RNA–Protein interactions for RNA: ENST00000557517.1

PSMC6-215, Transcript of proteasome 26S subunit, ATPase 6, humanhuman

TSL 3

Gene PSMC6, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC6-215ENST00000557517 MTMR2Q13614 643 aa12.82□□□□□ -0.36
PSMC6-215ENST00000557517 SHROOM1Q2M3G4 852 aaPredicted RBP12.82□□□□□ -0.36
PSMC6-215ENST00000557517 ANKRD13CQ8N6S4 541 aa12.82□□□□□ -0.36
PSMC6-215ENST00000557517 RAET1EQ8TD07 263 aa12.82□□□□□ -0.36
PSMC6-215ENST00000557517 PXYLP1Q8TE99 480 aa12.82□□□□□ -0.36
PSMC6-215ENST00000557517 EDC3Q96F86 508 aaKnown RBP12.82□□□□□ -0.36
PSMC6-215ENST00000557517 DNAJC2Q99543 621 aaKnown RBP12.82□□□□□ -0.36
PSMC6-215ENST00000557517 TRIM34Q9BYJ4 488 aa12.82□□□□□ -0.36
PSMC6-215ENST00000557517 EMILIN3Q9NT22 766 aa12.82□□□□□ -0.36
PSMC6-215ENST00000557517 PAG1Q9NWQ8 432 aa12.82□□□□□ -0.36
PSMC6-215ENST00000557517 TAOK2Q9UL54 1235 aa12.82□□□□□ -0.36
PSMC6-215ENST00000557517 GABRQQ9UN88 632 aa12.82□□□□□ -0.36
PSMC6-215ENST00000557517 MYPNQ86TC9 1320 aa12.82□□□□□ -0.36
PSMC6-215ENST00000557517 ZSWIM8A7E2V4 1837 aa12.81□□□□□ -0.36
PSMC6-215ENST00000557517 ECM2O94769 699 aaPredicted RBP12.81□□□□□ -0.36
PSMC6-215ENST00000557517 GDF11O95390 407 aa12.81□□□□□ -0.36
PSMC6-215ENST00000557517 GH2P01242 217 aa12.81□□□□□ -0.36
PSMC6-215ENST00000557517 ADD2P35612 726 aa12.81□□□□□ -0.36
PSMC6-215ENST00000557517 PSEN1P49768 467 aa12.81□□□□□ -0.36
PSMC6-215ENST00000557517 UBE3CQ15386 1083 aa12.81□□□□□ -0.36
PSMC6-215ENST00000557517 P2RX7Q99572 595 aaKnown RBP12.81□□□□□ -0.36
PSMC6-215ENST00000557517 CRNKL1Q9BZJ0 848 aaKnown RBP12.81□□□□□ -0.36
PSMC6-215ENST00000557517 DCP1AQ9NPI6 582 aaPredicted RBP12.81□□□□□ -0.36
PSMC6-215ENST00000557517 TMOD4Q9NZQ9 345 aa12.81□□□□□ -0.36
PSMC6-215ENST00000557517 MORF4L1Q9UBU8 362 aa12.81□□□□□ -0.36
PSMC6-215ENST00000557517 GJD2Q9UKL4 321 aa12.81□□□□□ -0.36
PSMC6-215ENST00000557517 MYH13Q9UKX3 1938 aa12.81□□□□□ -0.36
PSMC6-215ENST00000557517 TNPO2O14787 897 aaKnown RBP12.8□□□□□ -0.36
PSMC6-215ENST00000557517 SHMT1P34896 483 aa12.8□□□□□ -0.36
PSMC6-215ENST00000557517 MTFR1Q15390 333 aa12.8□□□□□ -0.36
PSMC6-215ENST00000557517 CERKLQ49MI3 558 aaPredicted RBP12.8□□□□□ -0.36
PSMC6-215ENST00000557517 C12orf42Q96LP6 360 aa12.8□□□□□ -0.36
PSMC6-215ENST00000557517 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.8□□□□□ -0.369e-8■■□□□ 11.6
PSMC6-215ENST00000557517 KIAA1683Q9H0B3 1180 aa12.8□□□□□ -0.36
PSMC6-215ENST00000557517 PRO3102Q9H379 93 aa12.8□□□□□ -0.36
PSMC6-215ENST00000557517 RBPJLQ9UBG7 517 aa12.8□□□□□ -0.36
PSMC6-215ENST00000557517 A0A0C4DFX4 3053 aa12.79□□□□□ -0.36
PSMC6-215ENST00000557517 SMARCA5O60264 1052 aaPredicted RBP12.79□□□□□ -0.36
PSMC6-215ENST00000557517 ADCY3O60266 1144 aa12.79□□□□□ -0.36
PSMC6-215ENST00000557517 POLR3DP05423 398 aaPredicted RBP12.79□□□□□ -0.36
PSMC6-215ENST00000557517 GJB1P08034 283 aa12.79□□□□□ -0.36
PSMC6-215ENST00000557517 ABCB5Q2M3G0 1257 aa12.79□□□□□ -0.36
PSMC6-215ENST00000557517 USP17L2Q6R6M4 530 aa12.79□□□□□ -0.36
PSMC6-215ENST00000557517 POTEEQ6S8J3 1075 aa12.79□□□□□ -0.36
PSMC6-215ENST00000557517 LCORLQ8N3X6 602 aa12.79□□□□□ -0.36
PSMC6-215ENST00000557517 NKX2-3Q8TAU0 364 aa12.79□□□□□ -0.36
PSMC6-215ENST00000557517 COA7Q96BR5 231 aa12.79□□□□□ -0.36
PSMC6-215ENST00000557517 ATP8A2Q9NTI2 1148 aa12.79□□□□□ -0.36
PSMC6-215ENST00000557517 ECHDC1Q9NTX5 307 aa12.79□□□□□ -0.36
PSMC6-215ENST00000557517 MCM9Q9NXL9 1143 aa12.79□□□□□ -0.36
PSMC6-215ENST00000557517 RBM27Q9P2N5 1060 aaKnown RBP12.79□□□□□ -0.36
PSMC6-215ENST00000557517 PCDHB15Q9Y5E8 787 aa12.79□□□□□ -0.36
PSMC6-215ENST00000557517 DLL1O00548 723 aa12.78□□□□□ -0.36
PSMC6-215ENST00000557517 CCL5P13501 91 aa12.78□□□□□ -0.36
PSMC6-215ENST00000557517 CAPN2P17655 700 aa12.78□□□□□ -0.36
PSMC6-215ENST00000557517 GUCY1A2P33402 732 aa12.78□□□□□ -0.36
PSMC6-215ENST00000557517 GJA8P48165 433 aa12.78□□□□□ -0.36
PSMC6-215ENST00000557517 HERVK_113P62684 666 aa12.78□□□□□ -0.36
PSMC6-215ENST00000557517 UBXN2AP68543 259 aa12.78□□□□□ -0.36
PSMC6-215ENST00000557517 SLFNL1Q499Z3 407 aa12.78□□□□□ -0.36
PSMC6-215ENST00000557517 GPRC5AQ8NFJ5 357 aa12.78□□□□□ -0.36
PSMC6-215ENST00000557517 SDR42E1Q8WUS8 393 aa12.78□□□□□ -0.36
PSMC6-215ENST00000557517 SHISA4Q96DD7 197 aa12.78□□□□□ -0.36
PSMC6-215ENST00000557517 ARMT1Q9H993 441 aa12.78□□□□□ -0.36
PSMC6-215ENST00000557517 CABP5Q9NP86 173 aa12.78□□□□□ -0.36
PSMC6-215ENST00000557517 PRKAB2O43741 272 aa12.77□□□□□ -0.37
PSMC6-215ENST00000557517 CHGBP05060 677 aa12.77□□□□□ -0.37
PSMC6-215ENST00000557517 USP14P54578 494 aa12.77□□□□□ -0.37
PSMC6-215ENST00000557517 IRX3P78415 501 aaPredicted RBP12.77□□□□□ -0.37
PSMC6-215ENST00000557517 Q3C1V9 767 aa12.77□□□□□ -0.37
PSMC6-215ENST00000557517 ZSCAN25Q6NSZ9 544 aa12.77□□□□□ -0.37
PSMC6-215ENST00000557517 UBE2Q1Q7Z7E8 422 aa12.77□□□□□ -0.37
PSMC6-215ENST00000557517 PDCD7Q8N8D1 485 aaKnown RBP12.77□□□□□ -0.37
PSMC6-215ENST00000557517 RNF208Q9H0X6 261 aa12.77□□□□□ -0.37
PSMC6-215ENST00000557517 BCL11AQ9H165 835 aa12.77□□□□□ -0.37
PSMC6-215ENST00000557517 TXNRD2Q9NNW7 524 aa12.77□□□□□ -0.37
PSMC6-215ENST00000557517 USP17L15C9J2P7 530 aa12.76□□□□□ -0.37
PSMC6-215ENST00000557517 USP17L13C9JLJ4 530 aa12.76□□□□□ -0.37
PSMC6-215ENST00000557517 USP17L11C9JVI0 530 aa12.76□□□□□ -0.37
PSMC6-215ENST00000557517 USP17L18D6R9N7 530 aa12.76□□□□□ -0.37
PSMC6-215ENST00000557517 USP17L22D6RA61 530 aa12.76□□□□□ -0.37
PSMC6-215ENST00000557517 USP17L17D6RBQ6 530 aa12.76□□□□□ -0.37
PSMC6-215ENST00000557517 USP17L19D6RCP7 530 aa12.76□□□□□ -0.37
PSMC6-215ENST00000557517 USP17L20D6RJB6 530 aa12.76□□□□□ -0.37
PSMC6-215ENST00000557517 MBD4O95243 580 aa12.76□□□□□ -0.37
PSMC6-215ENST00000557517 USP17L24Q0WX57 530 aa12.76□□□□□ -0.37
PSMC6-215ENST00000557517 RAB3GAP1Q15042 981 aa12.76□□□□□ -0.37
PSMC6-215ENST00000557517 C12orf60Q5U649 245 aa12.76□□□□□ -0.37
PSMC6-215ENST00000557517 LBX2Q6XYB7 198 aa12.76□□□□□ -0.37
PSMC6-215ENST00000557517 CATSPERGQ6ZRH7 1159 aa12.76□□□□□ -0.37
PSMC6-215ENST00000557517 SIAH1Q8IUQ4 282 aa12.76□□□□□ -0.37
PSMC6-215ENST00000557517 ACER1Q8TDN7 264 aa12.76□□□□□ -0.37
PSMC6-215ENST00000557517 GTF3C2Q8WUA4 911 aaPredicted RBP12.76□□□□□ -0.37
PSMC6-215ENST00000557517 SPOCK2Q92563 424 aa12.76□□□□□ -0.37
PSMC6-215ENST00000557517 TMEM121BQ9BXQ6 578 aaPredicted RBP12.76□□□□□ -0.37
PSMC6-215ENST00000557517 PUS7LQ9H0K6 701 aaKnown RBP12.76□□□□□ -0.37
PSMC6-215ENST00000557517 BIN2Q9UBW5 565 aaPredicted RBP12.76□□□□□ -0.37
PSMC6-215ENST00000557517 SWAP70Q9UH65 585 aa12.76□□□□□ -0.37
PSMC6-215ENST00000557517 COL6A3P12111 3177 aa12.75□□□□□ -0.37
PSMC6-215ENST00000557517 A0A1W2PRG0 241 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms