RNA–Protein interactions for RNA: ENST00000571190.1

CIITA-206, Transcript of class II major histocompatibility complex transactivator, humanhuman

Gene CIITA, Length 479 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-206ENST00000571190 USP17L20D6RJB6 530 aa21.33■■□□□ 1.01
CIITA-206ENST00000571190 USP17L24Q0WX57 530 aa21.33■■□□□ 1.01
CIITA-206ENST00000571190 CCL14Q16627 93 aa21.33■■□□□ 1.01
CIITA-206ENST00000571190 ABCB5Q2M3G0 1257 aa21.33■■□□□ 1.01
CIITA-206ENST00000571190 SLC9C2Q5TAH2 1124 aa21.33■■□□□ 1.01
CIITA-206ENST00000571190 CATSPERGQ6ZRH7 1159 aa21.33■■□□□ 1.01
CIITA-206ENST00000571190 ZBTB40Q9NUA8 1239 aa21.33■■□□□ 1.01
CIITA-206ENST00000571190 APBB1O00213 710 aa21.32■■□□□ 1
CIITA-206ENST00000571190 CACNB2Q08289 660 aaPredicted RBP21.32■■□□□ 1
CIITA-206ENST00000571190 TTF1Q15361 905 aaPredicted RBP21.32■■□□□ 1
CIITA-206ENST00000571190 PLEKHH3Q7Z736 793 aa21.32■■□□□ 1
CIITA-206ENST00000571190 RPAP2Q8IXW5 612 aaPredicted RBP21.32■■□□□ 1
CIITA-206ENST00000571190 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.32■■□□□ 1
CIITA-206ENST00000571190 KIF1BPQ96EK5 621 aa21.32■■□□□ 1
CIITA-206ENST00000571190 EDC3Q96F86 508 aaKnown RBP21.32■■□□□ 1
CIITA-206ENST00000571190 STAP2Q9UGK3 403 aa21.32■■□□□ 1
CIITA-206ENST00000571190 RABGAP1Q9Y3P9 1069 aa21.32■■□□□ 1
CIITA-206ENST00000571190 ATAD5Q96QE3 1844 aa21.32■■□□□ 1
CIITA-206ENST00000571190 ZNF532Q9HCE3 1301 aa21.31■■□□□ 1
CIITA-206ENST00000571190 VCAM1P19320 739 aa21.31■■□□□ 1
CIITA-206ENST00000571190 USP14P54578 494 aa21.31■■□□□ 1
CIITA-206ENST00000571190 PDE3AQ14432 1141 aa21.31■■□□□ 1
CIITA-206ENST00000571190 CLASRPQ8N2M8 674 aaKnown RBP21.31■■□□□ 1
CIITA-206ENST00000571190 FEZ1Q99689 392 aa21.31■■□□□ 1
CIITA-206ENST00000571190 COG6Q9Y2V7 657 aa21.31■■□□□ 1
CIITA-206ENST00000571190 A0A1W2PRG0 241 aa21.3■■□□□ 1
CIITA-206ENST00000571190 GOLIM4O00461 696 aa21.3■■□□□ 1
CIITA-206ENST00000571190 POLR3DP05423 398 aaPredicted RBP21.3■■□□□ 1
CIITA-206ENST00000571190 ZKSCAN1P17029 563 aaPredicted RBP21.3■■□□□ 1
CIITA-206ENST00000571190 SEPT2Q15019 361 aa21.3■■□□□ 1
CIITA-206ENST00000571190 SLFNL1Q499Z3 407 aa21.3■■□□□ 1
CIITA-206ENST00000571190 LHX8Q68G74 356 aa21.3■■□□□ 1
CIITA-206ENST00000571190 LBX2Q6XYB7 198 aa21.3■■□□□ 1
CIITA-206ENST00000571190 TRMT44Q8IYL2 757 aaKnown RBP21.3■■□□□ 1
CIITA-206ENST00000571190 LCORLQ8N3X6 602 aa21.3■■□□□ 1
CIITA-206ENST00000571190 DNAJC2Q99543 621 aaKnown RBP21.3■■□□□ 1
CIITA-206ENST00000571190 NBPF3Q9H094 633 aa21.3■■□□□ 1
CIITA-206ENST00000571190 CABP5Q9NP86 173 aa21.3■■□□□ 1
CIITA-206ENST00000571190 BTBD7Q9P203 1132 aa21.3■■□□□ 1
CIITA-206ENST00000571190 RANBP2P49792 3224 aaKnown RBP21.3■■□□□ 1
CIITA-206ENST00000571190 CYP2D6P10635 497 aa21.29■■□□□ 1
CIITA-206ENST00000571190 CCND3P30281 292 aaPredicted RBP21.29■■□□□ 1
CIITA-206ENST00000571190 RGS2P41220 211 aa21.29■■□□□ 1
CIITA-206ENST00000571190 SDR42E1Q8WUS8 393 aa21.29■■□□□ 1
CIITA-206ENST00000571190 APBA2Q99767 749 aa21.29■■□□□ 1
CIITA-206ENST00000571190 CRNKL1Q9BZJ0 848 aaKnown RBP21.29■■□□□ 1
CIITA-206ENST00000571190 DCP1AQ9NPI6 582 aaPredicted RBP21.29■■□□□ 1
CIITA-206ENST00000571190 MCM9Q9NXL9 1143 aa21.29■■□□□ 1
CIITA-206ENST00000571190 CEP290O15078 2479 aa21.29■■□□□ 1
CIITA-206ENST00000571190 TRIOBPQ9H2D6 2365 aa21.29■■□□□ 1
CIITA-206ENST00000571190 PFASO15067 1338 aa21.29■■□□□ 1
CIITA-206ENST00000571190 PLXNB2O15031 1838 aa21.28■■□□□ 1
CIITA-206ENST00000571190 FOCADQ5VW36 1801 aa21.28■■□□□ 1
CIITA-206ENST00000571190 SPDYE16A6NNV3 312 aaPredicted RBP21.28■■□□□ 1
CIITA-206ENST00000571190 SOX1O00570 391 aaPredicted RBP21.28■■□□□ 1
CIITA-206ENST00000571190 MS4A1P11836 297 aa21.28■■□□□ 1
CIITA-206ENST00000571190 MAP2K5Q13163 448 aa21.28■■□□□ 1
CIITA-206ENST00000571190 CCAR1Q8IX12 1150 aaKnown RBP21.28■■□□□ 1
CIITA-206ENST00000571190 C7orf61Q8IZ16 206 aa21.28■■□□□ 1
CIITA-206ENST00000571190 GDF15Q99988 308 aa21.28■■□□□ 1
CIITA-206ENST00000571190 C11orf49Q9H6J7 331 aa21.28■■□□□ 1
CIITA-206ENST00000571190 RPAP3Q9H6T3 665 aaPredicted RBP21.28■■□□□ 1
CIITA-206ENST00000571190 FLRT1Q9NZU1 646 aa21.28■■□□□ 1
CIITA-206ENST00000571190 MYO5AQ9Y4I1 1855 aaKnown RBP21.28■■□□□ 1
CIITA-206ENST00000571190 CDK5RAP2Q96SN8 1893 aa21.27■■□□□ 1
CIITA-206ENST00000571190 A0A1W2PPC1 479 aa21.27■■□□□ 1
CIITA-206ENST00000571190 IFIT2P09913 472 aaKnown RBP21.27■■□□□ 1
CIITA-206ENST00000571190 COL6A1P12109 1028 aa21.27■■□□□ 1
CIITA-206ENST00000571190 SLC44A5Q8NCS7 719 aa21.27■■□□□ 1
CIITA-206ENST00000571190 ZMYND8Q9ULU4 1186 aaPredicted RBP21.27■■□□□ 1
CIITA-206ENST00000571190 DDX19BQ9UMR2 479 aa21.27■■□□□ 1
CIITA-206ENST00000571190 DOCK3Q8IZD9 2030 aa21.27■■□□□ 1
CIITA-206ENST00000571190 SMIM22K7EJ46 135 aa21.26■□□□□ 0.99
CIITA-206ENST00000571190 PRKAB2O43741 272 aa21.26■□□□□ 0.99
CIITA-206ENST00000571190 RAB11FIP3O75154 756 aa21.26■□□□□ 0.99
CIITA-206ENST00000571190 HMMRO75330 724 aa21.26■□□□□ 0.99
CIITA-206ENST00000571190 CHGBP05060 677 aa21.26■□□□□ 0.99
CIITA-206ENST00000571190 PTPREP23469 700 aa21.26■□□□□ 0.99
CIITA-206ENST00000571190 CCNA1P78396 465 aa21.26■□□□□ 0.99
CIITA-206ENST00000571190 KIAA1755Q5JYT7 1200 aa21.26■□□□□ 0.99
CIITA-206ENST00000571190 SIAH1Q8IUQ4 282 aa21.26■□□□□ 0.99
CIITA-206ENST00000571190 ARMT1Q9H993 441 aa21.26■□□□□ 0.99
CIITA-206ENST00000571190 SLC15A5A6NIM6 579 aa21.25■□□□□ 0.99
CIITA-206ENST00000571190 IGHA2P01877 340 aa21.25■□□□□ 0.99
CIITA-206ENST00000571190 DYNLL2Q96FJ2 89 aa21.25■□□□□ 0.99
CIITA-206ENST00000571190 BCL11AQ9H165 835 aa21.25■□□□□ 0.99
CIITA-206ENST00000571190 BOLA2Q9H3K6 86 aa21.25■□□□□ 0.99
CIITA-206ENST00000571190 HOXC6P09630 235 aa21.24■□□□□ 0.99
CIITA-206ENST00000571190 ATP5JP18859 108 aa21.24■□□□□ 0.99
CIITA-206ENST00000571190 ADD2P35612 726 aa21.24■□□□□ 0.99
CIITA-206ENST00000571190 NPLOC4Q8TAT6 608 aa21.24■□□□□ 0.99
CIITA-206ENST00000571190 PAG1Q9NWQ8 432 aa21.24■□□□□ 0.99
CIITA-206ENST00000571190 SZT2Q5T011 3432 aa21.23■□□□□ 0.99
CIITA-206ENST00000571190 MPHOSPH10O00566 681 aaKnown RBP21.23■□□□□ 0.99
CIITA-206ENST00000571190 MBD4O95243 580 aa21.23■□□□□ 0.99
CIITA-206ENST00000571190 SYN1P17600 705 aa21.23■□□□□ 0.99
CIITA-206ENST00000571190 BMP8BP34820 402 aa21.23■□□□□ 0.99
CIITA-206ENST00000571190 GRB14Q14449 540 aa21.23■□□□□ 0.99
CIITA-206ENST00000571190 LRCH3Q96II8 777 aa21.23■□□□□ 0.99
CIITA-206ENST00000571190 DDX60LQ5H9U9 1706 aaKnown RBP21.23■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms