RNA–Protein interactions for RNA: ENST00000530402.1

VPS26B-205, Transcript of VPS26, retromer complex component B, humanhuman

TSL 3

Gene VPS26B, Length 740 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26B-205ENST00000530402 TAB3Q8N5C8 712 aaPredicted RBP9.11□□□□□ -0.95
VPS26B-205ENST00000530402 C19orf47Q8N9M1 422 aaKnown RBP9.11□□□□□ -0.95
VPS26B-205ENST00000530402 MFSD14AQ96MC6 490 aa9.11□□□□□ -0.95
VPS26B-205ENST00000530402 TPX2Q9ULW0 747 aaKnown RBP9.11□□□□□ -0.95
VPS26B-205ENST00000530402 SLC12A7Q9Y666 1083 aa9.11□□□□□ -0.95
VPS26B-205ENST00000530402 A0A1W2PQH9 124 aa9.1□□□□□ -0.95
VPS26B-205ENST00000530402 FAM87AP0C7U9 286 aa9.1□□□□□ -0.95
VPS26B-205ENST00000530402 ACRP10323 421 aa9.1□□□□□ -0.95
VPS26B-205ENST00000530402 CASP7P55210 303 aa9.1□□□□□ -0.95
VPS26B-205ENST00000530402 UNC5AQ6ZN44 842 aa9.1□□□□□ -0.95
VPS26B-205ENST00000530402 CDH24Q86UP0 819 aa9.1□□□□□ -0.95
VPS26B-205ENST00000530402 PSMG3-AS1Q96PY0 264 aa9.1□□□□□ -0.95
VPS26B-205ENST00000530402 TNKS2Q9H2K2 1166 aa9.1□□□□□ -0.95
VPS26B-205ENST00000530402 SLITRK5O94991 958 aa9.09□□□□□ -0.95
VPS26B-205ENST00000530402 CCNFP41002 786 aa9.09□□□□□ -0.95
VPS26B-205ENST00000530402 ZYXQ15942 572 aaKnown RBP9.09□□□□□ -0.95
VPS26B-205ENST00000530402 DHRS1Q96LJ7 313 aa9.09□□□□□ -0.95
VPS26B-205ENST00000530402 SPOCK3Q9BQ16 436 aa9.09□□□□□ -0.95
VPS26B-205ENST00000530402 DUSP23Q9BVJ7 150 aa9.09□□□□□ -0.95
VPS26B-205ENST00000530402 CEP131Q9UPN4 1083 aa9.09□□□□□ -0.95
VPS26B-205ENST00000530402 CLEC3AO75596 197 aa9.08□□□□□ -0.96
VPS26B-205ENST00000530402 LEFTY1O75610 366 aa9.08□□□□□ -0.96
VPS26B-205ENST00000530402 ETV3P41162 512 aa9.08□□□□□ -0.96
VPS26B-205ENST00000530402 RNF43Q68DV7 783 aa9.08□□□□□ -0.96
VPS26B-205ENST00000530402 ZNF746Q6NUN9 644 aaPredicted RBP9.08□□□□□ -0.96
VPS26B-205ENST00000530402 ZAR1Q86SH2 424 aa9.08□□□□□ -0.96
VPS26B-205ENST00000530402 RIN3Q8TB24 985 aa9.08□□□□□ -0.96
VPS26B-205ENST00000530402 SLC6A18Q96N87 628 aa9.08□□□□□ -0.96
VPS26B-205ENST00000530402 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.08□□□□□ -0.96
VPS26B-205ENST00000530402 KLF4O43474 513 aa9.07□□□□□ -0.96
VPS26B-205ENST00000530402 UBOX5O94941 541 aa9.07□□□□□ -0.96
VPS26B-205ENST00000530402 CYP7A1P22680 504 aa9.07□□□□□ -0.96
VPS26B-205ENST00000530402 ADMP35318 185 aa9.07□□□□□ -0.96
VPS26B-205ENST00000530402 CYP27A1Q02318 531 aa9.07□□□□□ -0.96
VPS26B-205ENST00000530402 NFIAQ12857 509 aa9.07□□□□□ -0.96
VPS26B-205ENST00000530402 RAB33AQ14088 237 aa9.07□□□□□ -0.96
VPS26B-205ENST00000530402 FXNQ16595 210 aa9.07□□□□□ -0.96
VPS26B-205ENST00000530402 CYP27C1Q4G0S4 372 aa9.07□□□□□ -0.96
VPS26B-205ENST00000530402 NBPF6Q5VWK0 638 aa9.07□□□□□ -0.96
VPS26B-205ENST00000530402 OGFOD3Q6PK18 319 aa9.07□□□□□ -0.96
VPS26B-205ENST00000530402 NBPF4Q96M43 638 aa9.07□□□□□ -0.96
VPS26B-205ENST00000530402 ST7Q9NRC1 585 aa9.07□□□□□ -0.96
VPS26B-205ENST00000530402 GSC2O15499 205 aa9.06□□□□□ -0.96
VPS26B-205ENST00000530402 DDAH1O94760 285 aa9.06□□□□□ -0.96
VPS26B-205ENST00000530402 PROCP04070 461 aa9.06□□□□□ -0.96
VPS26B-205ENST00000530402 H2AFB1P0C5Y9 115 aa9.06□□□□□ -0.96
VPS26B-205ENST00000530402 H2AFB2P0C5Z0 115 aa9.06□□□□□ -0.96
VPS26B-205ENST00000530402 DUSP27Q5VZP5 1158 aa9.06□□□□□ -0.96
VPS26B-205ENST00000530402 DBNDD2Q9BQY9 259 aa9.06□□□□□ -0.96
VPS26B-205ENST00000530402 PHAXQ9H814 394 aaKnown RBP9.06□□□□□ -0.96
VPS26B-205ENST00000530402 ATG3Q9NT62 314 aa9.06□□□□□ -0.96
VPS26B-205ENST00000530402 FAM86C1Q9NVL1 165 aa9.06□□□□□ -0.96
VPS26B-205ENST00000530402 FAM170BA6NMN3 283 aa9.05□□□□□ -0.96
VPS26B-205ENST00000530402 FSTP19883 344 aa9.05□□□□□ -0.96
VPS26B-205ENST00000530402 GNPTABQ3T906 1256 aa9.05□□□□□ -0.96
VPS26B-205ENST00000530402 ARHGAP27Q6ZUM4 889 aa9.05□□□□□ -0.96
VPS26B-205ENST00000530402 ZNF765Q7L2R6 523 aa9.05□□□□□ -0.96
VPS26B-205ENST00000530402 DPH6Q7L8W6 267 aa9.05□□□□□ -0.96
VPS26B-205ENST00000530402 TMEM192Q8IY95 271 aa9.05□□□□□ -0.96
VPS26B-205ENST00000530402 DNAJB8Q8NHS0 232 aa9.05□□□□□ -0.96
VPS26B-205ENST00000530402 PPP1R13LQ8WUF5 828 aa9.05□□□□□ -0.96
VPS26B-205ENST00000530402 LNPKQ9C0E8 428 aa9.05□□□□□ -0.96
VPS26B-205ENST00000530402 PRDM5Q9NQX1 630 aaPredicted RBP9.05□□□□□ -0.96
VPS26B-205ENST00000530402 PCDHB10Q9UN67 800 aa9.05□□□□□ -0.96
VPS26B-205ENST00000530402 LTBP3Q9NS15 1303 aa9.05□□□□□ -0.96
VPS26B-205ENST00000530402 CCDC85CA6NKD9 419 aa9.04□□□□□ -0.96
VPS26B-205ENST00000530402 WDR64B1ANS9 1081 aa9.04□□□□□ -0.96
VPS26B-205ENST00000530402 EOMESO95936 686 aa9.04□□□□□ -0.96
VPS26B-205ENST00000530402 IGLV1-40P01703 118 aa9.04□□□□□ -0.96
VPS26B-205ENST00000530402 BBS9Q3SYG4 887 aa9.04□□□□□ -0.96
VPS26B-205ENST00000530402 VHLLQ6RSH7 139 aa9.04□□□□□ -0.96
VPS26B-205ENST00000530402 GATA6Q92908 595 aa9.04□□□□□ -0.96
VPS26B-205ENST00000530402 ZNF512BQ96KM6 892 aaPredicted RBP9.04□□□□□ -0.96
VPS26B-205ENST00000530402 KREMEN1Q96MU8 473 aa9.04□□□□□ -0.96
VPS26B-205ENST00000530402 OSBPL1AQ9BXW6 950 aa9.04□□□□□ -0.96
VPS26B-205ENST00000530402 MKRN2Q9H000 416 aaKnown RBP9.04□□□□□ -0.96
VPS26B-205ENST00000530402 OSBPL2Q9H1P3 480 aa9.04□□□□□ -0.96
VPS26B-205ENST00000530402 SIRPGQ9P1W8 387 aa9.04□□□□□ -0.96
VPS26B-205ENST00000530402 SUCOQ9UBS9 1254 aaKnown RBP9.04□□□□□ -0.96
VPS26B-205ENST00000530402 GTF2IRD1Q9UHL9 959 aa9.04□□□□□ -0.96
VPS26B-205ENST00000530402 F13BP05160 661 aa9.03□□□□□ -0.96
VPS26B-205ENST00000530402 RNF4P78317 190 aa9.03□□□□□ -0.96
VPS26B-205ENST00000530402 SLC7A5Q01650 507 aa9.03□□□□□ -0.96
VPS26B-205ENST00000530402 RSPO4Q2I0M5 234 aaPredicted RBP9.03□□□□□ -0.96
VPS26B-205ENST00000530402 TDRD10Q5VZ19 366 aaKnown RBP9.03□□□□□ -0.96
VPS26B-205ENST00000530402 C6orf15Q6UXA7 325 aaPredicted RBP9.03□□□□□ -0.96
VPS26B-205ENST00000530402 SHISA5Q8N114 240 aa9.03□□□□□ -0.96
VPS26B-205ENST00000530402 CELF2-AS1Q8N7Q2 184 aa9.03□□□□□ -0.96
VPS26B-205ENST00000530402 SHKBP1Q8TBC3 707 aa9.03□□□□□ -0.96
VPS26B-205ENST00000530402 ZSWIM4Q9H7M6 989 aa9.03□□□□□ -0.96
VPS26B-205ENST00000530402 ZNF214Q9UL59 606 aaPredicted RBP9.03□□□□□ -0.96
VPS26B-205ENST00000530402 CBX7O95931 251 aa9.02□□□□□ -0.97
VPS26B-205ENST00000530402 IGHA1P01876 353 aa9.02□□□□□ -0.97
VPS26B-205ENST00000530402 TP53P04637 393 aaPredicted RBP9.02□□□□□ -0.97
VPS26B-205ENST00000530402 PMS1P54277 932 aaKnown RBP9.02□□□□□ -0.97
VPS26B-205ENST00000530402 DDR2Q16832 855 aa9.02□□□□□ -0.97
VPS26B-205ENST00000530402 CCDC144BQ3MJ40 725 aa9.02□□□□□ -0.97
VPS26B-205ENST00000530402 NKAPLQ5M9Q1 402 aa9.02□□□□□ -0.97
VPS26B-205ENST00000530402 SFRP5Q5T4F7 317 aa9.02□□□□□ -0.97
VPS26B-205ENST00000530402 KIAA1211LQ6NV74 962 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms