RNA–Protein interactions for RNA: ENST00000550929.5

LETMD1-228, Transcript of LETM1 domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LETMD1, Length 1,389 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-228ENST00000550929 DNAJC2Q99543 621 aaKnown RBP11.01□□□□□ -0.65
LETMD1-228ENST00000550929 TBC1D2Q9BYX2 928 aa11.01□□□□□ -0.65
LETMD1-228ENST00000550929 ZBTB21Q9ULJ3 1066 aa11.01□□□□□ -0.65
LETMD1-228ENST00000550929 PHIPQ8WWQ0 1821 aa11.01□□□□□ -0.65
LETMD1-228ENST00000550929 KIAA0100Q14667 2235 aaKnown RBP11□□□□□ -0.65
LETMD1-228ENST00000550929 USP17L10C9JJH3 530 aa11□□□□□ -0.65
LETMD1-228ENST00000550929 GOLIM4O00461 696 aa11□□□□□ -0.65
LETMD1-228ENST00000550929 TFRCP02786 760 aaKnown RBP11□□□□□ -0.65
LETMD1-228ENST00000550929 GCLCP48506 637 aaPredicted RBP11□□□□□ -0.65
LETMD1-228ENST00000550929 TRIM32Q13049 653 aa11□□□□□ -0.65
LETMD1-228ENST00000550929 SLFNL1Q499Z3 407 aa11□□□□□ -0.65
LETMD1-228ENST00000550929 HSP90AB4PQ58FF6 505 aa11□□□□□ -0.65
LETMD1-228ENST00000550929 CLASRPQ8N2M8 674 aaKnown RBP11□□□□□ -0.65
LETMD1-228ENST00000550929 NKX2-3Q8TAU0 364 aa11□□□□□ -0.65
LETMD1-228ENST00000550929 DEFB118Q96PH6 123 aa11□□□□□ -0.65
LETMD1-228ENST00000550929 TXNRD2Q9NNW7 524 aa11□□□□□ -0.65
LETMD1-228ENST00000550929 EMILIN3Q9NT22 766 aa11□□□□□ -0.65
LETMD1-228ENST00000550929 RBBP6Q7Z6E9 1792 aaKnown RBP11□□□□□ -0.65
LETMD1-228ENST00000550929 MAGEB6P1A0A0J9YX57 407 aa10.99□□□□□ -0.65
LETMD1-228ENST00000550929 C19orf81C9J6K1 198 aa10.99□□□□□ -0.65
LETMD1-228ENST00000550929 SGPL1O95470 568 aa10.99□□□□□ -0.65
LETMD1-228ENST00000550929 POLR3DP05423 398 aaPredicted RBP10.99□□□□□ -0.65
LETMD1-228ENST00000550929 IFIT2P09913 472 aaKnown RBP10.99□□□□□ -0.65
LETMD1-228ENST00000550929 MS4A1P11836 297 aa10.99□□□□□ -0.65
LETMD1-228ENST00000550929 CYP2B6P20813 491 aa10.99□□□□□ -0.65
LETMD1-228ENST00000550929 PLCD1P51178 756 aa10.99□□□□□ -0.65
LETMD1-228ENST00000550929 IRF5Q13568 498 aa10.99□□□□□ -0.65
LETMD1-228ENST00000550929 RAB3GAP1Q15042 981 aa10.99□□□□□ -0.65
LETMD1-228ENST00000550929 Q3C1V9 767 aa10.99□□□□□ -0.65
LETMD1-228ENST00000550929 SLC9C2Q5TAH2 1124 aa10.99□□□□□ -0.65
LETMD1-228ENST00000550929 RPAP2Q8IXW5 612 aaPredicted RBP10.99□□□□□ -0.65
LETMD1-228ENST00000550929 PXYLP1Q8TE99 480 aa10.99□□□□□ -0.65
LETMD1-228ENST00000550929 KIF1BPQ96EK5 621 aa10.99□□□□□ -0.65
LETMD1-228ENST00000550929 RIOK1Q9BRS2 568 aaKnown RBP10.99□□□□□ -0.65
LETMD1-228ENST00000550929 PAGR1Q9BTK6 254 aa10.99□□□□□ -0.65
LETMD1-228ENST00000550929 ZBTB40Q9NUA8 1239 aa10.99□□□□□ -0.65
LETMD1-228ENST00000550929 GJD2Q9UKL4 321 aa10.99□□□□□ -0.65
LETMD1-228ENST00000550929 SIPA1L1O43166 1804 aa10.99□□□□□ -0.65
LETMD1-228ENST00000550929 MYO5AQ9Y4I1 1855 aaKnown RBP10.98□□□□□ -0.65
LETMD1-228ENST00000550929 RIOK3O14730 519 aaKnown RBP10.98□□□□□ -0.65
LETMD1-228ENST00000550929 FARP2O94887 1054 aaPredicted RBP10.98□□□□□ -0.65
LETMD1-228ENST00000550929 PDE6AP16499 860 aa10.98□□□□□ -0.65
LETMD1-228ENST00000550929 HOXA7P31268 230 aaPredicted RBP10.98□□□□□ -0.65
LETMD1-228ENST00000550929 HERVK_113P62684 666 aa10.98□□□□□ -0.65
LETMD1-228ENST00000550929 CERKLQ49MI3 558 aaPredicted RBP10.98□□□□□ -0.65
LETMD1-228ENST00000550929 C20orf194Q5TEA3 1177 aa10.98□□□□□ -0.65
LETMD1-228ENST00000550929 USP17L2Q6R6M4 530 aa10.98□□□□□ -0.65
LETMD1-228ENST00000550929 TTC6Q86TZ1 520 aa10.98□□□□□ -0.65
LETMD1-228ENST00000550929 EFCAB3Q8N7B9 438 aa10.98□□□□□ -0.65
LETMD1-228ENST00000550929 ACER1Q8TDN7 264 aa10.98□□□□□ -0.65
LETMD1-228ENST00000550929 FEZ1Q99689 392 aa10.98□□□□□ -0.65
LETMD1-228ENST00000550929 BOLA2Q9H3K6 86 aa10.98□□□□□ -0.65
LETMD1-228ENST00000550929 RBPJLQ9UBG7 517 aa10.98□□□□□ -0.65
LETMD1-228ENST00000550929 MORF4L1Q9UBU8 362 aa10.98□□□□□ -0.65
LETMD1-228ENST00000550929 SERPINB13Q9UIV8 391 aa10.98□□□□□ -0.65
LETMD1-228ENST00000550929 RCAN3Q9UKA8 241 aa10.98□□□□□ -0.65
LETMD1-228ENST00000550929 DDX19BQ9UMR2 479 aa10.98□□□□□ -0.65
LETMD1-228ENST00000550929 BOLA1Q9Y3E2 137 aa10.98□□□□□ -0.65
LETMD1-228ENST00000550929 MAST2Q6P0Q8 1798 aa10.98□□□□□ -0.65
LETMD1-228ENST00000550929 PTPRFP10586 1907 aa10.98□□□□□ -0.65
LETMD1-228ENST00000550929 ZNF532Q9HCE3 1301 aa10.98□□□□□ -0.65
LETMD1-228ENST00000550929 SMARCA5O60264 1052 aaPredicted RBP10.97□□□□□ -0.65
LETMD1-228ENST00000550929 IGSF3O75054 1194 aa10.97□□□□□ -0.65
LETMD1-228ENST00000550929 HMMRO75330 724 aa10.97□□□□□ -0.65
LETMD1-228ENST00000550929 CHGBP05060 677 aa10.97□□□□□ -0.65
LETMD1-228ENST00000550929 CYP2D6P10635 497 aa10.97□□□□□ -0.65
LETMD1-228ENST00000550929 TTF1Q15361 905 aaPredicted RBP10.97□□□□□ -0.65
LETMD1-228ENST00000550929 ABCB5Q2M3G0 1257 aa10.97□□□□□ -0.65
LETMD1-228ENST00000550929 TATDN1Q6P1N9 297 aa10.97□□□□□ -0.65
LETMD1-228ENST00000550929 POTEEQ6S8J3 1075 aa10.97□□□□□ -0.65
LETMD1-228ENST00000550929 UBE2Q1Q7Z7E8 422 aa10.97□□□□□ -0.65
LETMD1-228ENST00000550929 LCORLQ8N3X6 602 aa10.97□□□□□ -0.65
LETMD1-228ENST00000550929 GPRC5AQ8NFJ5 357 aa10.97□□□□□ -0.65
LETMD1-228ENST00000550929 SDR42E1Q8WUS8 393 aa10.97□□□□□ -0.65
LETMD1-228ENST00000550929 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.97□□□□□ -0.65
LETMD1-228ENST00000550929 MCM9Q9NXL9 1143 aa10.97□□□□□ -0.65
LETMD1-228ENST00000550929 ATAD5Q96QE3 1844 aa10.96□□□□□ -0.65
LETMD1-228ENST00000550929 MPHOSPH10O00566 681 aaKnown RBP10.96□□□□□ -0.65
LETMD1-228ENST00000550929 PRKAB2O43741 272 aa10.96□□□□□ -0.65
LETMD1-228ENST00000550929 SHMT1P34896 483 aa10.96□□□□□ -0.65
LETMD1-228ENST00000550929 CCAR1Q8IX12 1150 aaKnown RBP10.96□□□□□ -0.65
LETMD1-228ENST00000550929 DIS3LQ8TF46 1054 aaKnown RBP10.96□□□□□ -0.65
LETMD1-228ENST00000550929 HTATIP2Q9BUP3 242 aa10.96□□□□□ -0.65
LETMD1-228ENST00000550929 CRNKL1Q9BZJ0 848 aaKnown RBP10.96□□□□□ -0.65
LETMD1-228ENST00000550929 PORCNQ9H237 461 aa10.96□□□□□ -0.65
LETMD1-228ENST00000550929 ARMT1Q9H993 441 aa10.96□□□□□ -0.65
LETMD1-228ENST00000550929 CABP5Q9NP86 173 aa10.96□□□□□ -0.65
LETMD1-228ENST00000550929 GINM1Q9NU53 330 aa10.96□□□□□ -0.65
LETMD1-228ENST00000550929 MGAMO43451 1857 aa10.96□□□□□ -0.66
LETMD1-228ENST00000550929 TCRBV5S4A2TA0A5A2 114 aa10.95□□□□□ -0.66
LETMD1-228ENST00000550929 SMIM22K7EJ46 135 aa10.95□□□□□ -0.66
LETMD1-228ENST00000550929 RAB11FIP3O75154 756 aa10.95□□□□□ -0.66
LETMD1-228ENST00000550929 HMGCRP04035 888 aa10.95□□□□□ -0.66
LETMD1-228ENST00000550929 GUCY1A2P33402 732 aa10.95□□□□□ -0.66
LETMD1-228ENST00000550929 ERVK-9P63128 1117 aa10.95□□□□□ -0.66
LETMD1-228ENST00000550929 ERVK-24P63145 666 aa10.95□□□□□ -0.66
LETMD1-228ENST00000550929 SEPT2Q15019 361 aa10.95□□□□□ -0.66
LETMD1-228ENST00000550929 WDR78Q5VTH9 848 aa10.95□□□□□ -0.66
LETMD1-228ENST00000550929 CERS3Q8IU89 383 aa10.95□□□□□ -0.66
LETMD1-228ENST00000550929 SLC44A5Q8NCS7 719 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms