RNA–Protein interactions for RNA: ENST00000533229.1

CACNA1E-208, Transcript of calcium voltage-gated channel subunit alpha1 E, humanhuman

TSL 1 (best)

Gene CACNA1E, Length 2,142 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1E-208ENST00000533229 CALM1P0DP23 149 aa17.57■□□□□ 0.4
CACNA1E-208ENST00000533229 CALM2P0DP24 149 aa17.57■□□□□ 0.4
CACNA1E-208ENST00000533229 CALM3P0DP25 149 aa17.57■□□□□ 0.4
CACNA1E-208ENST00000533229 GRIK5Q16478 980 aa17.57■□□□□ 0.4
CACNA1E-208ENST00000533229 ZNF827Q17R98 1081 aa17.57■□□□□ 0.4
CACNA1E-208ENST00000533229 SBK1Q52WX2 424 aa17.57■□□□□ 0.4
CACNA1E-208ENST00000533229 NT5DC1Q5TFE4 455 aa17.57■□□□□ 0.4
CACNA1E-208ENST00000533229 RCSD1Q6JBY9 416 aa17.57■□□□□ 0.4
CACNA1E-208ENST00000533229 TNFRSF25Q93038 417 aa17.57■□□□□ 0.4
CACNA1E-208ENST00000533229 USP21Q9UK80 565 aa17.57■□□□□ 0.4
CACNA1E-208ENST00000533229 CEP131Q9UPN4 1083 aa17.57■□□□□ 0.4
CACNA1E-208ENST00000533229 TRIM75PA6NK02 468 aa17.57■□□□□ 0.4
CACNA1E-208ENST00000533229 ADAMTS3O15072 1205 aa17.57■□□□□ 0.4
CACNA1E-208ENST00000533229 PTPN21Q16825 1174 aa17.57■□□□□ 0.4
CACNA1E-208ENST00000533229 OLFM4Q6UX06 510 aa17.57■□□□□ 0.4
CACNA1E-208ENST00000533229 NYAP1Q6ZVC0 841 aa17.57■□□□□ 0.4
CACNA1E-208ENST00000533229 CCAR2Q8N163 923 aaKnown RBP17.57■□□□□ 0.4
CACNA1E-208ENST00000533229 EPSTI1Q96J88 318 aa17.57■□□□□ 0.4
CACNA1E-208ENST00000533229 MCM9Q9NXL9 1143 aa17.57■□□□□ 0.4
CACNA1E-208ENST00000533229 ARPP21Q9UBL0 812 aaPredicted RBP17.57■□□□□ 0.4
CACNA1E-208ENST00000533229 MKRN1Q9UHC7 482 aaKnown RBP17.57■□□□□ 0.4
CACNA1E-208ENST00000533229 MYH2Q9UKX2 1941 aa17.57■□□□□ 0.4
CACNA1E-208ENST00000533229 NPHP1O15259 732 aa17.56■□□□□ 0.4
CACNA1E-208ENST00000533229 CTIFO43310 598 aaKnown RBP17.56■□□□□ 0.4
CACNA1E-208ENST00000533229 UBASH3AP57075 661 aa17.56■□□□□ 0.4
CACNA1E-208ENST00000533229 GPR101Q96P66 508 aaPredicted RBP17.56■□□□□ 0.4
CACNA1E-208ENST00000533229 ANKIB1Q9P2G1 1089 aa17.56■□□□□ 0.4
CACNA1E-208ENST00000533229 COL24A1Q17RW2 1714 aa17.56■□□□□ 0.4
CACNA1E-208ENST00000533229 RFC4P35249 363 aa17.56■□□□□ 0.4
CACNA1E-208ENST00000533229 FMR1Q06787 632 aaKnown RBP eCLIP17.56■□□□□ 0.4
CACNA1E-208ENST00000533229 HSP90AA4PQ58FG1 418 aa17.56■□□□□ 0.4
CACNA1E-208ENST00000533229 DZIP1Q86YF9 867 aaKnown RBP17.56■□□□□ 0.4
CACNA1E-208ENST00000533229 MED15Q96RN5 788 aa17.56■□□□□ 0.4
CACNA1E-208ENST00000533229 TSPY2A6NKD2 308 aa17.55■□□□□ 0.4
CACNA1E-208ENST00000533229 UBAP1LF5GYI3 381 aa17.55■□□□□ 0.4
CACNA1E-208ENST00000533229 SERPINC1P01008 464 aa17.55■□□□□ 0.4
CACNA1E-208ENST00000533229 MORC3Q14149 939 aa17.55■□□□□ 0.4
CACNA1E-208ENST00000533229 DIXDC1Q155Q3 683 aa17.55■□□□□ 0.4
CACNA1E-208ENST00000533229 TRAPPC3LQ5T215 181 aa17.55■□□□□ 0.4
CACNA1E-208ENST00000533229 CEP135Q66GS9 1140 aa17.55■□□□□ 0.4
CACNA1E-208ENST00000533229 E4F1Q66K89 784 aaPredicted RBP17.55■□□□□ 0.4
CACNA1E-208ENST00000533229 CTCFLQ8NI51 663 aaPredicted RBP17.55■□□□□ 0.4
CACNA1E-208ENST00000533229 MAP7D2Q96T17 732 aa17.55■□□□□ 0.4
CACNA1E-208ENST00000533229 ARID3AQ99856 593 aa17.55■□□□□ 0.4
CACNA1E-208ENST00000533229 IL17RBQ9NRM6 502 aa17.55■□□□□ 0.4
CACNA1E-208ENST00000533229 TMEM232C9JQI7 657 aa17.54■□□□□ 0.4
CACNA1E-208ENST00000533229 GRAPQ13588 217 aa17.54■□□□□ 0.4
CACNA1E-208ENST00000533229 ZNF174Q15697 407 aa17.54■□□□□ 0.4
CACNA1E-208ENST00000533229 FAM196AQ6ZSG2 479 aa17.54■□□□□ 0.4
CACNA1E-208ENST00000533229 SPATA20Q8TB22 786 aa17.54■□□□□ 0.4
CACNA1E-208ENST00000533229 GRAPLQ8TC17 118 aaPredicted RBP17.54■□□□□ 0.4
CACNA1E-208ENST00000533229 ZNF592Q92610 1267 aa17.54■□□□□ 0.4
CACNA1E-208ENST00000533229 DYNLL2Q96FJ2 89 aa17.54■□□□□ 0.4
CACNA1E-208ENST00000533229 KCND1Q9NSA2 647 aa17.54■□□□□ 0.4
CACNA1E-208ENST00000533229 INTS13Q9NVM9 706 aa17.54■□□□□ 0.4
CACNA1E-208ENST00000533229 HOOK1Q9UJC3 728 aaKnown RBP17.54■□□□□ 0.4
CACNA1E-208ENST00000533229 BTAF1O14981 1849 aa17.54■□□□□ 0.4
CACNA1E-208ENST00000533229 SFPQP23246 707 aaKnown RBP eCLIP17.54■□□□□ 0.4
CACNA1E-208ENST00000533229 PTPN14Q15678 1187 aa17.54■□□□□ 0.4
CACNA1E-208ENST00000533229 CFAP100Q494V2 611 aa17.54■□□□□ 0.4
CACNA1E-208ENST00000533229 C12orf60Q5U649 245 aa17.54■□□□□ 0.4
CACNA1E-208ENST00000533229 CCDC150Q8NCX0 1101 aa17.54■□□□□ 0.4
CACNA1E-208ENST00000533229 SH3RF3Q8TEJ3 882 aaPredicted RBP17.54■□□□□ 0.4
CACNA1E-208ENST00000533229 SMARCE1Q969G3 411 aa17.54■□□□□ 0.4
CACNA1E-208ENST00000533229 MORC2Q9Y6X9 1032 aaPredicted RBP17.54■□□□□ 0.4
CACNA1E-208ENST00000533229 TNRC6CQ9HCJ0 1690 aaKnown RBP17.54■□□□□ 0.4
CACNA1E-208ENST00000533229 TFAP4Q01664 338 aa17.53■□□□□ 0.4
CACNA1E-208ENST00000533229 DHX58Q96C10 678 aa17.53■□□□□ 0.4
CACNA1E-208ENST00000533229 LRRC4BQ9NT99 713 aa17.53■□□□□ 0.4
CACNA1E-208ENST00000533229 PAXBP1Q9Y5B6 917 aa17.53■□□□□ 0.4
CACNA1E-208ENST00000533229 LDHBP07195 334 aaKnown RBP17.53■□□□□ 0.4
CACNA1E-208ENST00000533229 SCG2P13521 617 aa17.53■□□□□ 0.4
CACNA1E-208ENST00000533229 CASP1P29466 404 aa17.53■□□□□ 0.4
CACNA1E-208ENST00000533229 SPTY2D1Q68D10 685 aaPredicted RBP17.53■□□□□ 0.4
CACNA1E-208ENST00000533229 TRMT44Q8IYL2 757 aaKnown RBP17.53■□□□□ 0.4
CACNA1E-208ENST00000533229 SYMPKQ92797 1274 aaKnown RBP17.53■□□□□ 0.4
CACNA1E-208ENST00000533229 ZBTB22O15209 634 aa17.52■□□□□ 0.4
CACNA1E-208ENST00000533229 PFKFB3Q16875 520 aaPredicted RBP17.52■□□□□ 0.4
CACNA1E-208ENST00000533229 LEMD3Q9Y2U8 911 aa17.52■□□□□ 0.4
CACNA1E-208ENST00000533229 USP5P45974 858 aa17.51■□□□□ 0.39
CACNA1E-208ENST00000533229 GOLGA8FQ08AF8 430 aa17.51■□□□□ 0.39
CACNA1E-208ENST00000533229 GOLGA8DPQ0D2H9 430 aa17.51■□□□□ 0.39
CACNA1E-208ENST00000533229 PTGDRQ13258 359 aa17.51■□□□□ 0.39
CACNA1E-208ENST00000533229 TTC38Q5R3I4 469 aa17.51■□□□□ 0.39
CACNA1E-208ENST00000533229 PIK3AP1Q6ZUJ8 805 aa17.51■□□□□ 0.39
CACNA1E-208ENST00000533229 MTERF4Q7Z6M4 381 aaKnown RBP17.51■□□□□ 0.39
CACNA1E-208ENST00000533229 VSTM4Q8IW00 320 aa17.51■□□□□ 0.39
CACNA1E-208ENST00000533229 STAG2Q8N3U4 1231 aa17.51■□□□□ 0.39
CACNA1E-208ENST00000533229 CNBD1Q8NA66 436 aa17.51■□□□□ 0.39
CACNA1E-208ENST00000533229 MLKLQ8NB16 471 aa17.51■□□□□ 0.39
CACNA1E-208ENST00000533229 WDR66Q8TBY9 1149 aa17.51■□□□□ 0.39
CACNA1E-208ENST00000533229 BRMS1Q9HCU9 246 aa17.51■□□□□ 0.39
CACNA1E-208ENST00000533229 NFE2L3Q9Y4A8 694 aa17.51■□□□□ 0.39
CACNA1E-208ENST00000533229 MYH13Q9UKX3 1938 aa17.51■□□□□ 0.39
CACNA1E-208ENST00000533229 ZNF18P17022 549 aa17.51■□□□□ 0.39
CACNA1E-208ENST00000533229 AFMP43652 599 aa17.51■□□□□ 0.39
CACNA1E-208ENST00000533229 NAA30Q147X3 362 aaPredicted RBP17.51■□□□□ 0.39
CACNA1E-208ENST00000533229 KANK3Q6NY19 840 aa17.51■□□□□ 0.39
CACNA1E-208ENST00000533229 SH3RF1Q7Z6J0 888 aa17.51■□□□□ 0.39
CACNA1E-208ENST00000533229 EP400Q96L91 3159 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms