RNA–Protein interactions for RNA: ENST00000491332.1

NCSTN-213, Transcript of nicastrin, humanhuman

TSL 3

Gene NCSTN, Length 490 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCSTN-213ENST00000491332 AEBP2Q6ZN18 517 aaPredicted RBP25.47■■□□□ 1.67
NCSTN-213ENST00000491332 CHIC1Q5VXU3 224 aa25.27■■□□□ 1.64
NCSTN-213ENST00000491332 PHF23Q9BUL5 403 aaPredicted RBP22.31■■□□□ 1.16
NCSTN-213ENST00000491332 SENP3Q9H4L4 574 aaPredicted RBP21.48■■□□□ 1.03
NCSTN-213ENST00000491332 PLPPR3Q6T4P5 718 aa20.69■□□□□ 0.9
NCSTN-213ENST00000491332 FOXD1Q16676 465 aa19.92■□□□□ 0.78
NCSTN-213ENST00000491332 ADRA2BP18089 450 aa19.52■□□□□ 0.72
NCSTN-213ENST00000491332 PPP6R1Q9UPN7 881 aa19.52■□□□□ 0.72
NCSTN-213ENST00000491332 PIAS4Q8N2W9 510 aaPredicted RBP18.87■□□□□ 0.61
NCSTN-213ENST00000491332 KCNA4P22459 653 aa18.4■□□□□ 0.54
NCSTN-213ENST00000491332 PPP4R3CPQ6ZMV5 832 aa18.31■□□□□ 0.52
NCSTN-213ENST00000491332 MSH5O43196 834 aa18.15■□□□□ 0.5
NCSTN-213ENST00000491332 NCBP3Q53F19 620 aaKnown RBP17.91■□□□□ 0.46
NCSTN-213ENST00000491332 SCAF1Q9H7N4 1312 aaKnown RBP17.79■□□□□ 0.44
NCSTN-213ENST00000491332 NPM3O75607 178 aaKnown RBP17.71■□□□□ 0.43
NCSTN-213ENST00000491332 CNKSR2Q8WXI2 1034 aa17.69■□□□□ 0.42
NCSTN-213ENST00000491332 EHMT2Q96KQ7 1210 aa17.59■□□□□ 0.41
NCSTN-213ENST00000491332 MAPK8IP2Q13387 824 aaPredicted RBP17.58■□□□□ 0.4
NCSTN-213ENST00000491332 SLC4A1APQ9BWU0 796 aaKnown RBP17.57■□□□□ 0.4
NCSTN-213ENST00000491332 DMRT2Q9Y5R5 561 aa17.24■□□□□ 0.35
NCSTN-213ENST00000491332 RNF216Q9NWF9 866 aaPredicted RBP17.23■□□□□ 0.35
NCSTN-213ENST00000491332 CSRNP3Q8WYN3 585 aa17.21■□□□□ 0.35
NCSTN-213ENST00000491332 DNAJC5BQ9UF47 199 aa17.14■□□□□ 0.33
NCSTN-213ENST00000491332 HOXD11P31277 338 aaPredicted RBP17.07■□□□□ 0.32
NCSTN-213ENST00000491332 ZBTB22O15209 634 aa16.97■□□□□ 0.31
NCSTN-213ENST00000491332 FOXD4L1Q9NU39 408 aa16.79■□□□□ 0.28
NCSTN-213ENST00000491332 SLC4A2P04920 1241 aa16.63■□□□□ 0.25
NCSTN-213ENST00000491332 DCAF8L1A6NGE4 600 aa16.42■□□□□ 0.22
NCSTN-213ENST00000491332 MYCNP04198 464 aaPredicted RBP16.33■□□□□ 0.2
NCSTN-213ENST00000491332 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.21■□□□□ 0.19
NCSTN-213ENST00000491332 ATXN8OSP0DMR3 200 aa16.16■□□□□ 0.18
NCSTN-213ENST00000491332 U3KPZ7 1027 aaPredicted RBP16.07■□□□□ 0.16
NCSTN-213ENST00000491332 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.94■□□□□ 0.14
NCSTN-213ENST00000491332 HNRNPUL2Q1KMD3 747 aaKnown RBP15.94■□□□□ 0.14
NCSTN-213ENST00000491332 SAMD1Q6SPF0 538 aaPredicted RBP15.91■□□□□ 0.14
NCSTN-213ENST00000491332 ATF5Q9Y2D1 282 aaPredicted RBP15.9■□□□□ 0.14
NCSTN-213ENST00000491332 POTEDQ86YR6 584 aa15.79■□□□□ 0.12
NCSTN-213ENST00000491332 APLP2Q06481 763 aa15.66■□□□□ 0.1
NCSTN-213ENST00000491332 RNF39Q9H2S5 420 aa15.63■□□□□ 0.09
NCSTN-213ENST00000491332 ZNF219Q9P2Y4 722 aaPredicted RBP15.57■□□□□ 0.08
NCSTN-213ENST00000491332 FKBP8Q14318 412 aa15.5■□□□□ 0.07
NCSTN-213ENST00000491332 SPINK5Q9NQ38 1064 aaPredicted RBP15.48■□□□□ 0.07
NCSTN-213ENST00000491332 C1QBPQ07021 282 aaKnown RBP15.43■□□□□ 0.06
NCSTN-213ENST00000491332 TRHP20396 242 aaPredicted RBP15.39■□□□□ 0.05
NCSTN-213ENST00000491332 CAPN15O75808 1086 aa15.35■□□□□ 0.05
NCSTN-213ENST00000491332 POLA2Q14181 598 aa15.25■□□□□ 0.03
NCSTN-213ENST00000491332 MKRN4PQ13434 485 aaPredicted RBP15.24■□□□□ 0.03
NCSTN-213ENST00000491332 ABCB7O75027 752 aa15.13■□□□□ 0.01
NCSTN-213ENST00000491332 FBLN2P98095 1184 aa15.13■□□□□ 0.01
NCSTN-213ENST00000491332 SPDYE4A6NLX3 237 aa15.06■□□□□ 0
NCSTN-213ENST00000491332 DSG3P32926 999 aa15.02■□□□□ -0
NCSTN-213ENST00000491332 ZBTB12Q9Y330 459 aaPredicted RBP15□□□□□ -0.01
NCSTN-213ENST00000491332 PROM2Q8N271 834 aa14.92□□□□□ -0.02
NCSTN-213ENST00000491332 RTN4Q9NQC3 1192 aaKnown RBP14.9□□□□□ -0.02
NCSTN-213ENST00000491332 AMER1Q5JTC6 1135 aaPredicted RBP14.89□□□□□ -0.03
NCSTN-213ENST00000491332 CACNB1Q02641 598 aaPredicted RBP14.86□□□□□ -0.03
NCSTN-213ENST00000491332 FBXO3Q9UK99 471 aa14.8□□□□□ -0.04
NCSTN-213ENST00000491332 OSCARQ8IYS5 282 aa14.73□□□□□ -0.05
NCSTN-213ENST00000491332 SPDYE2BA6NHP3 402 aa14.66□□□□□ -0.06
NCSTN-213ENST00000491332 SPDYE6P0CI01 402 aa14.66□□□□□ -0.06
NCSTN-213ENST00000491332 SPDYE2Q495Y8 402 aa14.66□□□□□ -0.06
NCSTN-213ENST00000491332 ZNF692Q9BU19 519 aaPredicted RBP14.66□□□□□ -0.06
NCSTN-213ENST00000491332 VASPP50552 380 aaPredicted RBP14.63□□□□□ -0.07
NCSTN-213ENST00000491332 SSUH2Q9Y2M2 353 aa14.62□□□□□ -0.07
NCSTN-213ENST00000491332 PABPN1Q86U42 306 aaKnown RBP eCLIP14.49□□□□□ -0.09
NCSTN-213ENST00000491332 IFNLR1Q8IU57 520 aaPredicted RBP14.47□□□□□ -0.09
NCSTN-213ENST00000491332 STAG3Q9UJ98 1225 aa14.39□□□□□ -0.11
NCSTN-213ENST00000491332 RBM42Q9BTD8 480 aaKnown RBP14.26□□□□□ -0.13
NCSTN-213ENST00000491332 PLCD3Q8N3E9 789 aa14.24□□□□□ -0.13
NCSTN-213ENST00000491332 KLHL34Q8N239 644 aa14.23□□□□□ -0.13
NCSTN-213ENST00000491332 MIER1Q8N108 512 aa14.21□□□□□ -0.13
NCSTN-213ENST00000491332 SPOCK2Q92563 424 aa14.2□□□□□ -0.14
NCSTN-213ENST00000491332 AKT1S1Q96B36 256 aa14.2□□□□□ -0.14
NCSTN-213ENST00000491332 PKD2Q13563 968 aa14.17□□□□□ -0.14
NCSTN-213ENST00000491332 SLC24A1O60721 1099 aa14.16□□□□□ -0.14
NCSTN-213ENST00000491332 SPDYE1Q8NFV5 336 aaPredicted RBP14.11□□□□□ -0.15
NCSTN-213ENST00000491332 REM2Q8IYK8 340 aaPredicted RBP14.07□□□□□ -0.16
NCSTN-213ENST00000491332 PLEKHG5O94827 1062 aa14.06□□□□□ -0.16
NCSTN-213ENST00000491332 ZBTB47Q9UFB7 747 aaPredicted RBP14.04□□□□□ -0.16
NCSTN-213ENST00000491332 CLEC11AQ9Y240 323 aa14.02□□□□□ -0.17
NCSTN-213ENST00000491332 ECM2O94769 699 aaPredicted RBP13.96□□□□□ -0.17
NCSTN-213ENST00000491332 PRR29P0C7W0 189 aa13.95□□□□□ -0.18
NCSTN-213ENST00000491332 DCAF8L2P0C7V8 631 aa13.94□□□□□ -0.18
NCSTN-213ENST00000491332 PITPNM1O00562 1244 aa13.93□□□□□ -0.18
NCSTN-213ENST00000491332 CREBZFQ9NS37 354 aa13.93□□□□□ -0.18
NCSTN-213ENST00000491332 CIZ1Q9ULV3 898 aaPredicted RBP13.88□□□□□ -0.19
NCSTN-213ENST00000491332 MNX1P50219 401 aaPredicted RBP13.86□□□□□ -0.19
NCSTN-213ENST00000491332 RGL2O15211 777 aa13.85□□□□□ -0.19
NCSTN-213ENST00000491332 NUBP1P53384 320 aa13.85□□□□□ -0.19
NCSTN-213ENST00000491332 PLCB2Q00722 1185 aa13.78□□□□□ -0.2
NCSTN-213ENST00000491332 GSE1Q14687 1217 aa13.77□□□□□ -0.21
NCSTN-213ENST00000491332 TRIM41Q8WV44 630 aa13.77□□□□□ -0.21
NCSTN-213ENST00000491332 NPM1P06748 294 aaKnown RBP eCLIP13.73□□□□□ -0.21
NCSTN-213ENST00000491332 DCAF8Q5TAQ9 597 aa13.71□□□□□ -0.21
NCSTN-213ENST00000491332 RASEFQ8IZ41 740 aa13.69□□□□□ -0.22
NCSTN-213ENST00000491332 FAM212AQ96EL1 285 aa13.69□□□□□ -0.22
NCSTN-213ENST00000491332 CHADLQ6NUI6 762 aa13.67□□□□□ -0.22
NCSTN-213ENST00000491332 BBXQ8WY36 941 aaPredicted RBP13.66□□□□□ -0.22
NCSTN-213ENST00000491332 RNF25Q96BH1 459 aaPredicted RBP13.66□□□□□ -0.22
NCSTN-213ENST00000491332 CHGAP10645 457 aaKnown RBP13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms