RNA–Protein interactions for RNA: ENST00000508668.1

HMGN1P11-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 11, humanhuman

BASIC

Gene HMGN1P11, Length 303 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P11-201ENST00000508668 USP42Q9H9J4 1324 aaKnown RBP4.94□□□□□ -1.62
HMGN1P11-201ENST00000508668 MAPK8IP3Q9UPT6 1336 aa4.94□□□□□ -1.62
HMGN1P11-201ENST00000508668 ANKRD33BA6NCL7 494 aa4.93□□□□□ -1.62
HMGN1P11-201ENST00000508668 RNMTO43148 476 aaKnown RBP4.93□□□□□ -1.62
HMGN1P11-201ENST00000508668 TREHO43280 583 aa4.93□□□□□ -1.62
HMGN1P11-201ENST00000508668 GDF11O95390 407 aa4.93□□□□□ -1.62
HMGN1P11-201ENST00000508668 GHRHP01286 108 aa4.93□□□□□ -1.62
HMGN1P11-201ENST00000508668 IGHA2P01877 340 aa4.93□□□□□ -1.62
HMGN1P11-201ENST00000508668 SERPINB2P05120 415 aa4.93□□□□□ -1.62
HMGN1P11-201ENST00000508668 POLR3DP05423 398 aaPredicted RBP4.93□□□□□ -1.62
HMGN1P11-201ENST00000508668 NEFLP07196 543 aa4.93□□□□□ -1.62
HMGN1P11-201ENST00000508668 LMNB1P20700 586 aa4.93□□□□□ -1.62
HMGN1P11-201ENST00000508668 IL13P35225 146 aa4.93□□□□□ -1.62
HMGN1P11-201ENST00000508668 MAPK8P45983 427 aa4.93□□□□□ -1.62
HMGN1P11-201ENST00000508668 KCNMA1Q12791 1236 aa4.93□□□□□ -1.62
HMGN1P11-201ENST00000508668 FSTL1Q12841 308 aa4.93□□□□□ -1.62
HMGN1P11-201ENST00000508668 HYAL2Q12891 473 aa4.93□□□□□ -1.62
HMGN1P11-201ENST00000508668 PKD1L3Q7Z443 1732 aa4.93□□□□□ -1.62
HMGN1P11-201ENST00000508668 NBPF5PQ86XG9 351 aaPredicted RBP4.93□□□□□ -1.62
HMGN1P11-201ENST00000508668 DNAJC10Q8IXB1 793 aa4.93□□□□□ -1.62
HMGN1P11-201ENST00000508668 CNBD1Q8NA66 436 aa4.93□□□□□ -1.62
HMGN1P11-201ENST00000508668 NUDT8Q8WV74 236 aa4.93□□□□□ -1.62
HMGN1P11-201ENST00000508668 BTBD6Q96KE9 485 aa4.93□□□□□ -1.62
HMGN1P11-201ENST00000508668 SPACA7Q96KW9 195 aa4.93□□□□□ -1.62
HMGN1P11-201ENST00000508668 MDFIQ99750 246 aa4.93□□□□□ -1.62
HMGN1P11-201ENST00000508668 SRP68Q9UHB9 627 aaKnown RBP4.93□□□□□ -1.62
HMGN1P11-201ENST00000508668 NARFQ9UHQ1 456 aa4.93□□□□□ -1.62
HMGN1P11-201ENST00000508668 ANKRD26Q9UPS8 1709 aa4.93□□□□□ -1.62
HMGN1P11-201ENST00000508668 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP4.93□□□□□ -1.62
HMGN1P11-201ENST00000508668 CICQ96RK0 1608 aaPredicted RBP4.93□□□□□ -1.62
HMGN1P11-201ENST00000508668 ITGB4P16144 1822 aa4.93□□□□□ -1.62
HMGN1P11-201ENST00000508668 CPNE3O75131 537 aaKnown RBP4.92□□□□□ -1.62
HMGN1P11-201ENST00000508668 VEGFAP15692 232 aaPredicted RBP4.92□□□□□ -1.62
HMGN1P11-201ENST00000508668 CHRNA5P30532 468 aa4.92□□□□□ -1.62
HMGN1P11-201ENST00000508668 MFAP1P55081 439 aaKnown RBP4.92□□□□□ -1.62
HMGN1P11-201ENST00000508668 PLCB3Q01970 1234 aa4.92□□□□□ -1.62
HMGN1P11-201ENST00000508668 SLC39A6Q13433 755 aa4.92□□□□□ -1.62
HMGN1P11-201ENST00000508668 PSAPL1Q6NUJ1 521 aa4.92□□□□□ -1.62
HMGN1P11-201ENST00000508668 ELMSAN1Q6PJG2 1045 aa4.92□□□□□ -1.62
HMGN1P11-201ENST00000508668 TPTE2Q6XPS3 522 aa4.92□□□□□ -1.62
HMGN1P11-201ENST00000508668 KIF6Q6ZMV9 814 aa4.92□□□□□ -1.62
HMGN1P11-201ENST00000508668 MICALL1Q8N3F8 863 aa4.92□□□□□ -1.62
HMGN1P11-201ENST00000508668 PNISRQ8TF01 805 aaKnown RBP4.92□□□□□ -1.62
HMGN1P11-201ENST00000508668 ALKBH8Q96BT7 664 aaKnown RBP4.92□□□□□ -1.62
HMGN1P11-201ENST00000508668 SMG9Q9H0W8 520 aaKnown RBP4.92□□□□□ -1.62
HMGN1P11-201ENST00000508668 RBSNQ9H1K0 784 aa4.92□□□□□ -1.62
HMGN1P11-201ENST00000508668 ZFYVE28Q9HCC9 887 aa4.92□□□□□ -1.62
HMGN1P11-201ENST00000508668 JPH1Q9HDC5 661 aaPredicted RBP4.92□□□□□ -1.62
HMGN1P11-201ENST00000508668 STARD13Q9Y3M8 1113 aa4.92□□□□□ -1.62
HMGN1P11-201ENST00000508668 KIF7Q2M1P5 1343 aa4.92□□□□□ -1.62
HMGN1P11-201ENST00000508668 SHANK3Q9BYB0 1731 aa4.92□□□□□ -1.62
HMGN1P11-201ENST00000508668 COL15A1P39059 1388 aa4.91□□□□□ -1.62
HMGN1P11-201ENST00000508668 NCAPD2Q15021 1401 aa4.91□□□□□ -1.62
HMGN1P11-201ENST00000508668 PNMA6FA0A0J9YX94 578 aa4.91□□□□□ -1.62
HMGN1P11-201ENST00000508668 IQCA1LA6NCM1 817 aa4.91□□□□□ -1.62
HMGN1P11-201ENST00000508668 M0R082 166 aa4.91□□□□□ -1.62
HMGN1P11-201ENST00000508668 EIF1AYO14602 144 aaKnown RBP4.91□□□□□ -1.62
HMGN1P11-201ENST00000508668 ARHGEF15O94989 841 aa4.91□□□□□ -1.62
HMGN1P11-201ENST00000508668 KIF4AO95239 1232 aa4.91□□□□□ -1.62
HMGN1P11-201ENST00000508668 ALBP02768 609 aa4.91□□□□□ -1.62
HMGN1P11-201ENST00000508668 CYP19A1P11511 503 aaPredicted RBP4.91□□□□□ -1.62
HMGN1P11-201ENST00000508668 HOXD8P13378 290 aaPredicted RBP4.91□□□□□ -1.62
HMGN1P11-201ENST00000508668 ACPPP15309 386 aa4.91□□□□□ -1.62
HMGN1P11-201ENST00000508668 PRKAR2BP31323 418 aa4.91□□□□□ -1.62
HMGN1P11-201ENST00000508668 IL6STP40189 918 aaPredicted RBP4.91□□□□□ -1.62
HMGN1P11-201ENST00000508668 ATP11AP98196 1134 aa4.91□□□□□ -1.62
HMGN1P11-201ENST00000508668 DSC3Q14574 896 aa4.91□□□□□ -1.62
HMGN1P11-201ENST00000508668 MTHFSDQ2M296 383 aaKnown RBP4.91□□□□□ -1.62
HMGN1P11-201ENST00000508668 PERM1Q5SV97 790 aa4.91□□□□□ -1.62
HMGN1P11-201ENST00000508668 KANK3Q6NY19 840 aa4.91□□□□□ -1.62
HMGN1P11-201ENST00000508668 ZNF790Q6PG37 636 aa4.91□□□□□ -1.62
HMGN1P11-201ENST00000508668 DNAJC14Q6Y2X3 702 aaPredicted RBP4.91□□□□□ -1.62
HMGN1P11-201ENST00000508668 C8orf86Q6ZUL3 223 aa4.91□□□□□ -1.62
HMGN1P11-201ENST00000508668 ZNF417Q8TAU3 575 aa4.91□□□□□ -1.62
HMGN1P11-201ENST00000508668 JDP2Q8WYK2 163 aa4.91□□□□□ -1.62
HMGN1P11-201ENST00000508668 PMEPA1Q969W9 287 aa4.91□□□□□ -1.62
HMGN1P11-201ENST00000508668 CSRNP1Q96S65 589 aa4.91□□□□□ -1.62
HMGN1P11-201ENST00000508668 ZNF587Q96SQ5 575 aaPredicted RBP4.91□□□□□ -1.62
HMGN1P11-201ENST00000508668 LPIN3Q9BQK8 851 aa4.91□□□□□ -1.62
HMGN1P11-201ENST00000508668 BRIP1Q9BX63 1249 aa4.91□□□□□ -1.62
HMGN1P11-201ENST00000508668 TAOK3Q9H2K8 898 aa4.91□□□□□ -1.62
HMGN1P11-201ENST00000508668 LGR6Q9HBX8 967 aa4.91□□□□□ -1.62
HMGN1P11-201ENST00000508668 CARMIL3Q8ND23 1372 aa4.91□□□□□ -1.62
HMGN1P11-201ENST00000508668 TAF1LQ8IZX4 1826 aa4.9□□□□□ -1.62
HMGN1P11-201ENST00000508668 TUBGCP6Q96RT7 1819 aa4.9□□□□□ -1.62
HMGN1P11-201ENST00000508668 C10orf71Q711Q0 1435 aa4.9□□□□□ -1.62
HMGN1P11-201ENST00000508668 PXDNLA1KZ92 1463 aa4.9□□□□□ -1.62
HMGN1P11-201ENST00000508668 FAM177BA6PVY3 158 aa4.9□□□□□ -1.63
HMGN1P11-201ENST00000508668 POLRMTO00411 1230 aaKnown RBP4.9□□□□□ -1.63
HMGN1P11-201ENST00000508668 TRPA1O75762 1119 aa4.9□□□□□ -1.63
HMGN1P11-201ENST00000508668 RGS9O75916 674 aaPredicted RBP4.9□□□□□ -1.63
HMGN1P11-201ENST00000508668 P4HBP07237 508 aaKnown RBP4.9□□□□□ -1.63
HMGN1P11-201ENST00000508668 SNRPA1P09661 255 aaKnown RBP4.9□□□□□ -1.63
HMGN1P11-201ENST00000508668 EDN3P14138 238 aa4.9□□□□□ -1.63
HMGN1P11-201ENST00000508668 ALDH1B1P30837 517 aa4.9□□□□□ -1.63
HMGN1P11-201ENST00000508668 FMR1Q06787 632 aaKnown RBP eCLIP4.9□□□□□ -1.63
HMGN1P11-201ENST00000508668 LMOD3Q0VAK6 560 aa4.9□□□□□ -1.63
HMGN1P11-201ENST00000508668 NFIXQ14938 502 aa4.9□□□□□ -1.63
HMGN1P11-201ENST00000508668 INTS5Q6P9B9 1019 aaKnown RBP4.9□□□□□ -1.63
HMGN1P11-201ENST00000508668 NGEFQ8N5V2 710 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms