RNA–Protein interactions for RNA: ENST00000491332.1

NCSTN-213, Transcript of nicastrin, humanhuman

TSL 3

Gene NCSTN, Length 490 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCSTN-213ENST00000491332 MAP7Q14244 749 aa8.39□□□□□ -1.07
NCSTN-213ENST00000491332 NFE2L2Q16236 605 aa8.39□□□□□ -1.07
NCSTN-213ENST00000491332 GIMAP6Q6P9H5 292 aa8.39□□□□□ -1.07
NCSTN-213ENST00000491332 C6orf15Q6UXA7 325 aaPredicted RBP8.39□□□□□ -1.07
NCSTN-213ENST00000491332 NOP9Q86U38 636 aaKnown RBP8.39□□□□□ -1.07
NCSTN-213ENST00000491332 XAGE3Q8WTP9 111 aa8.39□□□□□ -1.07
NCSTN-213ENST00000491332 SNTG2Q9NY99 539 aa8.39□□□□□ -1.07
NCSTN-213ENST00000491332 FAM95CA0A1B0GW59 222 aa8.38□□□□□ -1.07
NCSTN-213ENST00000491332 GJB6O95452 261 aa8.38□□□□□ -1.07
NCSTN-213ENST00000491332 TMEM192Q8IY95 271 aa8.38□□□□□ -1.07
NCSTN-213ENST00000491332 DNAJB8Q8NHS0 232 aa8.38□□□□□ -1.07
NCSTN-213ENST00000491332 DEPDC7Q96QD5 511 aa8.38□□□□□ -1.07
NCSTN-213ENST00000491332 KCNF1Q9H3M0 494 aa8.38□□□□□ -1.07
NCSTN-213ENST00000491332 PHAXQ9H814 394 aaKnown RBP8.38□□□□□ -1.07
NCSTN-213ENST00000491332 C1GALT1Q9NS00 363 aa8.38□□□□□ -1.07
NCSTN-213ENST00000491332 FAM221BA6H8Z2 402 aa8.37□□□□□ -1.07
NCSTN-213ENST00000491332 SLITRK5O94991 958 aa8.37□□□□□ -1.07
NCSTN-213ENST00000491332 CDK5R2Q13319 367 aa8.37□□□□□ -1.07
NCSTN-213ENST00000491332 FAM178BQ8IXR5 827 aa8.37□□□□□ -1.07
NCSTN-213ENST00000491332 KLHL6Q8WZ60 621 aa8.37□□□□□ -1.07
NCSTN-213ENST00000491332 SLC6A18Q96N87 628 aa8.37□□□□□ -1.07
NCSTN-213ENST00000491332 SRPK1Q96SB4 655 aaKnown RBP8.37□□□□□ -1.07
NCSTN-213ENST00000491332 MIPEPQ99797 713 aa8.37□□□□□ -1.07
NCSTN-213ENST00000491332 CCDC113Q9H0I3 377 aa8.37□□□□□ -1.07
NCSTN-213ENST00000491332 ZNF214Q9UL59 606 aaPredicted RBP8.37□□□□□ -1.07
NCSTN-213ENST00000491332 PCDHB10Q9UN67 800 aa8.37□□□□□ -1.07
NCSTN-213ENST00000491332 DHX15O43143 795 aaKnown RBP8.36□□□□□ -1.07
NCSTN-213ENST00000491332 DDAH1O94760 285 aa8.36□□□□□ -1.07
NCSTN-213ENST00000491332 GBP1P32455 592 aa8.36□□□□□ -1.07
NCSTN-213ENST00000491332 KCNMA1Q12791 1236 aa8.36□□□□□ -1.07
NCSTN-213ENST00000491332 NFKBIBQ15653 356 aa8.36□□□□□ -1.07
NCSTN-213ENST00000491332 MRM1Q6IN84 353 aaKnown RBP8.36□□□□□ -1.07
NCSTN-213ENST00000491332 LETMD1Q6P1Q0 360 aa8.36□□□□□ -1.07
NCSTN-213ENST00000491332 VHLLQ6RSH7 139 aa8.36□□□□□ -1.07
NCSTN-213ENST00000491332 BEND4Q6ZU67 534 aa8.36□□□□□ -1.07
NCSTN-213ENST00000491332 LRP10Q7Z4F1 713 aa8.36□□□□□ -1.07
NCSTN-213ENST00000491332 RIN3Q8TB24 985 aa8.36□□□□□ -1.07
NCSTN-213ENST00000491332 MRFAP1L1Q96HT8 127 aa8.36□□□□□ -1.07
NCSTN-213ENST00000491332 PRDM10Q9NQV6 1147 aa8.36□□□□□ -1.07
NCSTN-213ENST00000491332 SUCOQ9UBS9 1254 aaKnown RBP8.36□□□□□ -1.07
NCSTN-213ENST00000491332 COL17A1Q9UMD9 1497 aaPredicted RBP8.36□□□□□ -1.07
NCSTN-213ENST00000491332 CCDC85CA6NKD9 419 aa8.35□□□□□ -1.07
NCSTN-213ENST00000491332 PMS1P54277 932 aaKnown RBP8.35□□□□□ -1.07
NCSTN-213ENST00000491332 RASSF7Q02833 373 aa8.35□□□□□ -1.07
NCSTN-213ENST00000491332 ZNF746Q6NUN9 644 aaPredicted RBP8.35□□□□□ -1.07
NCSTN-213ENST00000491332 PAOXQ6QHF9 649 aa8.35□□□□□ -1.07
NCSTN-213ENST00000491332 PPFIBP1Q86W92 1011 aa8.35□□□□□ -1.07
NCSTN-213ENST00000491332 CLEC10AQ8IUN9 316 aa8.35□□□□□ -1.07
NCSTN-213ENST00000491332 FAM83CQ9BQN1 747 aa8.35□□□□□ -1.07
NCSTN-213ENST00000491332 CEP131Q9UPN4 1083 aa8.35□□□□□ -1.07
NCSTN-213ENST00000491332 ITGB2P05107 769 aa8.34□□□□□ -1.07
NCSTN-213ENST00000491332 GATA4P43694 442 aa8.34□□□□□ -1.07
NCSTN-213ENST00000491332 SLC7A5Q01650 507 aa8.34□□□□□ -1.07
NCSTN-213ENST00000491332 TOP6BLQ8N6T0 577 aa8.34□□□□□ -1.07
NCSTN-213ENST00000491332 DHRS1Q96LJ7 313 aa8.34□□□□□ -1.07
NCSTN-213ENST00000491332 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.34□□□□□ -1.07
NCSTN-213ENST00000491332 C9IYK1 514 aa8.33□□□□□ -1.08
NCSTN-213ENST00000491332 PDPK1O15530 556 aa8.33□□□□□ -1.08
NCSTN-213ENST00000491332 SMARCA5O60264 1052 aaPredicted RBP8.33□□□□□ -1.08
NCSTN-213ENST00000491332 CLEC3AO75596 197 aa8.33□□□□□ -1.08
NCSTN-213ENST00000491332 RASGRF1Q13972 1273 aa8.33□□□□□ -1.08
NCSTN-213ENST00000491332 NCAPHQ15003 741 aa8.33□□□□□ -1.08
NCSTN-213ENST00000491332 GNPTABQ3T906 1256 aa8.33□□□□□ -1.08
NCSTN-213ENST00000491332 TDRD10Q5VZ19 366 aaKnown RBP8.33□□□□□ -1.08
NCSTN-213ENST00000491332 CDH24Q86UP0 819 aa8.33□□□□□ -1.08
NCSTN-213ENST00000491332 GATA6Q92908 595 aa8.33□□□□□ -1.08
NCSTN-213ENST00000491332 TP53INP1Q96A56 240 aa8.33□□□□□ -1.08
NCSTN-213ENST00000491332 VWCEQ96DN2 955 aa8.33□□□□□ -1.08
NCSTN-213ENST00000491332 TBX22Q9Y458 520 aa8.33□□□□□ -1.08
NCSTN-213ENST00000491332 HMX2A2RU54 273 aa8.32□□□□□ -1.08
NCSTN-213ENST00000491332 LEFTY1O75610 366 aa8.32□□□□□ -1.08
NCSTN-213ENST00000491332 BBS9Q3SYG4 887 aa8.32□□□□□ -1.08
NCSTN-213ENST00000491332 KIAA1211LQ6NV74 962 aa8.32□□□□□ -1.08
NCSTN-213ENST00000491332 JAZF1Q86VZ6 243 aa8.32□□□□□ -1.08
NCSTN-213ENST00000491332 ZNF512BQ96KM6 892 aaPredicted RBP8.32□□□□□ -1.08
NCSTN-213ENST00000491332 KREMEN1Q96MU8 473 aa8.32□□□□□ -1.08
NCSTN-213ENST00000491332 DUSP23Q9BVJ7 150 aa8.32□□□□□ -1.08
NCSTN-213ENST00000491332 C7orf69Q9H7B7 122 aa8.32□□□□□ -1.08
NCSTN-213ENST00000491332 RAXQ9Y2V3 346 aa8.32□□□□□ -1.08
NCSTN-213ENST00000491332 RBAK-RBAKDNI3L0D1 243 aa8.31□□□□□ -1.08
NCSTN-213ENST00000491332 EOMESO95936 686 aa8.31□□□□□ -1.08
NCSTN-213ENST00000491332 ADMP35318 185 aa8.31□□□□□ -1.08
NCSTN-213ENST00000491332 PLA2G4EQ3MJ16 856 aa8.31□□□□□ -1.08
NCSTN-213ENST00000491332 FAM86C1Q9NVL1 165 aa8.31□□□□□ -1.08
NCSTN-213ENST00000491332 CNTNAP4Q9C0A0 1308 aa8.3□□□□□ -1.08
NCSTN-213ENST00000491332 TLDC2A0PJX2 215 aa8.3□□□□□ -1.08
NCSTN-213ENST00000491332 FAM87AP0C7U9 286 aa8.3□□□□□ -1.08
NCSTN-213ENST00000491332 ETV3P41162 512 aa8.3□□□□□ -1.08
NCSTN-213ENST00000491332 AXDND1Q5T1B0 1012 aaPredicted RBP8.3□□□□□ -1.08
NCSTN-213ENST00000491332 NBPF12Q5TAG4 269 aaPredicted RBP8.3□□□□□ -1.08
NCSTN-213ENST00000491332 PRR23CQ6ZRP0 262 aa8.3□□□□□ -1.08
NCSTN-213ENST00000491332 SHISA5Q8N114 240 aa8.3□□□□□ -1.08
NCSTN-213ENST00000491332 SMARCC1Q92922 1105 aaPredicted RBP8.3□□□□□ -1.08
NCSTN-213ENST00000491332 TPSG1Q9NRR2 321 aa8.3□□□□□ -1.08
NCSTN-213ENST00000491332 STOML1Q9UBI4 398 aa8.3□□□□□ -1.08
NCSTN-213ENST00000491332 TMA7Q9Y2S6 64 aaKnown RBP8.3□□□□□ -1.08
NCSTN-213ENST00000491332 SUSD5O60279 629 aa8.29□□□□□ -1.08
NCSTN-213ENST00000491332 TP53P04637 393 aaPredicted RBP8.29□□□□□ -1.08
NCSTN-213ENST00000491332 IFRD2Q12894 506 aaPredicted RBP8.29□□□□□ -1.08
NCSTN-213ENST00000491332 FAM214BQ7L5A3 538 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms