RNA–Protein interactions for RNA: ENST00000407817.3

TCN2-203, Transcript of transcobalamin 2, humanhuman

TSL 1 (best) BASIC

Gene TCN2, Length 1,870 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCN2-203ENST00000407817 ATL3Q6DD88 541 aa13.93□□□□□ -0.18
TCN2-203ENST00000407817 APOBEC3HQ6NTF7 200 aaKnown RBP13.93□□□□□ -0.18
TCN2-203ENST00000407817 BRAPQ7Z569 592 aa13.93□□□□□ -0.18
TCN2-203ENST00000407817 CMTR1Q8N1G2 835 aaKnown RBP13.93□□□□□ -0.18
TCN2-203ENST00000407817 CRACR2BQ8N4Y2 399 aaPredicted RBP13.93□□□□□ -0.18
TCN2-203ENST00000407817 GJB4Q9NTQ9 266 aa13.93□□□□□ -0.18
TCN2-203ENST00000407817 TMEM63CQ9P1W3 806 aa13.93□□□□□ -0.18
TCN2-203ENST00000407817 MRE11P49959 708 aa13.92□□□□□ -0.18
TCN2-203ENST00000407817 KRT40Q6A162 431 aa13.92□□□□□ -0.18
TCN2-203ENST00000407817 RSBN1LQ6PCB5 846 aaPredicted RBP13.92□□□□□ -0.18
TCN2-203ENST00000407817 LEO1Q8WVC0 666 aaPredicted RBP13.92□□□□□ -0.18
TCN2-203ENST00000407817 DDX4Q9NQI0 724 aaKnown RBP13.92□□□□□ -0.18
TCN2-203ENST00000407817 TCP11L1Q9NUJ3 509 aa13.92□□□□□ -0.18
TCN2-203ENST00000407817 SERPINA10Q9UK55 444 aa13.92□□□□□ -0.18
TCN2-203ENST00000407817 PCDHAC2Q9Y5I4 1007 aa13.92□□□□□ -0.18
TCN2-203ENST00000407817 HLA-DOAP06340 250 aa13.91□□□□□ -0.18
TCN2-203ENST00000407817 CEBPZQ03701 1054 aaKnown RBP13.91□□□□□ -0.18
TCN2-203ENST00000407817 RCSD1Q6JBY9 416 aa13.91□□□□□ -0.18
TCN2-203ENST00000407817 NBPF11Q86T75 865 aa13.91□□□□□ -0.18
TCN2-203ENST00000407817 RNF26Q9BY78 433 aaPredicted RBP13.91□□□□□ -0.18
TCN2-203ENST00000407817 OSBPL5Q9H0X9 879 aaPredicted RBP13.91□□□□□ -0.18
TCN2-203ENST00000407817 IL17RBQ9NRM6 502 aa13.91□□□□□ -0.18
TCN2-203ENST00000407817 STX8Q9UNK0 236 aa13.91□□□□□ -0.18
TCN2-203ENST00000407817 MYO3BQ8WXR4 1341 aa13.91□□□□□ -0.18
TCN2-203ENST00000407817 KIF5BP33176 963 aa13.91□□□□□ -0.18
TCN2-203ENST00000407817 KIF23Q02241 960 aaPredicted RBP13.91□□□□□ -0.18
TCN2-203ENST00000407817 GAS2L3Q86XJ1 694 aa13.91□□□□□ -0.18
TCN2-203ENST00000407817 PNMA1Q8ND90 353 aa13.91□□□□□ -0.18
TCN2-203ENST00000407817 SERPINB13Q9UIV8 391 aa13.91□□□□□ -0.18
TCN2-203ENST00000407817 SIPA1L1O43166 1804 aa13.91□□□□□ -0.18
TCN2-203ENST00000407817 FZD9O00144 591 aa13.9□□□□□ -0.18
TCN2-203ENST00000407817 XBP1P17861 261 aa13.9□□□□□ -0.18
TCN2-203ENST00000407817 ZNF445P59923 1031 aa13.9□□□□□ -0.18
TCN2-203ENST00000407817 SAFBQ15424 915 aaKnown RBP eCLIP13.9□□□□□ -0.18
TCN2-203ENST00000407817 NEDD1Q8NHV4 660 aa13.9□□□□□ -0.18
TCN2-203ENST00000407817 ANKS1AQ92625 1134 aa13.9□□□□□ -0.18
TCN2-203ENST00000407817 GRPEL1Q9HAV7 217 aa13.9□□□□□ -0.18
TCN2-203ENST00000407817 ZBTB12Q9Y330 459 aaPredicted RBP13.9□□□□□ -0.18
TCN2-203ENST00000407817 UBE2Q2LH0YL09 131 aa13.89□□□□□ -0.19
TCN2-203ENST00000407817 PLEKHA8P1O95397 391 aa13.89□□□□□ -0.19
TCN2-203ENST00000407817 GUCY1A2P33402 732 aa13.89□□□□□ -0.19
TCN2-203ENST00000407817 ARHGAP27Q6ZUM4 889 aa13.89□□□□□ -0.19
TCN2-203ENST00000407817 TMTC3Q6ZXV5 915 aa13.89□□□□□ -0.19
TCN2-203ENST00000407817 JDP2Q8WYK2 163 aa13.89□□□□□ -0.19
TCN2-203ENST00000407817 USP28Q96RU2 1077 aa13.89□□□□□ -0.19
TCN2-203ENST00000407817 SWAP70Q9UH65 585 aa13.89□□□□□ -0.19
TCN2-203ENST00000407817 KIF28PB7ZC32 967 aa13.89□□□□□ -0.19
TCN2-203ENST00000407817 PRPF3O43395 683 aaKnown RBP13.89□□□□□ -0.19
TCN2-203ENST00000407817 NFIAQ12857 509 aa13.89□□□□□ -0.19
TCN2-203ENST00000407817 MYSM1Q5VVJ2 828 aa13.89□□□□□ -0.19
TCN2-203ENST00000407817 CIAPIN1Q6FI81 312 aa13.89□□□□□ -0.19
TCN2-203ENST00000407817 DHX36Q9H2U1 1008 aaKnown RBP13.89□□□□□ -0.19
TCN2-203ENST00000407817 SYCE3A1L190 88 aa13.88□□□□□ -0.19
TCN2-203ENST00000407817 MMP1P03956 469 aa13.88□□□□□ -0.19
TCN2-203ENST00000407817 CACNB3P54284 484 aa13.88□□□□□ -0.19
TCN2-203ENST00000407817 GABPAQ06546 454 aa13.88□□□□□ -0.19
TCN2-203ENST00000407817 TCP10Q12799 353 aa13.88□□□□□ -0.19
TCN2-203ENST00000407817 CFAP100Q494V2 611 aa13.88□□□□□ -0.19
TCN2-203ENST00000407817 CCDC183Q5T5S1 534 aa13.88□□□□□ -0.19
TCN2-203ENST00000407817 ZSCAN29Q8IWY8 852 aaPredicted RBP13.88□□□□□ -0.19
TCN2-203ENST00000407817 BICD2Q8TD16 824 aa13.88□□□□□ -0.19
TCN2-203ENST00000407817 MAP3K14Q99558 947 aa13.88□□□□□ -0.19
TCN2-203ENST00000407817 TMEM47Q9BQJ4 181 aa13.88□□□□□ -0.19
TCN2-203ENST00000407817 IDI2Q9BXS1 227 aa13.88□□□□□ -0.19
TCN2-203ENST00000407817 FTOQ9C0B1 505 aaKnown RBP eCLIP13.88□□□□□ -0.19
TCN2-203ENST00000407817 RCOR1Q9UKL0 485 aa13.88□□□□□ -0.19
TCN2-203ENST00000407817 HDAC9Q9UKV0 1011 aa13.88□□□□□ -0.19
TCN2-203ENST00000407817 V9GY48 417 aaPredicted RBP13.88□□□□□ -0.19
TCN2-203ENST00000407817 ZNF541Q9H0D2 1346 aa13.88□□□□□ -0.19
TCN2-203ENST00000407817 LMNB1P20700 586 aa13.87□□□□□ -0.19
TCN2-203ENST00000407817 FUT2Q10981 343 aa13.87□□□□□ -0.19
TCN2-203ENST00000407817 OGFOD1Q8N543 542 aa13.87□□□□□ -0.19
TCN2-203ENST00000407817 AGBL3Q8NEM8 1001 aa13.87□□□□□ -0.19
TCN2-203ENST00000407817 MTMR7Q9Y216 660 aa13.87□□□□□ -0.19
TCN2-203ENST00000407817 PLIN4Q96Q06 1357 aa13.87□□□□□ -0.19
TCN2-203ENST00000407817 CNTNAP5Q8WYK1 1306 aa13.87□□□□□ -0.19
TCN2-203ENST00000407817 SHTN1A0MZ66 631 aa13.87□□□□□ -0.19
TCN2-203ENST00000407817 GNAQP50148 359 aa13.87□□□□□ -0.19
TCN2-203ENST00000407817 SRBD1Q8N5C6 995 aaKnown RBP13.87□□□□□ -0.19
TCN2-203ENST00000407817 CEP95Q96GE4 821 aa13.87□□□□□ -0.19
TCN2-203ENST00000407817 TRIM34Q9BYJ4 488 aa13.87□□□□□ -0.19
TCN2-203ENST00000407817 EHD4Q9H223 541 aa13.87□□□□□ -0.19
TCN2-203ENST00000407817 TDRD3Q9H7E2 651 aaKnown RBP13.87□□□□□ -0.19
TCN2-203ENST00000407817 RTEL1Q9NZ71 1219 aa13.87□□□□□ -0.19
TCN2-203ENST00000407817 TMOD2Q9NZR1 351 aa13.87□□□□□ -0.19
TCN2-203ENST00000407817 KCNJ14Q9UNX9 436 aa13.87□□□□□ -0.19
TCN2-203ENST00000407817 NPM3O75607 178 aaKnown RBP13.86□□□□□ -0.19
TCN2-203ENST00000407817 LETM1O95202 739 aaPredicted RBP13.86□□□□□ -0.19
TCN2-203ENST00000407817 TOP1P11387 765 aaKnown RBP13.86□□□□□ -0.19
TCN2-203ENST00000407817 U2AF2P26368 475 aaKnown RBP eCLIP13.86□□□□□ -0.19
TCN2-203ENST00000407817 ME1P48163 572 aa13.86□□□□□ -0.19
TCN2-203ENST00000407817 GRM4Q14833 912 aa13.86□□□□□ -0.19
TCN2-203ENST00000407817 STK38Q15208 465 aa13.86□□□□□ -0.19
TCN2-203ENST00000407817 SF3A1Q15459 793 aaKnown RBP13.86□□□□□ -0.19
TCN2-203ENST00000407817 DIS3L2Q8IYB7 885 aaKnown RBP13.86□□□□□ -0.19
TCN2-203ENST00000407817 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.86□□□□□ -0.19
TCN2-203ENST00000407817 POLR3EQ9NVU0 708 aa13.86□□□□□ -0.19
TCN2-203ENST00000407817 hCG_1642624A0A1W2PR95 340 aa13.85□□□□□ -0.19
TCN2-203ENST00000407817 YEATS4O95619 227 aa13.85□□□□□ -0.19
TCN2-203ENST00000407817 TNIP1Q15025 636 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms