RNA–Protein interactions for RNA: ENST00000403971.2

HMGB3P19-201, Transcript of high mobility group box 3 pseudogene 19, humanhuman

BASIC

Gene HMGB3P19, Length 560 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P19-201ENST00000403971 CYB5D2Q8WUJ1 264 aa7.65□□□□□ -1.18
HMGB3P19-201ENST00000403971 GATA6Q92908 595 aa7.65□□□□□ -1.18
HMGB3P19-201ENST00000403971 SPOCK3Q9BQ16 436 aa7.65□□□□□ -1.18
HMGB3P19-201ENST00000403971 PRDM10Q9NQV6 1147 aa7.65□□□□□ -1.18
HMGB3P19-201ENST00000403971 LTBP3Q9NS15 1303 aa7.64□□□□□ -1.19
HMGB3P19-201ENST00000403971 RGS13O14921 159 aa7.64□□□□□ -1.19
HMGB3P19-201ENST00000403971 TNNI3KQ59H18 835 aa7.64□□□□□ -1.19
HMGB3P19-201ENST00000403971 GPAT2Q6NUI2 795 aa7.64□□□□□ -1.19
HMGB3P19-201ENST00000403971 LETMD1Q6P1Q0 360 aa7.64□□□□□ -1.19
HMGB3P19-201ENST00000403971 CDH24Q86UP0 819 aa7.64□□□□□ -1.19
HMGB3P19-201ENST00000403971 FBXL6Q8N531 539 aa7.64□□□□□ -1.19
HMGB3P19-201ENST00000403971 TAB3Q8N5C8 712 aaPredicted RBP7.64□□□□□ -1.19
HMGB3P19-201ENST00000403971 CCDC74BQ96LY2 380 aa7.64□□□□□ -1.19
HMGB3P19-201ENST00000403971 MFSD14AQ96MC6 490 aa7.64□□□□□ -1.19
HMGB3P19-201ENST00000403971 TBC1D32Q96NH3 1257 aa7.64□□□□□ -1.19
HMGB3P19-201ENST00000403971 DUSP23Q9BVJ7 150 aa7.64□□□□□ -1.19
HMGB3P19-201ENST00000403971 HIRIP3Q9BW71 556 aaPredicted RBP7.64□□□□□ -1.19
HMGB3P19-201ENST00000403971 ACTR10Q9NZ32 417 aa7.64□□□□□ -1.19
HMGB3P19-201ENST00000403971 CNTNAP4Q9C0A0 1308 aa7.63□□□□□ -1.19
HMGB3P19-201ENST00000403971 FAM87AP0C7U9 286 aa7.63□□□□□ -1.19
HMGB3P19-201ENST00000403971 GBP1P32455 592 aa7.63□□□□□ -1.19
HMGB3P19-201ENST00000403971 CASP7P55210 303 aa7.63□□□□□ -1.19
HMGB3P19-201ENST00000403971 LARP1BQ659C4 914 aaKnown RBP7.63□□□□□ -1.19
HMGB3P19-201ENST00000403971 INTS3Q68E01 1043 aaKnown RBP7.63□□□□□ -1.19
HMGB3P19-201ENST00000403971 ZAR1Q86SH2 424 aa7.63□□□□□ -1.19
HMGB3P19-201ENST00000403971 TMEM192Q8IY95 271 aa7.63□□□□□ -1.19
HMGB3P19-201ENST00000403971 CELF2-AS1Q8N7Q2 184 aa7.63□□□□□ -1.19
HMGB3P19-201ENST00000403971 C19orf47Q8N9M1 422 aaKnown RBP7.63□□□□□ -1.19
HMGB3P19-201ENST00000403971 DNAJB8Q8NHS0 232 aa7.63□□□□□ -1.19
HMGB3P19-201ENST00000403971 MICAL1Q8TDZ2 1067 aa7.63□□□□□ -1.19
HMGB3P19-201ENST00000403971 LNPKQ9C0E8 428 aa7.63□□□□□ -1.19
HMGB3P19-201ENST00000403971 ST7Q9NRC1 585 aa7.63□□□□□ -1.19
HMGB3P19-201ENST00000403971 PCDHB10Q9UN67 800 aa7.63□□□□□ -1.19
HMGB3P19-201ENST00000403971 UNC13AQ9UPW8 1703 aa7.62□□□□□ -1.19
HMGB3P19-201ENST00000403971 FAM170BA6NMN3 283 aa7.62□□□□□ -1.19
HMGB3P19-201ENST00000403971 EOMESO95936 686 aa7.62□□□□□ -1.19
HMGB3P19-201ENST00000403971 SLC6A18Q96N87 628 aa7.62□□□□□ -1.19
HMGB3P19-201ENST00000403971 FAM86C1Q9NVL1 165 aa7.62□□□□□ -1.19
HMGB3P19-201ENST00000403971 CEP131Q9UPN4 1083 aa7.62□□□□□ -1.19
HMGB3P19-201ENST00000403971 R3HCC1Q9Y3T6 440 aaKnown RBP7.62□□□□□ -1.19
HMGB3P19-201ENST00000403971 B2RBV5 119 aa7.61□□□□□ -1.19
HMGB3P19-201ENST00000403971 MSTNO14793 375 aa7.61□□□□□ -1.19
HMGB3P19-201ENST00000403971 RAB33AQ14088 237 aa7.61□□□□□ -1.19
HMGB3P19-201ENST00000403971 RSPO4Q2I0M5 234 aaPredicted RBP7.61□□□□□ -1.19
HMGB3P19-201ENST00000403971 NKAPLQ5M9Q1 402 aa7.61□□□□□ -1.19
HMGB3P19-201ENST00000403971 RNF43Q68DV7 783 aa7.61□□□□□ -1.19
HMGB3P19-201ENST00000403971 DPH6Q7L8W6 267 aa7.61□□□□□ -1.19
HMGB3P19-201ENST00000403971 ZNF512BQ96KM6 892 aaPredicted RBP7.61□□□□□ -1.19
HMGB3P19-201ENST00000403971 TRIM55Q9BYV6 548 aa7.61□□□□□ -1.19
HMGB3P19-201ENST00000403971 F13BP05160 661 aa7.6□□□□□ -1.19
HMGB3P19-201ENST00000403971 NFIAQ12857 509 aa7.6□□□□□ -1.19
HMGB3P19-201ENST00000403971 TDRD10Q5VZ19 366 aaKnown RBP7.6□□□□□ -1.19
HMGB3P19-201ENST00000403971 ZNF765Q7L2R6 523 aa7.6□□□□□ -1.19
HMGB3P19-201ENST00000403971 PPFIBP1Q86W92 1011 aa7.6□□□□□ -1.19
HMGB3P19-201ENST00000403971 TPX2Q9ULW0 747 aaKnown RBP7.6□□□□□ -1.19
HMGB3P19-201ENST00000403971 COL17A1Q9UMD9 1497 aaPredicted RBP7.6□□□□□ -1.19
HMGB3P19-201ENST00000403971 FSTP19883 344 aa7.59□□□□□ -1.19
HMGB3P19-201ENST00000403971 SERINC3Q13530 473 aa7.59□□□□□ -1.19
HMGB3P19-201ENST00000403971 CCDC144BQ3MJ40 725 aa7.59□□□□□ -1.19
HMGB3P19-201ENST00000403971 OGFOD3Q6PK18 319 aa7.59□□□□□ -1.19
HMGB3P19-201ENST00000403971 C6orf15Q6UXA7 325 aaPredicted RBP7.59□□□□□ -1.19
HMGB3P19-201ENST00000403971 KREMEN1Q96MU8 473 aa7.59□□□□□ -1.19
HMGB3P19-201ENST00000403971 C9IYK1 514 aa7.58□□□□□ -1.2
HMGB3P19-201ENST00000403971 CLEC3AO75596 197 aa7.58□□□□□ -1.2
HMGB3P19-201ENST00000403971 TP53P04637 393 aaPredicted RBP7.58□□□□□ -1.2
HMGB3P19-201ENST00000403971 H2AFB1P0C5Y9 115 aa7.58□□□□□ -1.2
HMGB3P19-201ENST00000403971 H2AFB2P0C5Z0 115 aa7.58□□□□□ -1.2
HMGB3P19-201ENST00000403971 CCNFP41002 786 aa7.58□□□□□ -1.2
HMGB3P19-201ENST00000403971 FAM214BQ7L5A3 538 aa7.58□□□□□ -1.2
HMGB3P19-201ENST00000403971 GIMAP7Q8NHV1 300 aa7.58□□□□□ -1.2
HMGB3P19-201ENST00000403971 SHKBP1Q8TBC3 707 aa7.58□□□□□ -1.2
HMGB3P19-201ENST00000403971 HEXIM2Q96MH2 286 aaKnown RBP7.58□□□□□ -1.2
HMGB3P19-201ENST00000403971 SUCOQ9UBS9 1254 aaKnown RBP7.58□□□□□ -1.2
HMGB3P19-201ENST00000403971 SLC12A7Q9Y666 1083 aa7.58□□□□□ -1.2
HMGB3P19-201ENST00000403971 U3KQE9 123 aa7.58□□□□□ -1.2
HMGB3P19-201ENST00000403971 CCDC85CA6NKD9 419 aa7.57□□□□□ -1.2
HMGB3P19-201ENST00000403971 WDR64B1ANS9 1081 aa7.57□□□□□ -1.2
HMGB3P19-201ENST00000403971 DYRK3O43781 588 aa7.57□□□□□ -1.2
HMGB3P19-201ENST00000403971 LRRN2O75325 713 aa7.57□□□□□ -1.2
HMGB3P19-201ENST00000403971 DDAH1O94760 285 aa7.57□□□□□ -1.2
HMGB3P19-201ENST00000403971 GJB6O95452 261 aa7.57□□□□□ -1.2
HMGB3P19-201ENST00000403971 IGLV1-40P01703 118 aa7.57□□□□□ -1.2
HMGB3P19-201ENST00000403971 ETV3P41162 512 aa7.57□□□□□ -1.2
HMGB3P19-201ENST00000403971 FXNQ16595 210 aa7.57□□□□□ -1.2
HMGB3P19-201ENST00000403971 DDR2Q16832 855 aa7.57□□□□□ -1.2
HMGB3P19-201ENST00000403971 GNPTABQ3T906 1256 aa7.57□□□□□ -1.2
HMGB3P19-201ENST00000403971 NBPF6Q5VWK0 638 aa7.57□□□□□ -1.2
HMGB3P19-201ENST00000403971 VHLLQ6RSH7 139 aa7.57□□□□□ -1.2
HMGB3P19-201ENST00000403971 KLHL6Q8WZ60 621 aa7.57□□□□□ -1.2
HMGB3P19-201ENST00000403971 NBPF4Q96M43 638 aa7.57□□□□□ -1.2
HMGB3P19-201ENST00000403971 DBNDD2Q9BQY9 259 aa7.57□□□□□ -1.2
HMGB3P19-201ENST00000403971 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.57□□□□□ -1.2
HMGB3P19-201ENST00000403971 OSBPL2Q9H1P3 480 aa7.57□□□□□ -1.2
HMGB3P19-201ENST00000403971 PHAXQ9H814 394 aaKnown RBP7.57□□□□□ -1.2
HMGB3P19-201ENST00000403971 ZNF214Q9UL59 606 aaPredicted RBP7.57□□□□□ -1.2
HMGB3P19-201ENST00000403971 SCRIBQ14160 1630 aa7.56□□□□□ -1.2
HMGB3P19-201ENST00000403971 PRR33A8MZF0 331 aa7.56□□□□□ -1.2
HMGB3P19-201ENST00000403971 U2SURPO15042 1029 aaKnown RBP7.56□□□□□ -1.2
HMGB3P19-201ENST00000403971 FURINP09958 794 aa7.56□□□□□ -1.2
HMGB3P19-201ENST00000403971 PMS1P54277 932 aaKnown RBP7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 130.1 ms