RNA–Protein interactions for RNA: ENST00000420453.1

LINC00993-201, long intergenic non-protein coding RNA 993, humanhuman

BASIC

Gene LINC00993, Length 540 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00993-201ENST00000420453 AKAP2Q9Y2D5 859 aa6.65□□□□□ -1.34
LINC00993-201ENST00000420453 ANKRD36BQ8N2N9 1353 aa6.65□□□□□ -1.35
LINC00993-201ENST00000420453 STRCP1A6NGW2 1772 aa6.64□□□□□ -1.35
LINC00993-201ENST00000420453 A0A096LPE4 126 aa6.64□□□□□ -1.35
LINC00993-201ENST00000420453 A0A1W2PPZ6 126 aa6.64□□□□□ -1.35
LINC00993-201ENST00000420453 F6X3S4 739 aa6.64□□□□□ -1.35
LINC00993-201ENST00000420453 GRIK1P39086 918 aa6.64□□□□□ -1.35
LINC00993-201ENST00000420453 NFIAQ12857 509 aa6.64□□□□□ -1.35
LINC00993-201ENST00000420453 ZNF423Q2M1K9 1284 aa6.64□□□□□ -1.35
LINC00993-201ENST00000420453 UBASH3BQ8TF42 649 aa6.64□□□□□ -1.35
LINC00993-201ENST00000420453 SLC7A3Q8WY07 619 aa6.64□□□□□ -1.35
LINC00993-201ENST00000420453 MYRFLQ96LU7 910 aa6.64□□□□□ -1.35
LINC00993-201ENST00000420453 RNF208Q9H0X6 261 aa6.64□□□□□ -1.35
LINC00993-201ENST00000420453 TERF2IPQ9NYB0 399 aa6.64□□□□□ -1.35
LINC00993-201ENST00000420453 PRR36Q9H6K5 1346 aa6.64□□□□□ -1.35
LINC00993-201ENST00000420453 IQSEC2Q5JU85 1478 aa6.64□□□□□ -1.35
LINC00993-201ENST00000420453 NALCNQ8IZF0 1738 aa6.64□□□□□ -1.35
LINC00993-201ENST00000420453 POLR3AO14802 1390 aaPredicted RBP6.63□□□□□ -1.35
LINC00993-201ENST00000420453 TM4SF5O14894 197 aa6.63□□□□□ -1.35
LINC00993-201ENST00000420453 BRD4O60885 1362 aaPredicted RBP6.63□□□□□ -1.35
LINC00993-201ENST00000420453 ATF3P18847 181 aa6.63□□□□□ -1.35
LINC00993-201ENST00000420453 CD97P48960 835 aa6.63□□□□□ -1.35
LINC00993-201ENST00000420453 NLRP12P59046 1061 aa6.63□□□□□ -1.35
LINC00993-201ENST00000420453 HDLBPQ00341 1268 aaKnown RBP6.63□□□□□ -1.35
LINC00993-201ENST00000420453 MST1RQ04912 1400 aa6.63□□□□□ -1.35
LINC00993-201ENST00000420453 CPSF1Q10570 1443 aaKnown RBP6.63□□□□□ -1.35
LINC00993-201ENST00000420453 DDX10Q13206 875 aaKnown RBP6.63□□□□□ -1.35
LINC00993-201ENST00000420453 RNF43Q68DV7 783 aa6.63□□□□□ -1.35
LINC00993-201ENST00000420453 PRPF40BQ6NWY9 871 aaKnown RBP6.63□□□□□ -1.35
LINC00993-201ENST00000420453 FDX2Q6P4F2 183 aa6.63□□□□□ -1.35
LINC00993-201ENST00000420453 PPIP5K1Q6PFW1 1433 aa6.63□□□□□ -1.35
LINC00993-201ENST00000420453 VN1R5Q7Z5H4 357 aa6.63□□□□□ -1.35
LINC00993-201ENST00000420453 CLEC10AQ8IUN9 316 aa6.63□□□□□ -1.35
LINC00993-201ENST00000420453 TRIM42Q8IWZ5 723 aa6.63□□□□□ -1.35
LINC00993-201ENST00000420453 KRTAP9-2Q9BYQ4 174 aa6.63□□□□□ -1.35
LINC00993-201ENST00000420453 BHLHE41Q9C0J9 482 aaPredicted RBP6.63□□□□□ -1.35
LINC00993-201ENST00000420453 SLC12A5Q9H2X9 1139 aa6.63□□□□□ -1.35
LINC00993-201ENST00000420453 KCNF1Q9H3M0 494 aa6.63□□□□□ -1.35
LINC00993-201ENST00000420453 C7orf69Q9H7B7 122 aa6.63□□□□□ -1.35
LINC00993-201ENST00000420453 NPC1L1Q9UHC9 1359 aa6.63□□□□□ -1.35
LINC00993-201ENST00000420453 FMN2Q9NZ56 1722 aa6.62□□□□□ -1.35
LINC00993-201ENST00000420453 MYOM1P52179 1685 aa6.62□□□□□ -1.35
LINC00993-201ENST00000420453 C1orf167Q5SNV9 1468 aa6.62□□□□□ -1.35
LINC00993-201ENST00000420453 CD163L1Q9NR16 1453 aa6.62□□□□□ -1.35
LINC00993-201ENST00000420453 USP31Q70CQ4 1352 aa6.62□□□□□ -1.35
LINC00993-201ENST00000420453 ADAM11O75078 769 aa6.62□□□□□ -1.35
LINC00993-201ENST00000420453 TGFB1P01137 390 aa6.62□□□□□ -1.35
LINC00993-201ENST00000420453 FANCCQ00597 558 aa6.62□□□□□ -1.35
LINC00993-201ENST00000420453 C19orf57Q0VDD7 668 aa6.62□□□□□ -1.35
LINC00993-201ENST00000420453 INTS5Q6P9B9 1019 aaKnown RBP6.62□□□□□ -1.35
LINC00993-201ENST00000420453 DTHD1Q6ZMT9 781 aa6.62□□□□□ -1.35
LINC00993-201ENST00000420453 HDGFL2Q7Z4V5 671 aaPredicted RBP6.62□□□□□ -1.35
LINC00993-201ENST00000420453 METTL16Q86W50 562 aaKnown RBP6.62□□□□□ -1.35
LINC00993-201ENST00000420453 FRMD6Q96NE9 622 aa6.62□□□□□ -1.35
LINC00993-201ENST00000420453 DBNDD2Q9BQY9 259 aa6.62□□□□□ -1.35
LINC00993-201ENST00000420453 POLR3GLQ9BT43 218 aa6.62□□□□□ -1.35
LINC00993-201ENST00000420453 RUSC1Q9BVN2 902 aa6.62□□□□□ -1.35
LINC00993-201ENST00000420453 PANK3Q9H999 370 aa6.62□□□□□ -1.35
LINC00993-201ENST00000420453 FAM8A1Q9UBU6 413 aa6.62□□□□□ -1.35
LINC00993-201ENST00000420453 TOPAZ1Q8N9V7 1692 aa6.61□□□□□ -1.35
LINC00993-201ENST00000420453 USP32Q8NFA0 1604 aa6.61□□□□□ -1.35
LINC00993-201ENST00000420453 EDC4Q6P2E9 1401 aaKnown RBP6.61□□□□□ -1.35
LINC00993-201ENST00000420453 A0A1W2PP64 1363 aa6.61□□□□□ -1.35
LINC00993-201ENST00000420453 HMX2A2RU54 273 aa6.61□□□□□ -1.35
LINC00993-201ENST00000420453 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.61□□□□□ -1.35
LINC00993-201ENST00000420453 SOX1O00570 391 aaPredicted RBP6.61□□□□□ -1.35
LINC00993-201ENST00000420453 GIPC1O14908 333 aa6.61□□□□□ -1.35
LINC00993-201ENST00000420453 GAS2O43903 313 aaKnown RBP6.61□□□□□ -1.35
LINC00993-201ENST00000420453 BMP3P12645 472 aa6.61□□□□□ -1.35
LINC00993-201ENST00000420453 FGD1P98174 961 aa6.61□□□□□ -1.35
LINC00993-201ENST00000420453 DIEXFQ68CQ4 756 aaKnown RBP6.61□□□□□ -1.35
LINC00993-201ENST00000420453 TPTE2Q6XPS3 522 aa6.61□□□□□ -1.35
LINC00993-201ENST00000420453 BEND4Q6ZU67 534 aa6.61□□□□□ -1.35
LINC00993-201ENST00000420453 ZDHHC13Q8IUH4 622 aa6.61□□□□□ -1.35
LINC00993-201ENST00000420453 FAM20CQ8IXL6 584 aa6.61□□□□□ -1.35
LINC00993-201ENST00000420453 BSNDQ8WZ55 320 aa6.61□□□□□ -1.35
LINC00993-201ENST00000420453 FAM83CQ9BQN1 747 aa6.61□□□□□ -1.35
LINC00993-201ENST00000420453 COPRSQ9NQ92 184 aa6.61□□□□□ -1.35
LINC00993-201ENST00000420453 SOX13Q9UN79 622 aa6.61□□□□□ -1.35
LINC00993-201ENST00000420453 HIF3AQ9Y2N7 669 aa6.61□□□□□ -1.35
LINC00993-201ENST00000420453 KNSTRNQ9Y448 316 aa6.61□□□□□ -1.35
LINC00993-201ENST00000420453 USP6P35125 1406 aa6.6□□□□□ -1.35
LINC00993-201ENST00000420453 NSD2O96028 1365 aa6.6□□□□□ -1.35
LINC00993-201ENST00000420453 KTN1Q86UP2 1357 aaKnown RBP6.6□□□□□ -1.35
LINC00993-201ENST00000420453 ACEP12821 1306 aa6.6□□□□□ -1.35
LINC00993-201ENST00000420453 CGNL1Q0VF96 1302 aa6.6□□□□□ -1.35
LINC00993-201ENST00000420453 PAGE1O75459 146 aa6.6□□□□□ -1.35
LINC00993-201ENST00000420453 ITPKAP23677 461 aa6.6□□□□□ -1.35
LINC00993-201ENST00000420453 IKBKEQ14164 716 aa6.6□□□□□ -1.35
LINC00993-201ENST00000420453 TAF1CQ15572 869 aaPredicted RBP6.6□□□□□ -1.35
LINC00993-201ENST00000420453 RASIP1Q5U651 963 aa6.6□□□□□ -1.35
LINC00993-201ENST00000420453 MCTP1Q6DN14 999 aa6.6□□□□□ -1.35
LINC00993-201ENST00000420453 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.6□□□□□ -1.35
LINC00993-201ENST00000420453 STK35Q8TDR2 534 aa6.6□□□□□ -1.35
LINC00993-201ENST00000420453 CRELD1Q96HD1 420 aa6.6□□□□□ -1.35
LINC00993-201ENST00000420453 ZNF576Q9H609 170 aa6.6□□□□□ -1.35
LINC00993-201ENST00000420453 SSH2Q76I76 1423 aa6.59□□□□□ -1.35
LINC00993-201ENST00000420453 NSD3Q9BZ95 1437 aa6.59□□□□□ -1.35
LINC00993-201ENST00000420453 ITSN1Q15811 1721 aa6.59□□□□□ -1.35
LINC00993-201ENST00000420453 TTC21AQ8NDW8 1320 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms