RNA–Protein interactions for RNA: ENST00000389759.7

PKP4-202, Transcript of plakophilin 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PKP4, Length 4,443 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-202ENST00000389759 CERS3Q8IU89 383 aa9.63□□□□□ -0.87
PKP4-202ENST00000389759 PLEKHA4Q9H4M7 779 aa9.63□□□□□ -0.87
PKP4-202ENST00000389759 VPS54Q9P1Q0 977 aa9.63□□□□□ -0.87
PKP4-202ENST00000389759 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.63□□□□□ -0.871e-6■■■□□ 18.3
PKP4-202ENST00000389759 TNRQ92752 1358 aa9.63□□□□□ -0.87
PKP4-202ENST00000389759 KDM6BO15054 1643 aa9.62□□□□□ -0.87
PKP4-202ENST00000389759 ERVK-7P63135 1459 aa9.62□□□□□ -0.87
PKP4-202ENST00000389759 EXOC5O00471 708 aa9.62□□□□□ -0.87
PKP4-202ENST00000389759 SPOPO43791 374 aa9.62□□□□□ -0.87
PKP4-202ENST00000389759 PRDM1O75626 825 aa9.62□□□□□ -0.87
PKP4-202ENST00000389759 APBA1Q02410 837 aa9.62□□□□□ -0.87
PKP4-202ENST00000389759 KIF2CQ99661 725 aa9.62□□□□□ -0.87
PKP4-202ENST00000389759 HAUS7Q99871 368 aa9.62□□□□□ -0.87
PKP4-202ENST00000389759 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.62□□□□□ -0.87
PKP4-202ENST00000389759 MORC2Q9Y6X9 1032 aaPredicted RBP9.62□□□□□ -0.87
PKP4-202ENST00000389759 C6orf229H3BNL8 230 aa9.62□□□□□ -0.87
PKP4-202ENST00000389759 FLOT1O75955 427 aa9.62□□□□□ -0.87
PKP4-202ENST00000389759 FAM13AO94988 1023 aa9.62□□□□□ -0.87
PKP4-202ENST00000389759 ERCC3P19447 782 aa9.62□□□□□ -0.87
PKP4-202ENST00000389759 SLC8A1P32418 973 aa9.62□□□□□ -0.87
PKP4-202ENST00000389759 GBP1P32455 592 aa9.62□□□□□ -0.87
PKP4-202ENST00000389759 RESTQ13127 1097 aa9.62□□□□□ -0.87
PKP4-202ENST00000389759 PEX26Q7Z412 305 aa9.62□□□□□ -0.87
PKP4-202ENST00000389759 IL17REQ8NFR9 667 aa9.62□□□□□ -0.87
PKP4-202ENST00000389759 NLRC4Q9NPP4 1024 aa9.62□□□□□ -0.87
PKP4-202ENST00000389759 CYP2E1P05181 493 aaPredicted RBP9.62□□□□□ -0.87
PKP4-202ENST00000389759 GCKP35557 465 aa9.62□□□□□ -0.87
PKP4-202ENST00000389759 CCDC38Q502W7 563 aa9.62□□□□□ -0.87
PKP4-202ENST00000389759 FEZ2Q9UHY8 353 aaPredicted RBP9.62□□□□□ -0.87
PKP4-202ENST00000389759 NEURL1BA8MQ27 555 aa9.62□□□□□ -0.87
PKP4-202ENST00000389759 CASP8Q14790 479 aa9.62□□□□□ -0.87
PKP4-202ENST00000389759 SFMBT2Q5VUG0 894 aa9.62□□□□□ -0.87
PKP4-202ENST00000389759 VSTM4Q8IW00 320 aa9.62□□□□□ -0.87
PKP4-202ENST00000389759 ENC1O14682 589 aa9.61□□□□□ -0.87
PKP4-202ENST00000389759 EPB41P11171 864 aaKnown RBP9.61□□□□□ -0.87
PKP4-202ENST00000389759 TNFAIP3P21580 790 aa9.61□□□□□ -0.87
PKP4-202ENST00000389759 NEDD9Q14511 834 aa9.61□□□□□ -0.87
PKP4-202ENST00000389759 E2F4Q16254 413 aa9.61□□□□□ -0.87
PKP4-202ENST00000389759 PTPN21Q16825 1174 aa9.61□□□□□ -0.87
PKP4-202ENST00000389759 AKNAD1Q5T1N1 836 aa9.61□□□□□ -0.87
PKP4-202ENST00000389759 HINFPQ9BQA5 517 aa9.61□□□□□ -0.87
PKP4-202ENST00000389759 RIPOR2Q9Y4F9 1068 aa9.61□□□□□ -0.87
PKP4-202ENST00000389759 KDM5AP29375 1690 aaKnown RBP9.61□□□□□ -0.87
PKP4-202ENST00000389759 SYNMO15061 1565 aa9.61□□□□□ -0.87
PKP4-202ENST00000389759 hCG_1642624A0A1W2PR95 340 aa9.61□□□□□ -0.87
PKP4-202ENST00000389759 PPP6R2O75170 966 aa9.61□□□□□ -0.87
PKP4-202ENST00000389759 FGAP02671 866 aa9.61□□□□□ -0.87
PKP4-202ENST00000389759 TXKP42681 527 aa9.61□□□□□ -0.87
PKP4-202ENST00000389759 CTDSPL2Q05D32 466 aa9.61□□□□□ -0.87
PKP4-202ENST00000389759 TRAF1Q13077 416 aa9.61□□□□□ -0.87
PKP4-202ENST00000389759 KCTD16Q68DU8 428 aa9.61□□□□□ -0.87
PKP4-202ENST00000389759 AEBP2Q6ZN18 517 aaPredicted RBP9.61□□□□□ -0.87
PKP4-202ENST00000389759 TACO1Q9BSH4 297 aaKnown RBP9.61□□□□□ -0.87
PKP4-202ENST00000389759 C19orf44Q9H6X5 657 aa9.61□□□□□ -0.87
PKP4-202ENST00000389759 PLCB1Q9NQ66 1216 aa9.61□□□□□ -0.87
PKP4-202ENST00000389759 ARHGEF10O15013 1369 aa9.61□□□□□ -0.87
PKP4-202ENST00000389759 CARMIL3Q8ND23 1372 aa9.61□□□□□ -0.87
PKP4-202ENST00000389759 ZMYM6O95789 1325 aa9.61□□□□□ -0.87
PKP4-202ENST00000389759 ZNF532Q9HCE3 1301 aa9.61□□□□□ -0.87
PKP4-202ENST00000389759 CLGNO14967 610 aa9.61□□□□□ -0.87
PKP4-202ENST00000389759 RGS16O15492 202 aaPredicted RBP9.61□□□□□ -0.87
PKP4-202ENST00000389759 ATP1A3P13637 1013 aa9.61□□□□□ -0.87
PKP4-202ENST00000389759 ITGA6P23229 1130 aa9.61□□□□□ -0.87
PKP4-202ENST00000389759 NECTIN1Q15223 517 aa9.61□□□□□ -0.87
PKP4-202ENST00000389759 DENND2CQ68D51 928 aa9.61□□□□□ -0.87
PKP4-202ENST00000389759 ZNF654Q8IZM8 581 aa9.61□□□□□ -0.87
PKP4-202ENST00000389759 RPGRQ92834 1020 aaKnown RBP9.61□□□□□ -0.87
PKP4-202ENST00000389759 VEZTQ9HBM0 779 aa9.61□□□□□ -0.87
PKP4-202ENST00000389759 LRWD1Q9UFC0 647 aa9.61□□□□□ -0.87
PKP4-202ENST00000389759 PUM3Q15397 648 aaKnown RBP9.6□□□□□ -0.87
PKP4-202ENST00000389759 TTC19Q6DKK2 380 aaPredicted RBP9.6□□□□□ -0.87
PKP4-202ENST00000389759 ZNF589Q86UQ0 364 aaPredicted RBP9.6□□□□□ -0.87
PKP4-202ENST00000389759 SYCE1Q8N0S2 351 aa9.6□□□□□ -0.87
PKP4-202ENST00000389759 UBL4BQ8N7F7 174 aa9.6□□□□□ -0.87
PKP4-202ENST00000389759 BICD1Q96G01 975 aa9.6□□□□□ -0.87
PKP4-202ENST00000389759 GSDMAQ96QA5 445 aa9.6□□□□□ -0.87
PKP4-202ENST00000389759 RAB17Q9H0T7 212 aa9.6□□□□□ -0.87
PKP4-202ENST00000389759 HDAC9Q9UKV0 1011 aa9.6□□□□□ -0.87
PKP4-202ENST00000389759 PLXNC1O60486 1568 aa9.6□□□□□ -0.87
PKP4-202ENST00000389759 MAGEA9P43362 315 aa9.6□□□□□ -0.87
PKP4-202ENST00000389759 COPB1P53618 953 aaKnown RBP9.6□□□□□ -0.87
PKP4-202ENST00000389759 IFT88Q13099 833 aa9.6□□□□□ -0.87
PKP4-202ENST00000389759 SF3B2Q13435 895 aaKnown RBP9.6□□□□□ -0.87
PKP4-202ENST00000389759 HERC4Q5GLZ8 1057 aaPredicted RBP9.6□□□□□ -0.87
PKP4-202ENST00000389759 ICE2Q659A1 982 aa9.6□□□□□ -0.87
PKP4-202ENST00000389759 ZNF365Q70YC5 407 aa9.6□□□□□ -0.87
PKP4-202ENST00000389759 PLA2G4DQ86XP0 818 aa9.6□□□□□ -0.87
PKP4-202ENST00000389759 CCDC170Q8IYT3 715 aa9.6□□□□□ -0.87
PKP4-202ENST00000389759 SREK1Q8WXA9 508 aaKnown RBP9.6□□□□□ -0.87
PKP4-202ENST00000389759 VCXQ9H320 206 aa9.6□□□□□ -0.87
PKP4-202ENST00000389759 TRPM2O94759 1503 aa9.6□□□□□ -0.87
PKP4-202ENST00000389759 PTCH1Q13635 1447 aa9.6□□□□□ -0.87
PKP4-202ENST00000389759 SPDYE3A6NKU9 549 aa9.6□□□□□ -0.87
PKP4-202ENST00000389759 CCNT1O60563 726 aaKnown RBP9.6□□□□□ -0.87
PKP4-202ENST00000389759 ZMYND10O75800 440 aa9.6□□□□□ -0.87
PKP4-202ENST00000389759 RAD51AP2Q09MP3 1159 aa9.6□□□□□ -0.87
PKP4-202ENST00000389759 CCDC144BQ3MJ40 725 aa9.6□□□□□ -0.87
PKP4-202ENST00000389759 FYB2Q5VWT5 728 aa9.6□□□□□ -0.87
PKP4-202ENST00000389759 CC2D1AQ6P1N0 951 aaPredicted RBP9.6□□□□□ -0.87
PKP4-202ENST00000389759 DYMQ7RTS9 669 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms