RNA–Protein interactions for RNA: ENST00000498020.1

HLA-DMB-262, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

Gene HLA-DMB, Length 4,569 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-262ENST00000498020 KIF23Q02241 960 aaPredicted RBP9.11□□□□□ -0.95
HLA-DMB-262ENST00000498020 ITPK1Q13572 414 aa9.11□□□□□ -0.95
HLA-DMB-262ENST00000498020 COL23A1Q86Y22 540 aaPredicted RBP9.11□□□□□ -0.95
HLA-DMB-262ENST00000498020 FBXL16Q8N461 479 aa9.11□□□□□ -0.95
HLA-DMB-262ENST00000498020 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.11□□□□□ -0.95
HLA-DMB-262ENST00000498020 ZSWIM5Q9P217 1185 aa9.11□□□□□ -0.95
HLA-DMB-262ENST00000498020 CELF2O95319 508 aaKnown RBP9.11□□□□□ -0.95
HLA-DMB-262ENST00000498020 CMA1P23946 247 aa9.11□□□□□ -0.95
HLA-DMB-262ENST00000498020 ZNF75DP51815 510 aa9.11□□□□□ -0.95
HLA-DMB-262ENST00000498020 CUL5Q93034 780 aa9.11□□□□□ -0.95
HLA-DMB-262ENST00000498020 PRIMPOLQ96LW4 560 aa9.11□□□□□ -0.95
HLA-DMB-262ENST00000498020 SYT17Q9BSW7 474 aa9.11□□□□□ -0.95
HLA-DMB-262ENST00000498020 SPC25Q9HBM1 224 aa9.11□□□□□ -0.95
HLA-DMB-262ENST00000498020 NARFQ9UHQ1 456 aa9.11□□□□□ -0.95
HLA-DMB-262ENST00000498020 PRKAB2O43741 272 aa9.11□□□□□ -0.95
HLA-DMB-262ENST00000498020 NTSR2O95665 410 aa9.11□□□□□ -0.95
HLA-DMB-262ENST00000498020 IFNAR1P17181 557 aa9.11□□□□□ -0.95
HLA-DMB-262ENST00000498020 SFPQP23246 707 aaKnown RBP eCLIP9.11□□□□□ -0.95
HLA-DMB-262ENST00000498020 TERF1P54274 439 aa9.11□□□□□ -0.95
HLA-DMB-262ENST00000498020 SF3B3Q15393 1217 aaKnown RBP9.11□□□□□ -0.95
HLA-DMB-262ENST00000498020 FANCBQ8NB91 859 aa9.11□□□□□ -0.95
HLA-DMB-262ENST00000498020 TDRD7Q8NHU6 1098 aaKnown RBP9.11□□□□□ -0.95
HLA-DMB-262ENST00000498020 SDR42E1Q8WUS8 393 aa9.11□□□□□ -0.95
HLA-DMB-262ENST00000498020 USP40Q9NVE5 1235 aa9.11□□□□□ -0.95
HLA-DMB-262ENST00000498020 MYO6Q9UM54 1294 aa9.11□□□□□ -0.95
HLA-DMB-262ENST00000498020 MARF1Q9Y4F3 1742 aaKnown RBP9.11□□□□□ -0.95
HLA-DMB-262ENST00000498020 PPM1FP49593 454 aaPredicted RBP9.1□□□□□ -0.95
HLA-DMB-262ENST00000498020 SLC39A14Q15043 492 aa9.1□□□□□ -0.95
HLA-DMB-262ENST00000498020 CFAP100Q494V2 611 aa9.1□□□□□ -0.95
HLA-DMB-262ENST00000498020 BRDTQ58F21 947 aaPredicted RBP9.1□□□□□ -0.95
HLA-DMB-262ENST00000498020 MAP1SQ66K74 1059 aaPredicted RBP9.1□□□□□ -0.95
HLA-DMB-262ENST00000498020 PYM1Q9BRP8 204 aaKnown RBP9.1□□□□□ -0.95
HLA-DMB-262ENST00000498020 HOMER2Q9NSB8 354 aa9.1□□□□□ -0.95
HLA-DMB-262ENST00000498020 PNPLA7Q6ZV29 1317 aa9.1□□□□□ -0.95
HLA-DMB-262ENST00000498020 TSPY3P0CV98 308 aa9.1□□□□□ -0.95
HLA-DMB-262ENST00000498020 TSPY8P0CW00 308 aa9.1□□□□□ -0.95
HLA-DMB-262ENST00000498020 PLCG2P16885 1265 aa9.1□□□□□ -0.95
HLA-DMB-262ENST00000498020 FGFR2P21802 821 aa9.1□□□□□ -0.95
HLA-DMB-262ENST00000498020 KRT2P35908 639 aa9.1□□□□□ -0.95
HLA-DMB-262ENST00000498020 CERS3Q8IU89 383 aa9.1□□□□□ -0.95
HLA-DMB-262ENST00000498020 STAG1Q8WVM7 1258 aa9.1□□□□□ -0.95
HLA-DMB-262ENST00000498020 FTOQ9C0B1 505 aaKnown RBP eCLIP9.1□□□□□ -0.95
HLA-DMB-262ENST00000498020 SCAF8Q9UPN6 1271 aaKnown RBP9.1□□□□□ -0.95
HLA-DMB-262ENST00000498020 CLIC4Q9Y696 253 aa9.1□□□□□ -0.95
HLA-DMB-262ENST00000498020 PHLPP1O60346 1717 aa9.1□□□□□ -0.95
HLA-DMB-262ENST00000498020 USP17L12C9JPN9 530 aa9.1□□□□□ -0.95
HLA-DMB-262ENST00000498020 USP17L21D6R901 530 aa9.1□□□□□ -0.95
HLA-DMB-262ENST00000498020 CTDNEP1O95476 244 aa9.1□□□□□ -0.95
HLA-DMB-262ENST00000498020 USP17L8P0C7I0 530 aa9.1□□□□□ -0.95
HLA-DMB-262ENST00000498020 ADRA2BP18089 450 aa9.1□□□□□ -0.95
HLA-DMB-262ENST00000498020 PTGS1P23219 599 aa9.1□□□□□ -0.95
HLA-DMB-262ENST00000498020 EVCP57679 992 aa9.1□□□□□ -0.95
HLA-DMB-262ENST00000498020 SYCP1Q15431 976 aa9.1□□□□□ -0.95
HLA-DMB-262ENST00000498020 CYB5R4Q7L1T6 521 aa9.1□□□□□ -0.95
HLA-DMB-262ENST00000498020 SGMS1Q86VZ5 419 aa9.1□□□□□ -0.95
HLA-DMB-262ENST00000498020 CAGE1Q8TC20 777 aa9.1□□□□□ -0.95
HLA-DMB-262ENST00000498020 ERCC4Q92889 916 aaPredicted RBP9.1□□□□□ -0.95
HLA-DMB-262ENST00000498020 KIAA1468Q9P260 1216 aa9.1□□□□□ -0.95
HLA-DMB-262ENST00000498020 MYO9BQ13459 2157 aa9.1□□□□□ -0.95
HLA-DMB-262ENST00000498020 TNKSO95271 1327 aa9.1□□□□□ -0.95
HLA-DMB-262ENST00000498020 ATP2B4P23634 1241 aa9.1□□□□□ -0.95
HLA-DMB-262ENST00000498020 ECE1P42892 770 aa9.1□□□□□ -0.95
HLA-DMB-262ENST00000498020 STIM1Q13586 685 aa9.1□□□□□ -0.95
HLA-DMB-262ENST00000498020 TMED8Q6PL24 325 aaPredicted RBP9.1□□□□□ -0.95
HLA-DMB-262ENST00000498020 MIGA2Q7L4E1 593 aa9.1□□□□□ -0.95
HLA-DMB-262ENST00000498020 AATFQ9NY61 560 aaKnown RBP eCLIP9.1□□□□□ -0.95
HLA-DMB-262ENST00000498020 MINPP1Q9UNW1 487 aa9.1□□□□□ -0.95
HLA-DMB-262ENST00000498020 PARP4Q9UKK3 1724 aaKnown RBP9.09□□□□□ -0.95
HLA-DMB-262ENST00000498020 GSG1L2A8MUP6 293 aa9.09□□□□□ -0.95
HLA-DMB-262ENST00000498020 KIF2AO00139 706 aaPredicted RBP9.09□□□□□ -0.95
HLA-DMB-262ENST00000498020 PRDM1O75626 825 aa9.09□□□□□ -0.95
HLA-DMB-262ENST00000498020 CALML3P27482 149 aa9.09□□□□□ -0.95
HLA-DMB-262ENST00000498020 NOSTRINQ8IVI9 506 aa9.09□□□□□ -0.95
HLA-DMB-262ENST00000498020 LUC7LQ9NQ29 371 aaKnown RBP9.09□□□□□ -0.95
HLA-DMB-262ENST00000498020 ZNHIT6Q9NWK9 470 aaKnown RBP9.09□□□□□ -0.95
HLA-DMB-262ENST00000498020 ARPP21Q9UBL0 812 aaPredicted RBP9.09□□□□□ -0.95
HLA-DMB-262ENST00000498020 SCN11AQ9UI33 1791 aa9.09□□□□□ -0.95
HLA-DMB-262ENST00000498020 ZNF804BA4D1E1 1349 aa9.09□□□□□ -0.95
HLA-DMB-262ENST00000498020 CCDC194A0A1B0GVG4 234 aa9.09□□□□□ -0.95
HLA-DMB-262ENST00000498020 PPP6R2O75170 966 aa9.09□□□□□ -0.95
HLA-DMB-262ENST00000498020 IREB2P48200 963 aaKnown RBP9.09□□□□□ -0.95
HLA-DMB-262ENST00000498020 ANTXR2P58335 489 aa9.09□□□□□ -0.95
HLA-DMB-262ENST00000498020 RC3H1Q5TC82 1133 aaKnown RBP9.09□□□□□ -0.95
HLA-DMB-262ENST00000498020 DPP9Q86TI2 863 aa9.09□□□□□ -0.95
HLA-DMB-262ENST00000498020 ZSCAN10Q96SZ4 725 aaPredicted RBP9.09□□□□□ -0.95
HLA-DMB-262ENST00000498020 ATP8A2Q9NTI2 1148 aa9.09□□□□□ -0.95
HLA-DMB-262ENST00000498020 KCNH3Q9ULD8 1083 aa9.09□□□□□ -0.95
HLA-DMB-262ENST00000498020 LMNB1P20700 586 aa9.09□□□□□ -0.95
HLA-DMB-262ENST00000498020 RCAN1P53805 252 aa9.09□□□□□ -0.95
HLA-DMB-262ENST00000498020 NLRP12P59046 1061 aa9.09□□□□□ -0.95
HLA-DMB-262ENST00000498020 PRAMEF18Q5VWM3 479 aa9.09□□□□□ -0.95
HLA-DMB-262ENST00000498020 ISM2Q6H9L7 571 aa9.09□□□□□ -0.95
HLA-DMB-262ENST00000498020 NSMFQ6X4W1 530 aa9.09□□□□□ -0.95
HLA-DMB-262ENST00000498020 VGLL2Q8N8G2 317 aa9.09□□□□□ -0.95
HLA-DMB-262ENST00000498020 AK9Q5TCS8 1911 aa9.09□□□□□ -0.95
HLA-DMB-262ENST00000498020 NEDD4P46934 1319 aa9.09□□□□□ -0.95
HLA-DMB-262ENST00000498020 PFKFB1P16118 471 aa9.09□□□□□ -0.96
HLA-DMB-262ENST00000498020 TBC1D9BQ66K14 1250 aa9.09□□□□□ -0.96
HLA-DMB-262ENST00000498020 CCDC150Q8NCX0 1101 aa9.09□□□□□ -0.96
HLA-DMB-262ENST00000498020 RGS22Q8NE09 1264 aa9.09□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms