RNA–Protein interactions for RNA: ENST00000564678.1

HERPUD1-209, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best)

Gene HERPUD1, Length 2,199 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-209ENST00000564678 LY75O60449 1722 aa8.39□□□□□ -1.07
HERPUD1-209ENST00000564678 GOLGA8AA7E2F4 631 aa8.39□□□□□ -1.07
HERPUD1-209ENST00000564678 PARNO95453 639 aaKnown RBP8.39□□□□□ -1.07
HERPUD1-209ENST00000564678 ADCY5O95622 1261 aa8.39□□□□□ -1.07
HERPUD1-209ENST00000564678 TPM3P06753 285 aa8.39□□□□□ -1.07
HERPUD1-209ENST00000564678 FGRP09769 529 aa8.39□□□□□ -1.07
HERPUD1-209ENST00000564678 CDC27P30260 824 aa8.39□□□□□ -1.07
HERPUD1-209ENST00000564678 TM4SF1P30408 202 aa8.39□□□□□ -1.07
HERPUD1-209ENST00000564678 RFC4P35249 363 aa8.39□□□□□ -1.07
HERPUD1-209ENST00000564678 ME1P48163 572 aa8.39□□□□□ -1.07
HERPUD1-209ENST00000564678 KCNQ4P56696 695 aa8.39□□□□□ -1.07
HERPUD1-209ENST00000564678 CEBPZQ03701 1054 aaKnown RBP8.39□□□□□ -1.07
HERPUD1-209ENST00000564678 SSRP1Q08945 709 aaKnown RBP8.39□□□□□ -1.07
HERPUD1-209ENST00000564678 SNW1Q13573 536 aaKnown RBP8.39□□□□□ -1.07
HERPUD1-209ENST00000564678 WTAPQ15007 396 aa8.39□□□□□ -1.07
HERPUD1-209ENST00000564678 PTF1AQ7RTS3 328 aa8.39□□□□□ -1.07
HERPUD1-209ENST00000564678 ESR2Q92731 530 aa8.39□□□□□ -1.07
HERPUD1-209ENST00000564678 SRP68Q9UHB9 627 aaKnown RBP8.39□□□□□ -1.07
HERPUD1-209ENST00000564678 USP25Q9UHP3 1055 aa8.39□□□□□ -1.07
HERPUD1-209ENST00000564678 PCDHA7Q9UN72 937 aa8.39□□□□□ -1.07
HERPUD1-209ENST00000564678 CASZ1Q86V15 1759 aa8.39□□□□□ -1.07
HERPUD1-209ENST00000564678 TAF1LQ8IZX4 1826 aa8.39□□□□□ -1.07
HERPUD1-209ENST00000564678 CACNA1SQ13698 1873 aa8.38□□□□□ -1.07
HERPUD1-209ENST00000564678 SPTLC2O15270 562 aa8.38□□□□□ -1.07
HERPUD1-209ENST00000564678 KINO60870 393 aaKnown RBP8.38□□□□□ -1.07
HERPUD1-209ENST00000564678 FMNL1O95466 1100 aaPredicted RBP8.38□□□□□ -1.07
HERPUD1-209ENST00000564678 PTMAP06454 111 aaKnown RBP8.38□□□□□ -1.07
HERPUD1-209ENST00000564678 U2AF2P26368 475 aaKnown RBP eCLIP8.38□□□□□ -1.075e-10■■□□□ 14.2
HERPUD1-209ENST00000564678 TRIM29Q14134 588 aa8.38□□□□□ -1.07
HERPUD1-209ENST00000564678 STK38Q15208 465 aa8.38□□□□□ -1.07
HERPUD1-209ENST00000564678 PADI6Q6TGC4 694 aa8.38□□□□□ -1.07
HERPUD1-209ENST00000564678 MICU3Q86XE3 530 aa8.38□□□□□ -1.07
HERPUD1-209ENST00000564678 MIGA1Q8NAN2 632 aa8.38□□□□□ -1.07
HERPUD1-209ENST00000564678 MRPS27Q92552 414 aaKnown RBP8.38□□□□□ -1.07
HERPUD1-209ENST00000564678 TINF2Q9BSI4 451 aa8.38□□□□□ -1.07
HERPUD1-209ENST00000564678 LEMD3Q9Y2U8 911 aa8.38□□□□□ -1.07
HERPUD1-209ENST00000564678 TAF1P21675 1872 aa8.38□□□□□ -1.07
HERPUD1-209ENST00000564678 PPP1R3GB7ZBB8 358 aa8.38□□□□□ -1.07
HERPUD1-209ENST00000564678 PPP6R2O75170 966 aa8.38□□□□□ -1.07
HERPUD1-209ENST00000564678 PEX14O75381 377 aa8.38□□□□□ -1.07
HERPUD1-209ENST00000564678 POLR3DP05423 398 aaPredicted RBP8.38□□□□□ -1.07
HERPUD1-209ENST00000564678 SEMA3FQ13275 785 aa8.38□□□□□ -1.07
HERPUD1-209ENST00000564678 ZNF211Q13398 564 aaPredicted RBP8.38□□□□□ -1.07
HERPUD1-209ENST00000564678 SLC39A14Q15043 492 aa8.38□□□□□ -1.07
HERPUD1-209ENST00000564678 ANO1Q5XXA6 986 aa8.38□□□□□ -1.07
HERPUD1-209ENST00000564678 SPTY2D1Q68D10 685 aaPredicted RBP8.38□□□□□ -1.07
HERPUD1-209ENST00000564678 KRT40Q6A162 431 aa8.38□□□□□ -1.07
HERPUD1-209ENST00000564678 CKAP2LQ8IYA6 745 aa8.38□□□□□ -1.07
HERPUD1-209ENST00000564678 TRIM22Q8IYM9 498 aa8.38□□□□□ -1.07
HERPUD1-209ENST00000564678 JMYQ8N9B5 988 aa8.38□□□□□ -1.07
HERPUD1-209ENST00000564678 NKX2-3Q8TAU0 364 aa8.38□□□□□ -1.07
HERPUD1-209ENST00000564678 NSUN4Q96CB9 384 aaKnown RBP8.38□□□□□ -1.07
HERPUD1-209ENST00000564678 TRPC5Q9UL62 973 aaPredicted RBP8.38□□□□□ -1.07
HERPUD1-209ENST00000564678 TACC3Q9Y6A5 838 aa8.38□□□□□ -1.07
HERPUD1-209ENST00000564678 COL4A1P02462 1669 aa8.38□□□□□ -1.07
HERPUD1-209ENST00000564678 SBF2Q86WG5 1849 aa8.38□□□□□ -1.07
HERPUD1-209ENST00000564678 OATP04181 439 aa8.37□□□□□ -1.07
HERPUD1-209ENST00000564678 RTN1Q16799 776 aa8.37□□□□□ -1.07
HERPUD1-209ENST00000564678 ANO6Q4KMQ2 910 aa8.37□□□□□ -1.07
HERPUD1-209ENST00000564678 OTUD7BQ6GQQ9 843 aa8.37□□□□□ -1.07
HERPUD1-209ENST00000564678 SDE2Q6IQ49 451 aa8.37□□□□□ -1.07
HERPUD1-209ENST00000564678 C15orf52Q6ZUT6 534 aaKnown RBP8.37□□□□□ -1.07
HERPUD1-209ENST00000564678 ADGRA1Q86SQ6 560 aa8.37□□□□□ -1.07
HERPUD1-209ENST00000564678 FMR1NBQ8N0W7 255 aaPredicted RBP8.37□□□□□ -1.07
HERPUD1-209ENST00000564678 DEPDC4Q8N2C3 294 aa8.37□□□□□ -1.07
HERPUD1-209ENST00000564678 FSIP1Q8NA03 581 aa8.37□□□□□ -1.07
HERPUD1-209ENST00000564678 UBAC1Q9BSL1 405 aa8.37□□□□□ -1.07
HERPUD1-209ENST00000564678 INCENPQ9NQS7 918 aa8.37□□□□□ -1.07
HERPUD1-209ENST00000564678 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.37□□□□□ -1.07
HERPUD1-209ENST00000564678 TOMM22Q9NS69 142 aa8.37□□□□□ -1.07
HERPUD1-209ENST00000564678 ATP8A2Q9NTI2 1148 aa8.37□□□□□ -1.07
HERPUD1-209ENST00000564678 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.37□□□□□ -1.07
HERPUD1-209ENST00000564678 PRKAG2Q9UGJ0 569 aa8.37□□□□□ -1.07
HERPUD1-209ENST00000564678 COL1A1P02452 1464 aaPredicted RBP8.37□□□□□ -1.07
HERPUD1-209ENST00000564678 GOLGA6L6A8MZA4 724 aa8.37□□□□□ -1.07
HERPUD1-209ENST00000564678 PPFIA3O75145 1194 aa8.37□□□□□ -1.07
HERPUD1-209ENST00000564678 DEXIO95424 95 aa8.37□□□□□ -1.07
HERPUD1-209ENST00000564678 CMA1P23946 247 aa8.37□□□□□ -1.07
HERPUD1-209ENST00000564678 GTF2F1P35269 517 aaKnown RBP eCLIP8.37□□□□□ -1.07
HERPUD1-209ENST00000564678 ZNF165P49910 485 aa8.37□□□□□ -1.07
HERPUD1-209ENST00000564678 GRAPQ13588 217 aa8.37□□□□□ -1.07
HERPUD1-209ENST00000564678 SAFBQ15424 915 aaKnown RBP eCLIP8.37□□□□□ -1.07
HERPUD1-209ENST00000564678 SBK1Q52WX2 424 aa8.37□□□□□ -1.07
HERPUD1-209ENST00000564678 RRP12Q5JTH9 1297 aaKnown RBP8.37□□□□□ -1.07
HERPUD1-209ENST00000564678 MEX3CQ5U5Q3 659 aaKnown RBP8.37□□□□□ -1.07
HERPUD1-209ENST00000564678 IQCA1Q86XH1 822 aa8.37□□□□□ -1.07
HERPUD1-209ENST00000564678 RAB11FIP4Q86YS3 637 aa8.37□□□□□ -1.07
HERPUD1-209ENST00000564678 FANCBQ8NB91 859 aa8.37□□□□□ -1.07
HERPUD1-209ENST00000564678 TDRD7Q8NHU6 1098 aaKnown RBP8.37□□□□□ -1.07
HERPUD1-209ENST00000564678 GRAPLQ8TC17 118 aaPredicted RBP8.37□□□□□ -1.07
HERPUD1-209ENST00000564678 SDR42E1Q8WUS8 393 aa8.37□□□□□ -1.07
HERPUD1-209ENST00000564678 CRNKL1Q9BZJ0 848 aaKnown RBP8.37□□□□□ -1.07
HERPUD1-209ENST00000564678 FTOQ9C0B1 505 aaKnown RBP eCLIP8.37□□□□□ -1.07
HERPUD1-209ENST00000564678 CBX8Q9HC52 389 aa8.37□□□□□ -1.07
HERPUD1-209ENST00000564678 SENP2Q9HC62 589 aa8.37□□□□□ -1.07
HERPUD1-209ENST00000564678 CLIC4Q9Y696 253 aa8.37□□□□□ -1.07
HERPUD1-209ENST00000564678 IRS2Q9Y4H2 1338 aa8.36□□□□□ -1.07
HERPUD1-209ENST00000564678 MINDY4BA8MYZ0 360 aa8.36□□□□□ -1.07
HERPUD1-209ENST00000564678 KIF28PB7ZC32 967 aa8.36□□□□□ -1.07
HERPUD1-209ENST00000564678 NPHP1O15259 732 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms