RNA–Protein interactions for RNA: ENST00000518882.2

PCDHGA11-202, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDHGA11, Length 2,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-202ENST00000518882 AATFQ9NY61 560 aaKnown RBP eCLIP18.87■□□□□ 0.61
PCDHGA11-202ENST00000518882 BCL9O00512 1426 aa18.87■□□□□ 0.61
PCDHGA11-202ENST00000518882 POLR3GO15318 223 aaPredicted RBP18.86■□□□□ 0.61
PCDHGA11-202ENST00000518882 TNKSO95271 1327 aa18.86■□□□□ 0.61
PCDHGA11-202ENST00000518882 FAM193AP78312 1265 aa18.86■□□□□ 0.61
PCDHGA11-202ENST00000518882 TMTC2Q8N394 836 aa18.86■□□□□ 0.61
PCDHGA11-202ENST00000518882 CCDC12Q8WUD4 166 aaPredicted RBP18.86■□□□□ 0.61
PCDHGA11-202ENST00000518882 CPLX3Q8WVH0 158 aa18.86■□□□□ 0.61
PCDHGA11-202ENST00000518882 PANX2Q96RD6 677 aa18.86■□□□□ 0.61
PCDHGA11-202ENST00000518882 UBAC1Q9BSL1 405 aa18.86■□□□□ 0.61
PCDHGA11-202ENST00000518882 PARD6BQ9BYG5 372 aa18.86■□□□□ 0.61
PCDHGA11-202ENST00000518882 LZTFL1Q9NQ48 299 aa18.86■□□□□ 0.61
PCDHGA11-202ENST00000518882 SYNRGQ9UMZ2 1314 aa18.86■□□□□ 0.61
PCDHGA11-202ENST00000518882 ERVV-1B6SEH8 477 aa18.86■□□□□ 0.61
PCDHGA11-202ENST00000518882 PBX1P40424 430 aa18.86■□□□□ 0.61
PCDHGA11-202ENST00000518882 NOM1Q5C9Z4 860 aaKnown RBP18.86■□□□□ 0.61
PCDHGA11-202ENST00000518882 SPATA1Q5VX52 437 aa18.86■□□□□ 0.61
PCDHGA11-202ENST00000518882 SUSD4Q5VX71 490 aa18.86■□□□□ 0.61
PCDHGA11-202ENST00000518882 SH3RF1Q7Z6J0 888 aa18.86■□□□□ 0.61
PCDHGA11-202ENST00000518882 PAGE5Q96GU1 130 aa18.86■□□□□ 0.61
PCDHGA11-202ENST00000518882 RNF26Q9BY78 433 aaPredicted RBP18.86■□□□□ 0.61
PCDHGA11-202ENST00000518882 BAZ2BQ9UIF8 2168 aaKnown RBP18.85■□□□□ 0.61
PCDHGA11-202ENST00000518882 TRIM75PA6NK02 468 aa18.85■□□□□ 0.61
PCDHGA11-202ENST00000518882 MINDY4BA8MYZ0 360 aa18.85■□□□□ 0.61
PCDHGA11-202ENST00000518882 IGSF22Q8N9C0 903 aa18.85■□□□□ 0.61
PCDHGA11-202ENST00000518882 SYMPKQ92797 1274 aaKnown RBP18.85■□□□□ 0.61
PCDHGA11-202ENST00000518882 ADD3Q9UEY8 706 aaKnown RBP18.85■□□□□ 0.61
PCDHGA11-202ENST00000518882 ADGRG1Q9Y653 693 aa18.85■□□□□ 0.61
PCDHGA11-202ENST00000518882 CCDC175P0C221 793 aa18.85■□□□□ 0.61
PCDHGA11-202ENST00000518882 RCAN1P53805 252 aa18.85■□□□□ 0.61
PCDHGA11-202ENST00000518882 CDKAL1Q5VV42 579 aa18.85■□□□□ 0.61
PCDHGA11-202ENST00000518882 CREBRFQ8IUR6 639 aa18.85■□□□□ 0.61
PCDHGA11-202ENST00000518882 MTA3Q9BTC8 594 aa18.85■□□□□ 0.61
PCDHGA11-202ENST00000518882 PHF20Q9BVI0 1012 aa18.85■□□□□ 0.61
PCDHGA11-202ENST00000518882 RNF41Q9H4P4 317 aaPredicted RBP18.85■□□□□ 0.61
PCDHGA11-202ENST00000518882 LRP2BPQ9P2M1 347 aa18.85■□□□□ 0.61
PCDHGA11-202ENST00000518882 IQSEC3Q9UPP2 1182 aaPredicted RBP18.85■□□□□ 0.61
PCDHGA11-202ENST00000518882 COL4A1P02462 1669 aa18.85■□□□□ 0.61
PCDHGA11-202ENST00000518882 MYH13Q9UKX3 1938 aa18.85■□□□□ 0.61
PCDHGA11-202ENST00000518882 CCDC66A2RUB6 948 aa18.84■□□□□ 0.61
PCDHGA11-202ENST00000518882 ATP8B1O43520 1251 aa18.84■□□□□ 0.61
PCDHGA11-202ENST00000518882 FUT2Q10981 343 aa18.84■□□□□ 0.61
PCDHGA11-202ENST00000518882 RABGGTAQ92696 567 aa18.84■□□□□ 0.61
PCDHGA11-202ENST00000518882 CCDC34Q96HJ3 373 aa18.84■□□□□ 0.61
PCDHGA11-202ENST00000518882 ZCCHC17Q9NP64 241 aaKnown RBP18.84■□□□□ 0.61
PCDHGA11-202ENST00000518882 ZKSCAN7Q9P0L1 754 aaPredicted RBP18.84■□□□□ 0.61
PCDHGA11-202ENST00000518882 COBLO75128 1261 aa18.84■□□□□ 0.61
PCDHGA11-202ENST00000518882 DPYDQ12882 1025 aa18.84■□□□□ 0.61
PCDHGA11-202ENST00000518882 ENAHQ8N8S7 591 aaPredicted RBP18.84■□□□□ 0.61
PCDHGA11-202ENST00000518882 ZSWIM4Q9H7M6 989 aa18.84■□□□□ 0.61
PCDHGA11-202ENST00000518882 CICQ96RK0 1608 aaPredicted RBP18.83■□□□□ 0.61
PCDHGA11-202ENST00000518882 PPP1R3GB7ZBB8 358 aa18.83■□□□□ 0.61
PCDHGA11-202ENST00000518882 PLEKHA8P1O95397 391 aa18.83■□□□□ 0.61
PCDHGA11-202ENST00000518882 CYP7A1P22680 504 aa18.83■□□□□ 0.61
PCDHGA11-202ENST00000518882 KRT2P35908 639 aa18.83■□□□□ 0.61
PCDHGA11-202ENST00000518882 STAMQ92783 540 aa18.83■□□□□ 0.61
PCDHGA11-202ENST00000518882 GOLGA1Q92805 767 aa18.83■□□□□ 0.61
PCDHGA11-202ENST00000518882 MFAP3LO75121 409 aa18.83■□□□□ 0.6
PCDHGA11-202ENST00000518882 IL6STP40189 918 aaPredicted RBP18.83■□□□□ 0.6
PCDHGA11-202ENST00000518882 DUOX1Q9NRD9 1551 aa18.82■□□□□ 0.6
PCDHGA11-202ENST00000518882 PHLPP1O60346 1717 aa18.82■□□□□ 0.6
PCDHGA11-202ENST00000518882 CYP2D7A0A087X1C5 515 aa18.82■□□□□ 0.6
PCDHGA11-202ENST00000518882 CASP14P31944 242 aa18.82■□□□□ 0.6
PCDHGA11-202ENST00000518882 PPFIBP1Q86W92 1011 aa18.82■□□□□ 0.6
PCDHGA11-202ENST00000518882 ESR2Q92731 530 aa18.82■□□□□ 0.6
PCDHGA11-202ENST00000518882 FUT8Q9BYC5 575 aa18.82■□□□□ 0.6
PCDHGA11-202ENST00000518882 ARFGAP3Q9NP61 516 aa18.82■□□□□ 0.6
PCDHGA11-202ENST00000518882 V9GY48 417 aaPredicted RBP18.82■□□□□ 0.6
PCDHGA11-202ENST00000518882 RTL9Q8NET4 1388 aa18.82■□□□□ 0.6
PCDHGA11-202ENST00000518882 BCL9LQ86UU0 1499 aa18.82■□□□□ 0.6
PCDHGA11-202ENST00000518882 GYPCP04921 128 aa18.81■□□□□ 0.6
PCDHGA11-202ENST00000518882 OAS2P29728 719 aaKnown RBP18.81■□□□□ 0.6
PCDHGA11-202ENST00000518882 TXLNAP40222 546 aa18.81■□□□□ 0.6
PCDHGA11-202ENST00000518882 FXR1P51114 621 aaKnown RBP eCLIP18.81■□□□□ 0.6
PCDHGA11-202ENST00000518882 AKAP17AQ02040 695 aaKnown RBP18.81■□□□□ 0.6
PCDHGA11-202ENST00000518882 ZNF174Q15697 407 aa18.81■□□□□ 0.6
PCDHGA11-202ENST00000518882 NPY5RQ15761 445 aa18.81■□□□□ 0.6
PCDHGA11-202ENST00000518882 AK7Q96M32 723 aa18.81■□□□□ 0.6
PCDHGA11-202ENST00000518882 ST5P78524 1137 aa18.81■□□□□ 0.6
PCDHGA11-202ENST00000518882 SMC1AQ14683 1233 aaKnown RBP18.81■□□□□ 0.6
PCDHGA11-202ENST00000518882 CT47A1Q5JQC4 288 aaPredicted RBP18.81■□□□□ 0.6
PCDHGA11-202ENST00000518882 TNFRSF25Q93038 417 aa18.81■□□□□ 0.6
PCDHGA11-202ENST00000518882 GSDMAQ96QA5 445 aa18.81■□□□□ 0.6
PCDHGA11-202ENST00000518882 ANAPC4Q9UJX5 808 aa18.81■□□□□ 0.6
PCDHGA11-202ENST00000518882 DLEC1Q9Y238 1755 aa18.81■□□□□ 0.6
PCDHGA11-202ENST00000518882 CACNA1SQ13698 1873 aa18.81■□□□□ 0.6
PCDHGA11-202ENST00000518882 WTIPA6NIX2 430 aaPredicted RBP18.8■□□□□ 0.6
PCDHGA11-202ENST00000518882 ABL1P00519 1130 aa18.8■□□□□ 0.6
PCDHGA11-202ENST00000518882 XBP1P17861 261 aa18.8■□□□□ 0.6
PCDHGA11-202ENST00000518882 RASGRP2Q7LDG7 609 aa18.8■□□□□ 0.6
PCDHGA11-202ENST00000518882 ZSCAN10Q96SZ4 725 aaPredicted RBP18.8■□□□□ 0.6
PCDHGA11-202ENST00000518882 NAA15Q9BXJ9 866 aaKnown RBP18.8■□□□□ 0.6
PCDHGA11-202ENST00000518882 SLAIN2Q9P270 581 aa18.8■□□□□ 0.6
PCDHGA11-202ENST00000518882 ABCF2Q9UG63 623 aa18.8■□□□□ 0.6
PCDHGA11-202ENST00000518882 PUF60Q9UHX1 559 aaKnown RBP18.8■□□□□ 0.6
PCDHGA11-202ENST00000518882 CTNND2Q9UQB3 1225 aa18.8■□□□□ 0.6
PCDHGA11-202ENST00000518882 XDHP47989 1333 aa18.8■□□□□ 0.6
PCDHGA11-202ENST00000518882 PRPF3O43395 683 aaKnown RBP18.8■□□□□ 0.6
PCDHGA11-202ENST00000518882 TFRCP02786 760 aaKnown RBP18.8■□□□□ 0.6
PCDHGA11-202ENST00000518882 CCT6AP40227 531 aaKnown RBP18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms