RNA–Protein interactions for RNA: ENST00000529565.1

CASP4-207, Transcript of caspase 4, humanhuman

TSL 2

Gene CASP4, Length 4,745 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-207ENST00000529565 ZNF512BQ96KM6 892 aaPredicted RBP5.28□□□□□ -1.56
CASP4-207ENST00000529565 CRAMP1Q96RY5 1269 aa5.28□□□□□ -1.56
CASP4-207ENST00000529565 RIPOR2Q9Y4F9 1068 aa5.28□□□□□ -1.56
CASP4-207ENST00000529565 KLRF2D3W0D1 207 aa5.28□□□□□ -1.56
CASP4-207ENST00000529565 CCNT1O60563 726 aaKnown RBP5.28□□□□□ -1.56
CASP4-207ENST00000529565 RPL13P26373 211 aaKnown RBP5.28□□□□□ -1.56
CASP4-207ENST00000529565 MYL5Q02045 173 aa5.28□□□□□ -1.56
CASP4-207ENST00000529565 OTUD7BQ6GQQ9 843 aa5.28□□□□□ -1.56
CASP4-207ENST00000529565 MLKLQ8NB16 471 aa5.28□□□□□ -1.56
CASP4-207ENST00000529565 EHBP1Q8NDI1 1231 aa5.28□□□□□ -1.56
CASP4-207ENST00000529565 FBXO18Q8NFZ0 1043 aa5.28□□□□□ -1.56
CASP4-207ENST00000529565 LMBRD1Q9NUN5 540 aa5.28□□□□□ -1.56
CASP4-207ENST00000529565 SERPINB13Q9UIV8 391 aa5.28□□□□□ -1.56
CASP4-207ENST00000529565 SUGT1Q9Y2Z0 365 aa5.28□□□□□ -1.56
CASP4-207ENST00000529565 KNDC1Q76NI1 1749 aa5.28□□□□□ -1.56
CASP4-207ENST00000529565 MYOM1P52179 1685 aa5.28□□□□□ -1.56
CASP4-207ENST00000529565 COL5A2P05997 1499 aaPredicted RBP5.28□□□□□ -1.56
CASP4-207ENST00000529565 SMCO2A6NFE2 343 aa5.28□□□□□ -1.56
CASP4-207ENST00000529565 ADD1P35611 737 aaKnown RBP5.28□□□□□ -1.56
CASP4-207ENST00000529565 CCT6AP40227 531 aaKnown RBP5.28□□□□□ -1.56
CASP4-207ENST00000529565 TRAPPC10P48553 1259 aa5.28□□□□□ -1.56
CASP4-207ENST00000529565 RCAN1P53805 252 aa5.28□□□□□ -1.56
CASP4-207ENST00000529565 ZNF445P59923 1031 aa5.28□□□□□ -1.56
CASP4-207ENST00000529565 ABCB5Q2M3G0 1257 aa5.28□□□□□ -1.56
CASP4-207ENST00000529565 CNNM4Q6P4Q7 775 aa5.28□□□□□ -1.56
CASP4-207ENST00000529565 PI16Q6UXB8 463 aa5.28□□□□□ -1.56
CASP4-207ENST00000529565 ATG9AQ7Z3C6 839 aa5.28□□□□□ -1.56
CASP4-207ENST00000529565 FMNL3Q8IVF7 1028 aa5.28□□□□□ -1.56
CASP4-207ENST00000529565 FOXP4Q8IVH2 680 aaPredicted RBP5.28□□□□□ -1.56
CASP4-207ENST00000529565 BICD1Q96G01 975 aa5.28□□□□□ -1.56
CASP4-207ENST00000529565 KANSL2Q9H9L4 492 aa5.28□□□□□ -1.56
CASP4-207ENST00000529565 VPS54Q9P1Q0 977 aa5.28□□□□□ -1.56
CASP4-207ENST00000529565 MRPL11Q9Y3B7 192 aaKnown RBP5.28□□□□□ -1.56
CASP4-207ENST00000529565 CSADQ9Y600 493 aa5.28□□□□□ -1.56
CASP4-207ENST00000529565 SPDYE2BA6NHP3 402 aa5.28□□□□□ -1.56
CASP4-207ENST00000529565 SH2B2O14492 632 aaPredicted RBP5.28□□□□□ -1.56
CASP4-207ENST00000529565 FOSP01100 380 aaPredicted RBP5.28□□□□□ -1.56
CASP4-207ENST00000529565 SPDYE6P0CI01 402 aa5.28□□□□□ -1.56
CASP4-207ENST00000529565 DYNLL1P63167 89 aaKnown RBP5.28□□□□□ -1.56
CASP4-207ENST00000529565 SCRN1Q12765 414 aa5.28□□□□□ -1.56
CASP4-207ENST00000529565 SPDYE2Q495Y8 402 aa5.28□□□□□ -1.56
CASP4-207ENST00000529565 FAM177A1Q8N128 213 aaPredicted RBP5.28□□□□□ -1.56
CASP4-207ENST00000529565 ZC3H15Q8WU90 426 aaKnown RBP5.28□□□□□ -1.56
CASP4-207ENST00000529565 CELF1Q92879 486 aaKnown RBP5.28□□□□□ -1.56
CASP4-207ENST00000529565 TTC14Q96N46 770 aa5.28□□□□□ -1.56
CASP4-207ENST00000529565 PIM2Q9P1W9 311 aa5.28□□□□□ -1.56
CASP4-207ENST00000529565 LRWD1Q9UFC0 647 aa5.28□□□□□ -1.56
CASP4-207ENST00000529565 KCNJ14Q9UNX9 436 aa5.28□□□□□ -1.56
CASP4-207ENST00000529565 ZNF202O95125 648 aa5.27□□□□□ -1.57
CASP4-207ENST00000529565 FMNL1O95466 1100 aaPredicted RBP5.27□□□□□ -1.57
CASP4-207ENST00000529565 TTLL1O95922 423 aa5.27□□□□□ -1.57
CASP4-207ENST00000529565 CYP2E1P05181 493 aaPredicted RBP5.27□□□□□ -1.57
CASP4-207ENST00000529565 IFNAR1P17181 557 aa5.27□□□□□ -1.57
CASP4-207ENST00000529565 CYLC1P35663 651 aaPredicted RBP5.27□□□□□ -1.57
CASP4-207ENST00000529565 SLFN13Q68D06 897 aa5.27□□□□□ -1.57
CASP4-207ENST00000529565 ARHGAP27Q6ZUM4 889 aa5.27□□□□□ -1.57
CASP4-207ENST00000529565 FCHSD1Q86WN1 690 aa5.27□□□□□ -1.57
CASP4-207ENST00000529565 CPLX3Q8WVH0 158 aa5.27□□□□□ -1.57
CASP4-207ENST00000529565 STAG1Q8WVM7 1258 aa5.27□□□□□ -1.57
CASP4-207ENST00000529565 NT5C3AQ9H0P0 336 aa5.27□□□□□ -1.57
CASP4-207ENST00000529565 FOXP1Q9H334 677 aaPredicted RBP5.27□□□□□ -1.57
CASP4-207ENST00000529565 CD209Q9NNX6 404 aa5.27□□□□□ -1.57
CASP4-207ENST00000529565 PI4KBQ9UBF8 816 aa5.27□□□□□ -1.57
CASP4-207ENST00000529565 KCNG1Q9UIX4 513 aa5.27□□□□□ -1.57
CASP4-207ENST00000529565 TCP10L2B9ZVM9 353 aa5.27□□□□□ -1.57
CASP4-207ENST00000529565 PABPC4Q13310 644 aaKnown RBP eCLIP5.27□□□□□ -1.57
CASP4-207ENST00000529565 CALCRLQ16602 461 aa5.27□□□□□ -1.57
CASP4-207ENST00000529565 IFI16Q16666 785 aaKnown RBP5.27□□□□□ -1.57
CASP4-207ENST00000529565 DGKHQ86XP1 1220 aa5.27□□□□□ -1.57
CASP4-207ENST00000529565 SYNE4Q8N205 404 aa5.27□□□□□ -1.57
CASP4-207ENST00000529565 LINC00116Q8NCU8 138 aa5.27□□□□□ -1.57
CASP4-207ENST00000529565 NSUN7Q8NE18 718 aaKnown RBP5.27□□□□□ -1.57
CASP4-207ENST00000529565 TBC1D5Q92609 795 aa5.27□□□□□ -1.57
CASP4-207ENST00000529565 ALS2CR12Q96Q35 445 aa5.27□□□□□ -1.57
CASP4-207ENST00000529565 GBP3Q9H0R5 595 aa5.27□□□□□ -1.57
CASP4-207ENST00000529565 DBNDD1Q9H9R9 158 aa5.27□□□□□ -1.57
CASP4-207ENST00000529565 XRCC6P12956 609 aaKnown RBP eCLIP5.27□□□□□ -1.57
CASP4-207ENST00000529565 MCM3P25205 808 aa5.27□□□□□ -1.57
CASP4-207ENST00000529565 CASQ1P31415 396 aa5.27□□□□□ -1.57
CASP4-207ENST00000529565 CIAPIN1Q6FI81 312 aa5.27□□□□□ -1.57
CASP4-207ENST00000529565 FAM173BQ6P4H8 233 aa5.27□□□□□ -1.57
CASP4-207ENST00000529565 ARHGAP30Q7Z6I6 1101 aaPredicted RBP5.27□□□□□ -1.57
CASP4-207ENST00000529565 MCF2L2Q86YR7 1114 aa5.27□□□□□ -1.57
CASP4-207ENST00000529565 ALDH8A1Q9H2A2 487 aaPredicted RBP5.27□□□□□ -1.57
CASP4-207ENST00000529565 KDM3AQ9Y4C1 1321 aa5.27□□□□□ -1.57
CASP4-207ENST00000529565 LAD1O00515 517 aa5.26□□□□□ -1.57
CASP4-207ENST00000529565 POLR2DO15514 142 aaKnown RBP5.26□□□□□ -1.57
CASP4-207ENST00000529565 PRKAB2O43741 272 aa5.26□□□□□ -1.57
CASP4-207ENST00000529565 NTSR2O95665 410 aa5.26□□□□□ -1.57
CASP4-207ENST00000529565 CMA1P23946 247 aa5.26□□□□□ -1.57
CASP4-207ENST00000529565 TXKP42681 527 aa5.26□□□□□ -1.57
CASP4-207ENST00000529565 ITPK1Q13572 414 aa5.26□□□□□ -1.57
CASP4-207ENST00000529565 KIF4BQ2VIQ3 1234 aa5.26□□□□□ -1.57
CASP4-207ENST00000529565 TSGA10IPQ3SY00 556 aa5.26□□□□□ -1.57
CASP4-207ENST00000529565 SUPT20HL1Q3ZLR7 823 aa5.26□□□□□ -1.57
CASP4-207ENST00000529565 FBXO11Q86XK2 927 aa5.26□□□□□ -1.57
CASP4-207ENST00000529565 SULF1Q8IWU6 871 aa5.26□□□□□ -1.57
CASP4-207ENST00000529565 UBXN4Q92575 508 aa5.26□□□□□ -1.57
CASP4-207ENST00000529565 DCPSQ96C86 337 aaKnown RBP5.26□□□□□ -1.57
CASP4-207ENST00000529565 SPAG5Q96R06 1193 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms