RNA–Protein interactions for RNA: ENST00000554534.5

PCNX4-208, Transcript of pecanex 4, humanhuman

TSL 3

Gene PCNX4, Length 357 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-208ENST00000554534 APBB1O00213 710 aa8.21□□□□□ -1.1
PCNX4-208ENST00000554534 NPM3O75607 178 aaKnown RBP8.21□□□□□ -1.1
PCNX4-208ENST00000554534 BAG3O95817 575 aa8.21□□□□□ -1.1
PCNX4-208ENST00000554534 UQCRFS1P1P0C7P4 283 aa8.21□□□□□ -1.1
PCNX4-208ENST00000554534 CYP2D6P10635 497 aa8.21□□□□□ -1.1
PCNX4-208ENST00000554534 MAPK4P31152 587 aa8.21□□□□□ -1.1
PCNX4-208ENST00000554534 RGS2P41220 211 aa8.21□□□□□ -1.1
PCNX4-208ENST00000554534 USP5P45974 858 aa8.21□□□□□ -1.1
PCNX4-208ENST00000554534 PPP4CP60510 307 aa8.21□□□□□ -1.1
PCNX4-208ENST00000554534 ATP2B2Q01814 1243 aa8.21□□□□□ -1.1
PCNX4-208ENST00000554534 MAP2K5Q13163 448 aa8.21□□□□□ -1.1
PCNX4-208ENST00000554534 SHHQ15465 462 aa8.21□□□□□ -1.1
PCNX4-208ENST00000554534 LRIT3Q3SXY7 679 aa8.21□□□□□ -1.1
PCNX4-208ENST00000554534 KIAA1755Q5JYT7 1200 aa8.21□□□□□ -1.1
PCNX4-208ENST00000554534 USP17L2Q6R6M4 530 aa8.21□□□□□ -1.1
PCNX4-208ENST00000554534 SH3RF1Q7Z6J0 888 aa8.21□□□□□ -1.1
PCNX4-208ENST00000554534 FOXP4Q8IVH2 680 aaPredicted RBP8.21□□□□□ -1.1
PCNX4-208ENST00000554534 MAGEB6Q8N7X4 407 aa8.21□□□□□ -1.1
PCNX4-208ENST00000554534 PRDM5Q9NQX1 630 aaPredicted RBP8.21□□□□□ -1.1
PCNX4-208ENST00000554534 STXBP5LQ9Y2K9 1186 aa8.21□□□□□ -1.1
PCNX4-208ENST00000554534 PDS5AQ29RF7 1337 aaKnown RBP8.21□□□□□ -1.1
PCNX4-208ENST00000554534 FOCADQ5VW36 1801 aa8.2□□□□□ -1.1
PCNX4-208ENST00000554534 PRUNE2Q8WUY3 3088 aa8.2□□□□□ -1.1
PCNX4-208ENST00000554534 USP17L15C9J2P7 530 aa8.2□□□□□ -1.1
PCNX4-208ENST00000554534 C19orf81C9J6K1 198 aa8.2□□□□□ -1.1
PCNX4-208ENST00000554534 USP17L13C9JLJ4 530 aa8.2□□□□□ -1.1
PCNX4-208ENST00000554534 USP17L11C9JVI0 530 aa8.2□□□□□ -1.1
PCNX4-208ENST00000554534 USP17L18D6R9N7 530 aa8.2□□□□□ -1.1
PCNX4-208ENST00000554534 USP17L22D6RA61 530 aa8.2□□□□□ -1.1
PCNX4-208ENST00000554534 USP17L17D6RBQ6 530 aa8.2□□□□□ -1.1
PCNX4-208ENST00000554534 USP17L19D6RCP7 530 aa8.2□□□□□ -1.1
PCNX4-208ENST00000554534 USP17L20D6RJB6 530 aa8.2□□□□□ -1.1
PCNX4-208ENST00000554534 MPHOSPH10O00566 681 aaKnown RBP8.2□□□□□ -1.1
PCNX4-208ENST00000554534 CHGBP05060 677 aa8.2□□□□□ -1.1
PCNX4-208ENST00000554534 PTPREP23469 700 aa8.2□□□□□ -1.1
PCNX4-208ENST00000554534 GUCY1A2P33402 732 aa8.2□□□□□ -1.1
PCNX4-208ENST00000554534 RTP1P59025 263 aa8.2□□□□□ -1.1
PCNX4-208ENST00000554534 USP17L24Q0WX57 530 aa8.2□□□□□ -1.1
PCNX4-208ENST00000554534 MTX1Q13505 466 aa8.2□□□□□ -1.1
PCNX4-208ENST00000554534 SEPT2Q15019 361 aa8.2□□□□□ -1.1
PCNX4-208ENST00000554534 CERKLQ49MI3 558 aaPredicted RBP8.2□□□□□ -1.1
PCNX4-208ENST00000554534 CCDC158Q5M9N0 1113 aa8.2□□□□□ -1.1
PCNX4-208ENST00000554534 CATSPERGQ6ZRH7 1159 aa8.2□□□□□ -1.1
PCNX4-208ENST00000554534 BADQ92934 168 aa8.2□□□□□ -1.1
PCNX4-208ENST00000554534 EAF2Q96CJ1 260 aaPredicted RBP8.2□□□□□ -1.1
PCNX4-208ENST00000554534 LBHD1Q9BQE6 289 aaPredicted RBP8.2□□□□□ -1.1
PCNX4-208ENST00000554534 DHX36Q9H2U1 1008 aaKnown RBP8.2□□□□□ -1.1
PCNX4-208ENST00000554534 RPAP3Q9H6T3 665 aaPredicted RBP8.2□□□□□ -1.1
PCNX4-208ENST00000554534 DBNLQ9UJU6 430 aaKnown RBP8.2□□□□□ -1.1
PCNX4-208ENST00000554534 ZNFX1Q9P2E3 1918 aaKnown RBP8.2□□□□□ -1.1
PCNX4-208ENST00000554534 A0A1W2PRG0 241 aa8.19□□□□□ -1.1
PCNX4-208ENST00000554534 POTEB2H3BUK9 544 aa8.19□□□□□ -1.1
PCNX4-208ENST00000554534 RBAK-RBAKDNI3L0D1 243 aa8.19□□□□□ -1.1
PCNX4-208ENST00000554534 COBLO75128 1261 aa8.19□□□□□ -1.1
PCNX4-208ENST00000554534 HLA-DOAP06340 250 aa8.19□□□□□ -1.1
PCNX4-208ENST00000554534 XRCC5P13010 732 aaKnown RBP8.19□□□□□ -1.1
PCNX4-208ENST00000554534 VCAM1P19320 739 aa8.19□□□□□ -1.1
PCNX4-208ENST00000554534 SHMT1P34896 483 aa8.19□□□□□ -1.1
PCNX4-208ENST00000554534 ADCYAP1R1P41586 468 aa8.19□□□□□ -1.1
PCNX4-208ENST00000554534 ATP8B2P98198 1209 aa8.19□□□□□ -1.1
PCNX4-208ENST00000554534 MAPK8IP2Q13387 824 aaPredicted RBP8.19□□□□□ -1.1
PCNX4-208ENST00000554534 PLS1Q14651 629 aa8.19□□□□□ -1.1
PCNX4-208ENST00000554534 ABCB5Q2M3G0 1257 aa8.19□□□□□ -1.1
PCNX4-208ENST00000554534 MFSD14CQ5VZR4 134 aa8.19□□□□□ -1.1
PCNX4-208ENST00000554534 METTL16Q86W50 562 aaKnown RBP8.19□□□□□ -1.1
PCNX4-208ENST00000554534 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.19□□□□□ -1.1
PCNX4-208ENST00000554534 STK11IPQ8N1F8 1099 aa8.19□□□□□ -1.1
PCNX4-208ENST00000554534 SLC44A5Q8NCS7 719 aa8.19□□□□□ -1.1
PCNX4-208ENST00000554534 SOCS4Q8WXH5 440 aa8.19□□□□□ -1.1
PCNX4-208ENST00000554534 MYLIPQ8WY64 445 aa8.19□□□□□ -1.1
PCNX4-208ENST00000554534 DYNLL2Q96FJ2 89 aa8.19□□□□□ -1.1
PCNX4-208ENST00000554534 CDX2Q99626 313 aaPredicted RBP8.19□□□□□ -1.1
PCNX4-208ENST00000554534 APBA2Q99767 749 aa8.19□□□□□ -1.1
PCNX4-208ENST00000554534 DDX20Q9UHI6 824 aaKnown RBP8.19□□□□□ -1.1
PCNX4-208ENST00000554534 HDAC5Q9UQL6 1122 aa8.19□□□□□ -1.1
PCNX4-208ENST00000554534 VCANP13611 3396 aa8.19□□□□□ -1.1
PCNX4-208ENST00000554534 CYP2D7A0A087X1C5 515 aa8.18□□□□□ -1.1
PCNX4-208ENST00000554534 SPDYE16A6NNV3 312 aaPredicted RBP8.18□□□□□ -1.1
PCNX4-208ENST00000554534 PRKAB2O43741 272 aa8.18□□□□□ -1.1
PCNX4-208ENST00000554534 POLR3DP05423 398 aaPredicted RBP8.18□□□□□ -1.1
PCNX4-208ENST00000554534 RLBP1P12271 317 aa8.18□□□□□ -1.1
PCNX4-208ENST00000554534 TAL1P17542 331 aaPredicted RBP8.18□□□□□ -1.1
PCNX4-208ENST00000554534 ITGB8P26012 769 aa8.18□□□□□ -1.1
PCNX4-208ENST00000554534 SLC4A3P48751 1232 aa8.18□□□□□ -1.1
PCNX4-208ENST00000554534 EPHB4P54760 987 aa8.18□□□□□ -1.1
PCNX4-208ENST00000554534 IRX5P78411 483 aaPredicted RBP8.18□□□□□ -1.1
PCNX4-208ENST00000554534 POLA2Q14181 598 aa8.18□□□□□ -1.1
PCNX4-208ENST00000554534 TRIM60Q495X7 471 aa8.18□□□□□ -1.1
PCNX4-208ENST00000554534 TATDN1Q6P1N9 297 aa8.18□□□□□ -1.1
PCNX4-208ENST00000554534 ATF7IPQ6VMQ6 1270 aa8.18□□□□□ -1.1
PCNX4-208ENST00000554534 SLC39A5Q6ZMH5 540 aa8.18□□□□□ -1.1
PCNX4-208ENST00000554534 DPP9Q86TI2 863 aa8.18□□□□□ -1.1
PCNX4-208ENST00000554534 SPICE1Q8N0Z3 855 aa8.18□□□□□ -1.1
PCNX4-208ENST00000554534 SDR42E1Q8WUS8 393 aa8.18□□□□□ -1.1
PCNX4-208ENST00000554534 LENG1Q96BZ8 264 aaPredicted RBP8.18□□□□□ -1.1
PCNX4-208ENST00000554534 CHMP4CQ96CF2 233 aa8.18□□□□□ -1.1
PCNX4-208ENST00000554534 MOV10L1Q9BXT6 1211 aaKnown RBP8.18□□□□□ -1.1
PCNX4-208ENST00000554534 TBC1D2Q9BYX2 928 aa8.18□□□□□ -1.1
PCNX4-208ENST00000554534 SEMA6BQ9H3T3 888 aa8.18□□□□□ -1.1
PCNX4-208ENST00000554534 IL1RAPL2Q9NP60 686 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms