BXJ9 866 aaKnown RBP18.23■□□□□ 0.51
JRK-203ENST00000571961 UBXN6Q9BZV1 441 aa18.23■□□□□ 0.51
JRK-203ENST00000571961 BCORQ6W2J9 1755 aa18.23■□□□□ 0.51
JRK-203ENST00000571961 FXR1P51114 621 aaKnown RBP eCLIP18.23■□□□□ 0.51
JRK-203ENST00000571961 CHMP4BP1P59074 171 aa18.23■□□□□ 0.51
JRK-203ENST00000571961 CCDC152Q4G0S7 254 aa18.23■□□□□ 0.51
JRK-203ENST00000571961 CT47A1Q5JQC4 288 aaPredicted RBP18.23■□□□□ 0.51
JRK-203ENST00000571961 FERMT2Q96AC1 680 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 152.6 ms