RNA–Protein interactions for RNA: ENST00000551352.1

SMARCD1-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 2

Gene SMARCD1, Length 621 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-210ENST00000551352 DZIP1Q86YF9 867 aaKnown RBP8.78□□□□□ -1
SMARCD1-210ENST00000551352 UPF3BQ9BZI7 483 aaKnown RBP8.78□□□□□ -1
SMARCD1-210ENST00000551352 TM6SF1Q9BZW5 370 aa8.78□□□□□ -1
SMARCD1-210ENST00000551352 CHMP5Q9NZZ3 219 aa8.78□□□□□ -1
SMARCD1-210ENST00000551352 CIZ1Q9ULV3 898 aaPredicted RBP8.78□□□□□ -1
SMARCD1-210ENST00000551352 LAMA4Q16363 1823 aa8.77□□□□□ -1
SMARCD1-210ENST00000551352 TRIM75PA6NK02 468 aa8.77□□□□□ -1.01
SMARCD1-210ENST00000551352 CTNND1O60716 968 aaKnown RBP8.77□□□□□ -1.01
SMARCD1-210ENST00000551352 NPM3O75607 178 aaKnown RBP8.77□□□□□ -1.01
SMARCD1-210ENST00000551352 FMNL1O95466 1100 aaPredicted RBP8.77□□□□□ -1.01
SMARCD1-210ENST00000551352 CYP2E1P05181 493 aaPredicted RBP8.77□□□□□ -1.01
SMARCD1-210ENST00000551352 ZKSCAN1P17029 563 aaPredicted RBP8.77□□□□□ -1.01
SMARCD1-210ENST00000551352 GJA8P48165 433 aa8.77□□□□□ -1.01
SMARCD1-210ENST00000551352 NBR1Q14596 966 aa8.77□□□□□ -1.01
SMARCD1-210ENST00000551352 TTF1Q15361 905 aaPredicted RBP8.77□□□□□ -1.01
SMARCD1-210ENST00000551352 SLFNL1Q499Z3 407 aa8.77□□□□□ -1.01
SMARCD1-210ENST00000551352 RNF20Q5VTR2 975 aa8.77□□□□□ -1.01
SMARCD1-210ENST00000551352 NBPF11Q86T75 865 aa8.77□□□□□ -1.01
SMARCD1-210ENST00000551352 SPATA5Q8NB90 893 aa8.77□□□□□ -1.01
SMARCD1-210ENST00000551352 SH3RF3Q8TEJ3 882 aaPredicted RBP8.77□□□□□ -1.01
SMARCD1-210ENST00000551352 APPBP2Q92624 585 aa8.77□□□□□ -1.01
SMARCD1-210ENST00000551352 TTC14Q96N46 770 aa8.77□□□□□ -1.01
SMARCD1-210ENST00000551352 PARK7Q99497 189 aaKnown RBP8.77□□□□□ -1.01
SMARCD1-210ENST00000551352 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.77□□□□□ -1.01
SMARCD1-210ENST00000551352 OSBPL5Q9H0X9 879 aaPredicted RBP8.77□□□□□ -1.01
SMARCD1-210ENST00000551352 PIH1D3Q9NQM4 214 aaKnown RBP8.77□□□□□ -1.01
SMARCD1-210ENST00000551352 U3KPZ7 1027 aaPredicted RBP8.77□□□□□ -1.01
SMARCD1-210ENST00000551352 COL6A3P12111 3177 aa8.76□□□□□ -1.01
SMARCD1-210ENST00000551352 M0R2C6 588 aa8.76□□□□□ -1.01
SMARCD1-210ENST00000551352 TBC1D12O60347 775 aa8.76□□□□□ -1.01
SMARCD1-210ENST00000551352 GJB1P08034 283 aa8.76□□□□□ -1.01
SMARCD1-210ENST00000551352 CASTP20810 708 aaKnown RBP8.76□□□□□ -1.01
SMARCD1-210ENST00000551352 ADD2P35612 726 aa8.76□□□□□ -1.01
SMARCD1-210ENST00000551352 FLT3LGP49771 235 aa8.76□□□□□ -1.01
SMARCD1-210ENST00000551352 MNX1P50219 401 aaPredicted RBP8.76□□□□□ -1.01
SMARCD1-210ENST00000551352 TRIM32Q13049 653 aa8.76□□□□□ -1.01
SMARCD1-210ENST00000551352 ARHGEF6Q15052 776 aa8.76□□□□□ -1.01
SMARCD1-210ENST00000551352 NFKBIBQ15653 356 aa8.76□□□□□ -1.01
SMARCD1-210ENST00000551352 ADCK5Q3MIX3 580 aa8.76□□□□□ -1.01
SMARCD1-210ENST00000551352 TSGA10IPQ3SY00 556 aa8.76□□□□□ -1.01
SMARCD1-210ENST00000551352 ZSCAN25Q6NSZ9 544 aa8.76□□□□□ -1.01
SMARCD1-210ENST00000551352 ZSCAN29Q8IWY8 852 aaPredicted RBP8.76□□□□□ -1.01
SMARCD1-210ENST00000551352 ZGPATQ8N5A5 531 aaKnown RBP8.76□□□□□ -1.01
SMARCD1-210ENST00000551352 RAET1EQ8TD07 263 aa8.76□□□□□ -1.01
SMARCD1-210ENST00000551352 OSBP2Q969R2 916 aa8.76□□□□□ -1.01
SMARCD1-210ENST00000551352 TMX3Q96JJ7 454 aa8.76□□□□□ -1.01
SMARCD1-210ENST00000551352 JAKMIP1Q96N16 626 aaKnown RBP8.76□□□□□ -1.01
SMARCD1-210ENST00000551352 DSCC1Q9BVC3 393 aa8.76□□□□□ -1.01
SMARCD1-210ENST00000551352 ZSWIM6Q9HCJ5 1215 aa8.76□□□□□ -1.01
SMARCD1-210ENST00000551352 FOXD4L1Q9NU39 408 aa8.76□□□□□ -1.01
SMARCD1-210ENST00000551352 AGTPBP1Q9UPW5 1226 aa8.76□□□□□ -1.01
SMARCD1-210ENST00000551352 SLC45A1Q9Y2W3 748 aa8.76□□□□□ -1.01
SMARCD1-210ENST00000551352 LAMA3Q16787 3333 aa8.76□□□□□ -1.01
SMARCD1-210ENST00000551352 LTBP2Q14767 1821 aa8.75□□□□□ -1.01
SMARCD1-210ENST00000551352 ADCY3O60266 1144 aa8.75□□□□□ -1.01
SMARCD1-210ENST00000551352 INHAP05111 366 aa8.75□□□□□ -1.01
SMARCD1-210ENST00000551352 PSMA5P28066 241 aa8.75□□□□□ -1.01
SMARCD1-210ENST00000551352 CAP2P40123 477 aa8.75□□□□□ -1.01
SMARCD1-210ENST00000551352 HMGCS2P54868 508 aa8.75□□□□□ -1.01
SMARCD1-210ENST00000551352 FCGRTP55899 365 aa8.75□□□□□ -1.01
SMARCD1-210ENST00000551352 DYNLL1P63167 89 aaKnown RBP8.75□□□□□ -1.01
SMARCD1-210ENST00000551352 EVX2Q03828 476 aa8.75□□□□□ -1.01
SMARCD1-210ENST00000551352 SPP2Q13103 211 aa8.75□□□□□ -1.01
SMARCD1-210ENST00000551352 CUL4AQ13619 759 aa8.75□□□□□ -1.01
SMARCD1-210ENST00000551352 UBE3CQ15386 1083 aa8.75□□□□□ -1.01
SMARCD1-210ENST00000551352 VPS53Q5VIR6 699 aa8.75□□□□□ -1.01
SMARCD1-210ENST00000551352 SPTY2D1Q68D10 685 aaPredicted RBP8.75□□□□□ -1.01
SMARCD1-210ENST00000551352 CHRDL2Q6WN34 429 aa8.75□□□□□ -1.01
SMARCD1-210ENST00000551352 METTL16Q86W50 562 aaKnown RBP8.75□□□□□ -1.01
SMARCD1-210ENST00000551352 ANKRD13CQ8N6S4 541 aa8.75□□□□□ -1.01
SMARCD1-210ENST00000551352 DIS3LQ8TF46 1054 aaKnown RBP8.75□□□□□ -1.01
SMARCD1-210ENST00000551352 U2AF1L4Q8WU68 220 aaKnown RBP8.75□□□□□ -1.01
SMARCD1-210ENST00000551352 RNF208Q9H0X6 261 aa8.75□□□□□ -1.01
SMARCD1-210ENST00000551352 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.75□□□□□ -1.01
SMARCD1-210ENST00000551352 PAK6Q9NQU5 681 aaPredicted RBP8.75□□□□□ -1.01
SMARCD1-210ENST00000551352 PICK1Q9NRD5 415 aa8.75□□□□□ -1.01
SMARCD1-210ENST00000551352 RBM27Q9P2N5 1060 aaKnown RBP8.75□□□□□ -1.01
SMARCD1-210ENST00000551352 GJD2Q9UKL4 321 aa8.75□□□□□ -1.01
SMARCD1-210ENST00000551352 CYP46A1Q9Y6A2 500 aa8.75□□□□□ -1.01
SMARCD1-210ENST00000551352 PLXNA1Q9UIW2 1896 aa8.74□□□□□ -1.01
SMARCD1-210ENST00000551352 LAMA2P24043 3122 aaKnown RBP8.74□□□□□ -1.01
SMARCD1-210ENST00000551352 GREB1LQ9C091 1923 aaPredicted RBP8.74□□□□□ -1.01
SMARCD1-210ENST00000551352 IDH1O75874 414 aaKnown RBP8.74□□□□□ -1.01
SMARCD1-210ENST00000551352 HSPD1P10809 573 aaKnown RBP8.74□□□□□ -1.01
SMARCD1-210ENST00000551352 CPA1P15085 419 aa8.74□□□□□ -1.01
SMARCD1-210ENST00000551352 PDE6AP16499 860 aa8.74□□□□□ -1.01
SMARCD1-210ENST00000551352 AK2P54819 239 aa8.74□□□□□ -1.01
SMARCD1-210ENST00000551352 IRF5Q13568 498 aa8.74□□□□□ -1.01
SMARCD1-210ENST00000551352 KRT32Q14532 448 aa8.74□□□□□ -1.01
SMARCD1-210ENST00000551352 SH3D19Q5HYK7 790 aa8.74□□□□□ -1.01
SMARCD1-210ENST00000551352 SLC9C2Q5TAH2 1124 aa8.74□□□□□ -1.01
SMARCD1-210ENST00000551352 NOL8Q76FK4 1167 aaKnown RBP8.74□□□□□ -1.01
SMARCD1-210ENST00000551352 RUFY3Q7L099 469 aa8.74□□□□□ -1.01
SMARCD1-210ENST00000551352 FASTKD5Q7L8L6 764 aaKnown RBP8.74□□□□□ -1.01
SMARCD1-210ENST00000551352 TEX11Q8IYF3 940 aa8.74□□□□□ -1.01
SMARCD1-210ENST00000551352 SLAIN1Q8ND83 568 aa8.74□□□□□ -1.01
SMARCD1-210ENST00000551352 ASCC2Q9H1I8 757 aaPredicted RBP8.74□□□□□ -1.01
SMARCD1-210ENST00000551352 TXNRD2Q9NNW7 524 aa8.74□□□□□ -1.01
SMARCD1-210ENST00000551352 PDRG1Q9NUG6 133 aa8.74□□□□□ -1.01
SMARCD1-210ENST00000551352 AATFQ9NY61 560 aaKnown RBP eCLIP8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms