RNA–Protein interactions for RNA: ENST00000561817.5

CAPN3-210, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-210ENST00000561817 DIXDC1Q155Q3 683 aa7.68□□□□□ -1.18
CAPN3-210ENST00000561817 CERS5Q8N5B7 392 aa7.68□□□□□ -1.18
CAPN3-210ENST00000561817 ZNF622Q969S3 477 aaKnown RBP eCLIP7.68□□□□□ -1.18
CAPN3-210ENST00000561817 TMEM87BQ96K49 555 aa7.68□□□□□ -1.18
CAPN3-210ENST00000561817 SYT17Q9BSW7 474 aa7.68□□□□□ -1.18
CAPN3-210ENST00000561817 MTA3Q9BTC8 594 aa7.68□□□□□ -1.18
CAPN3-210ENST00000561817 LY9Q9HBG7 655 aa7.68□□□□□ -1.18
CAPN3-210ENST00000561817 DCP1AQ9NPI6 582 aaPredicted RBP7.68□□□□□ -1.18
CAPN3-210ENST00000561817 ATP8A2Q9NTI2 1148 aa7.68□□□□□ -1.18
CAPN3-210ENST00000561817 FAM217BQ9NTX9 383 aaPredicted RBP7.68□□□□□ -1.18
CAPN3-210ENST00000561817 AATFQ9NY61 560 aaKnown RBP eCLIP7.68□□□□□ -1.18
CAPN3-210ENST00000561817 ZSWIM5Q9P217 1185 aa7.68□□□□□ -1.18
CAPN3-210ENST00000561817 BCCIPQ9P287 314 aaKnown RBP eCLIP7.68□□□□□ -1.18
CAPN3-210ENST00000561817 MROH7-TTC4A0A0A0MT08 1334 aa7.68□□□□□ -1.18
CAPN3-210ENST00000561817 SCN9AQ15858 1988 aa7.68□□□□□ -1.18
CAPN3-210ENST00000561817 FOCADQ5VW36 1801 aa7.67□□□□□ -1.18
CAPN3-210ENST00000561817 ACTN4O43707 911 aaKnown RBP7.67□□□□□ -1.18
CAPN3-210ENST00000561817 ORC4O43929 436 aa7.67□□□□□ -1.18
CAPN3-210ENST00000561817 F13A1P00488 732 aa7.67□□□□□ -1.18
CAPN3-210ENST00000561817 CFHP08603 1231 aa7.67□□□□□ -1.18
CAPN3-210ENST00000561817 CYP2D6P10635 497 aa7.67□□□□□ -1.18
CAPN3-210ENST00000561817 DPEP1P16444 411 aa7.67□□□□□ -1.18
CAPN3-210ENST00000561817 LIFRP42702 1097 aa7.67□□□□□ -1.18
CAPN3-210ENST00000561817 TDO2P48775 406 aa7.67□□□□□ -1.18
CAPN3-210ENST00000561817 GSTO1P78417 241 aa7.67□□□□□ -1.18
CAPN3-210ENST00000561817 SEC23AQ15436 765 aa7.67□□□□□ -1.18
CAPN3-210ENST00000561817 GPR162Q16538 588 aa7.67□□□□□ -1.18
CAPN3-210ENST00000561817 SMYD5Q6GMV2 418 aa7.67□□□□□ -1.18
CAPN3-210ENST00000561817 DPP8Q6V1X1 898 aaPredicted RBP7.67□□□□□ -1.18
CAPN3-210ENST00000561817 RALYLQ86SE5 291 aaKnown RBP7.67□□□□□ -1.18
CAPN3-210ENST00000561817 DZIP1Q86YF9 867 aaKnown RBP7.67□□□□□ -1.18
CAPN3-210ENST00000561817 TMEM87AQ8NBN3 555 aa7.67□□□□□ -1.18
CAPN3-210ENST00000561817 SH3RF3Q8TEJ3 882 aaPredicted RBP7.67□□□□□ -1.18
CAPN3-210ENST00000561817 TBC1D22AQ8WUA7 517 aa7.67□□□□□ -1.18
CAPN3-210ENST00000561817 CNKSR1Q969H4 720 aa7.67□□□□□ -1.18
CAPN3-210ENST00000561817 CCDC97Q96F63 343 aaPredicted RBP7.67□□□□□ -1.18
CAPN3-210ENST00000561817 CRNKL1Q9BZJ0 848 aaKnown RBP7.67□□□□□ -1.18
CAPN3-210ENST00000561817 KRT23Q9C075 422 aa7.67□□□□□ -1.18
CAPN3-210ENST00000561817 CNNM2Q9H8M5 875 aa7.67□□□□□ -1.18
CAPN3-210ENST00000561817 NCOA5Q9HCD5 579 aaKnown RBP7.67□□□□□ -1.18
CAPN3-210ENST00000561817 ANGEL1Q9UNK9 670 aaKnown RBP7.67□□□□□ -1.18
CAPN3-210ENST00000561817 BCS1LQ9Y276 419 aa7.67□□□□□ -1.18
CAPN3-210ENST00000561817 SUGT1Q9Y2Z0 365 aa7.67□□□□□ -1.18
CAPN3-210ENST00000561817 TCHHQ07283 1943 aa7.67□□□□□ -1.18
CAPN3-210ENST00000561817 ROBO3Q96MS0 1386 aa7.67□□□□□ -1.18
CAPN3-210ENST00000561817 KLF18A0A0U1RQI7 1052 aa7.66□□□□□ -1.18
CAPN3-210ENST00000561817 PTPDC1A2A3K4 754 aa7.66□□□□□ -1.18
CAPN3-210ENST00000561817 USP17L12C9JPN9 530 aa7.66□□□□□ -1.18
CAPN3-210ENST00000561817 USP17L21D6R901 530 aa7.66□□□□□ -1.18
CAPN3-210ENST00000561817 KDM4AO75164 1064 aa7.66□□□□□ -1.18
CAPN3-210ENST00000561817 LDHCP07864 332 aa7.66□□□□□ -1.18
CAPN3-210ENST00000561817 PCP11498 1178 aaKnown RBP7.66□□□□□ -1.18
CAPN3-210ENST00000561817 PTMSP20962 102 aa7.66□□□□□ -1.18
CAPN3-210ENST00000561817 GTF2IP78347 998 aa7.66□□□□□ -1.18
CAPN3-210ENST00000561817 CCT2P78371 535 aaKnown RBP7.66□□□□□ -1.18
CAPN3-210ENST00000561817 TRDNQ13061 729 aa7.66□□□□□ -1.18
CAPN3-210ENST00000561817 HIC1Q14526 733 aa7.66□□□□□ -1.18
CAPN3-210ENST00000561817 NTRK3Q16288 839 aa7.66□□□□□ -1.18
CAPN3-210ENST00000561817 MFSD14BQ5SR56 506 aa7.66□□□□□ -1.18
CAPN3-210ENST00000561817 C12orf60Q5U649 245 aa7.66□□□□□ -1.18
CAPN3-210ENST00000561817 LARP1BQ659C4 914 aaKnown RBP7.66□□□□□ -1.18
CAPN3-210ENST00000561817 MCTP1Q6DN14 999 aa7.66□□□□□ -1.18
CAPN3-210ENST00000561817 TRAF7Q6Q0C0 670 aa7.66□□□□□ -1.18
CAPN3-210ENST00000561817 APOA5Q6Q788 366 aa7.66□□□□□ -1.18
CAPN3-210ENST00000561817 MFSD6Q6ZSS7 791 aa7.66□□□□□ -1.18
CAPN3-210ENST00000561817 CDC37L1Q7L3B6 337 aa7.66□□□□□ -1.18
CAPN3-210ENST00000561817 ZC3H12CQ9C0D7 883 aaKnown RBP7.66□□□□□ -1.18
CAPN3-210ENST00000561817 RNF41Q9H4P4 317 aaPredicted RBP7.66□□□□□ -1.18
CAPN3-210ENST00000561817 CD2APQ9Y5K6 639 aa7.66□□□□□ -1.18
CAPN3-210ENST00000561817 SBF1O95248 1867 aa7.66□□□□□ -1.18
CAPN3-210ENST00000561817 FER1L6Q2WGJ9 1857 aa7.66□□□□□ -1.18
CAPN3-210ENST00000561817 NAV1Q8NEY1 1877 aa7.66□□□□□ -1.18
CAPN3-210ENST00000561817 GOLGA8BA8MQT2 603 aa7.65□□□□□ -1.18
CAPN3-210ENST00000561817 MINDY4BA8MYZ0 360 aa7.65□□□□□ -1.18
CAPN3-210ENST00000561817 USP17L8P0C7I0 530 aa7.65□□□□□ -1.18
CAPN3-210ENST00000561817 PDCP20941 246 aa7.65□□□□□ -1.18
CAPN3-210ENST00000561817 COL4A5P29400 1685 aa7.65□□□□□ -1.18
CAPN3-210ENST00000561817 CDC27P30260 824 aa7.65□□□□□ -1.18
CAPN3-210ENST00000561817 BTDP43251 543 aa7.65□□□□□ -1.18
CAPN3-210ENST00000561817 RCAN1P53805 252 aa7.65□□□□□ -1.18
CAPN3-210ENST00000561817 FKBP1AP62942 108 aaKnown RBP7.65□□□□□ -1.18
CAPN3-210ENST00000561817 HMGN5P82970 282 aaKnown RBP7.65□□□□□ -1.18
CAPN3-210ENST00000561817 PDE4DQ08499 809 aa7.65□□□□□ -1.18
CAPN3-210ENST00000561817 RESTQ13127 1097 aa7.65□□□□□ -1.18
CAPN3-210ENST00000561817 PSME4Q14997 1843 aa7.65□□□□□ -1.18
CAPN3-210ENST00000561817 TMEM67Q5HYA8 995 aa7.65□□□□□ -1.18
CAPN3-210ENST00000561817 CC2D2BQ6DHV5 1058 aa7.65□□□□□ -1.18
CAPN3-210ENST00000561817 ADAMTSL1Q8N6G6 1762 aa7.65□□□□□ -1.18
CAPN3-210ENST00000561817 GPT2Q8TD30 523 aa7.65□□□□□ -1.18
CAPN3-210ENST00000561817 PXYLP1Q8TE99 480 aa7.65□□□□□ -1.18
CAPN3-210ENST00000561817 EYA3Q99504 573 aa7.65□□□□□ -1.18
CAPN3-210ENST00000561817 MXD3Q9BW11 206 aa7.65□□□□□ -1.18
CAPN3-210ENST00000561817 KCNQ5Q9NR82 932 aa7.65□□□□□ -1.18
CAPN3-210ENST00000561817 ARPP21Q9UBL0 812 aaPredicted RBP7.65□□□□□ -1.18
CAPN3-210ENST00000561817 DAGLAQ9Y4D2 1042 aa7.65□□□□□ -1.18
CAPN3-210ENST00000561817 DICER1Q9UPY3 1922 aaKnown RBP7.64□□□□□ -1.19
CAPN3-210ENST00000561817 ECM29Q5VYK3 1845 aa7.64□□□□□ -1.19
CAPN3-210ENST00000561817 IFIT3O14879 490 aaKnown RBP7.64□□□□□ -1.19
CAPN3-210ENST00000561817 BAG3O95817 575 aa7.64□□□□□ -1.19
CAPN3-210ENST00000561817 SLC10A3P09131 477 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms