RNA–Protein interactions for RNA: ENST00000378122.4

PCDHA9-201, Transcript of protocadherin alpha 9, humanhuman

BASIC

Gene PCDHA9, Length 6,900 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-201ENST00000378122 GPAA1O43292 621 aa13.32□□□□□ -0.28
PCDHA9-201ENST00000378122 FYB2Q5VWT5 728 aa13.32□□□□□ -0.28
PCDHA9-201ENST00000378122 GDAP1L1Q96MZ0 367 aa13.32□□□□□ -0.28
PCDHA9-201ENST00000378122 ANGEL1Q9UNK9 670 aaKnown RBP13.32□□□□□ -0.28
PCDHA9-201ENST00000378122 NR1I2O75469 434 aa13.32□□□□□ -0.28
PCDHA9-201ENST00000378122 VWA3BQ502W6 1294 aa13.32□□□□□ -0.28
PCDHA9-201ENST00000378122 DIS3L2Q8IYB7 885 aaKnown RBP13.32□□□□□ -0.28
PCDHA9-201ENST00000378122 NUP58Q9BVL2 599 aa13.32□□□□□ -0.28
PCDHA9-201ENST00000378122 BICRAQ9NZM4 1560 aa13.31□□□□□ -0.28
PCDHA9-201ENST00000378122 ARHGAP25P42331 645 aa13.31□□□□□ -0.28
PCDHA9-201ENST00000378122 TPD52P55327 224 aaPredicted RBP13.31□□□□□ -0.28
PCDHA9-201ENST00000378122 USH1GQ495M9 461 aa13.31□□□□□ -0.28
PCDHA9-201ENST00000378122 METTL22Q9BUU2 404 aaPredicted RBP13.31□□□□□ -0.28
PCDHA9-201ENST00000378122 TXNDC16Q9P2K2 825 aa13.31□□□□□ -0.28
PCDHA9-201ENST00000378122 WDR62O43379 1518 aa13.31□□□□□ -0.28
PCDHA9-201ENST00000378122 ARHGAP6O43182 974 aa13.31□□□□□ -0.28
PCDHA9-201ENST00000378122 ERCC5P28715 1186 aaPredicted RBP13.31□□□□□ -0.28
PCDHA9-201ENST00000378122 NFE2L3Q9Y4A8 694 aa13.31□□□□□ -0.28
PCDHA9-201ENST00000378122 CLGNO14967 610 aa13.31□□□□□ -0.28
PCDHA9-201ENST00000378122 NSMFQ6X4W1 530 aa13.31□□□□□ -0.28
PCDHA9-201ENST00000378122 DPP9Q86TI2 863 aa13.31□□□□□ -0.28
PCDHA9-201ENST00000378122 FAM193BQ96PV7 902 aaPredicted RBP13.31□□□□□ -0.28
PCDHA9-201ENST00000378122 BRD1O95696 1058 aa13.31□□□□□ -0.28
PCDHA9-201ENST00000378122 TRAF1Q13077 416 aa13.31□□□□□ -0.28
PCDHA9-201ENST00000378122 TMTC1Q8IUR5 882 aa13.31□□□□□ -0.28
PCDHA9-201ENST00000378122 GPR161Q8N6U8 529 aaKnown RBP13.31□□□□□ -0.28
PCDHA9-201ENST00000378122 PRDM5Q9NQX1 630 aaPredicted RBP13.31□□□□□ -0.28
PCDHA9-201ENST00000378122 MKRN1Q9UHC7 482 aaKnown RBP13.31□□□□□ -0.28
PCDHA9-201ENST00000378122 FAM169AQ9Y6X4 670 aa13.31□□□□□ -0.28
PCDHA9-201ENST00000378122 KIAA0556O60303 1618 aa13.31□□□□□ -0.28
PCDHA9-201ENST00000378122 PKP1Q13835 747 aa13.31□□□□□ -0.28
PCDHA9-201ENST00000378122 DYMQ7RTS9 669 aa13.31□□□□□ -0.28
PCDHA9-201ENST00000378122 CACNA2D3Q8IZS8 1091 aa13.31□□□□□ -0.28
PCDHA9-201ENST00000378122 HOOK2Q96ED9 719 aa13.31□□□□□ -0.28
PCDHA9-201ENST00000378122 PPP1R2P41236 205 aa13.3□□□□□ -0.28
PCDHA9-201ENST00000378122 ZNF131P52739 623 aa13.3□□□□□ -0.28
PCDHA9-201ENST00000378122 SARNPP82979 210 aaKnown RBP13.3□□□□□ -0.28
PCDHA9-201ENST00000378122 PPP1R21Q6ZMI0 780 aa13.3□□□□□ -0.28
PCDHA9-201ENST00000378122 STAMQ92783 540 aa13.3□□□□□ -0.28
PCDHA9-201ENST00000378122 SERTAD1Q9UHV2 236 aa13.3□□□□□ -0.28
PCDHA9-201ENST00000378122 CEP104O60308 925 aa13.3□□□□□ -0.28
PCDHA9-201ENST00000378122 SEPT6Q14141 434 aa13.3□□□□□ -0.28
PCDHA9-201ENST00000378122 R3HDM1Q15032 1099 aaKnown RBP13.3□□□□□ -0.28
PCDHA9-201ENST00000378122 GKAP1Q5VSY0 366 aaPredicted RBP13.3□□□□□ -0.28
PCDHA9-201ENST00000378122 SND1Q7KZF4 910 aaKnown RBP eCLIP13.3□□□□□ -0.28
PCDHA9-201ENST00000378122 METTL13Q8N6R0 699 aa13.3□□□□□ -0.28
PCDHA9-201ENST00000378122 KIFAP3Q92845 792 aa13.3□□□□□ -0.28
PCDHA9-201ENST00000378122 KIFC2Q96AC6 838 aa13.3□□□□□ -0.28
PCDHA9-201ENST00000378122 FAM89AQ96GI7 184 aa13.3□□□□□ -0.28
PCDHA9-201ENST00000378122 TRAPPC8Q9Y2L5 1435 aa13.3□□□□□ -0.28
PCDHA9-201ENST00000378122 ALDH3A1P30838 453 aa13.3□□□□□ -0.28
PCDHA9-201ENST00000378122 TMEM106CQ9BVX2 250 aa13.3□□□□□ -0.28
PCDHA9-201ENST00000378122 ZBED4O75132 1171 aa13.3□□□□□ -0.28
PCDHA9-201ENST00000378122 SCNN1DP51172 638 aa13.3□□□□□ -0.28
PCDHA9-201ENST00000378122 KRT40Q6A162 431 aa13.3□□□□□ -0.28
PCDHA9-201ENST00000378122 HINFPQ9BQA5 517 aa13.3□□□□□ -0.28
PCDHA9-201ENST00000378122 ZMYM3Q14202 1370 aa13.3□□□□□ -0.28
PCDHA9-201ENST00000378122 UBL4BQ8N7F7 174 aa13.3□□□□□ -0.28
PCDHA9-201ENST00000378122 KIAA1524Q8TCG1 905 aa13.3□□□□□ -0.28
PCDHA9-201ENST00000378122 SPATA17Q96L03 361 aa13.3□□□□□ -0.28
PCDHA9-201ENST00000378122 SH2D4AQ9H788 454 aa13.3□□□□□ -0.28
PCDHA9-201ENST00000378122 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.3□□□□□ -0.28
PCDHA9-201ENST00000378122 EYA2O00167 538 aa13.3□□□□□ -0.28
PCDHA9-201ENST00000378122 NEDD9Q14511 834 aa13.3□□□□□ -0.28
PCDHA9-201ENST00000378122 TYW1BQ6NUM6 668 aa13.3□□□□□ -0.28
PCDHA9-201ENST00000378122 PPP1R12CQ9BZL4 782 aa13.3□□□□□ -0.28
PCDHA9-201ENST00000378122 GPBP1L1Q9HC44 474 aaPredicted RBP13.3□□□□□ -0.28
PCDHA9-201ENST00000378122 DENND2AQ9ULE3 1009 aa13.3□□□□□ -0.28
PCDHA9-201ENST00000378122 hCG_1642624A0A1W2PR95 340 aa13.29□□□□□ -0.28
PCDHA9-201ENST00000378122 E7EWF7 191 aa13.29□□□□□ -0.28
PCDHA9-201ENST00000378122 ERCC6LQ2NKX8 1250 aa13.29□□□□□ -0.28
PCDHA9-201ENST00000378122 NCAPH2Q6IBW4 605 aa13.29□□□□□ -0.28
PCDHA9-201ENST00000378122 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.29□□□□□ -0.28
PCDHA9-201ENST00000378122 PLBD2Q8NHP8 589 aa13.29□□□□□ -0.28
PCDHA9-201ENST00000378122 NAP1L4Q99733 375 aaKnown RBP13.29□□□□□ -0.28
PCDHA9-201ENST00000378122 ACTN4O43707 911 aaKnown RBP13.29□□□□□ -0.28
PCDHA9-201ENST00000378122 LRMPQ12912 555 aa13.29□□□□□ -0.28
PCDHA9-201ENST00000378122 ERFEQ4G0M1 354 aa13.29□□□□□ -0.28
PCDHA9-201ENST00000378122 DALRD3Q5D0E6 543 aaKnown RBP13.29□□□□□ -0.28
PCDHA9-201ENST00000378122 ARHGEF2Q92974 986 aaKnown RBP13.29□□□□□ -0.28
PCDHA9-201ENST00000378122 EN1Q05925 392 aaPredicted RBP13.29□□□□□ -0.28
PCDHA9-201ENST00000378122 APPBP2Q92624 585 aa13.29□□□□□ -0.28
PCDHA9-201ENST00000378122 FEZ2Q9UHY8 353 aaPredicted RBP13.29□□□□□ -0.28
PCDHA9-201ENST00000378122 YTHDC2Q9H6S0 1430 aaKnown RBP13.29□□□□□ -0.28
PCDHA9-201ENST00000378122 PLCG2P16885 1265 aa13.29□□□□□ -0.28
PCDHA9-201ENST00000378122 WDR44Q5JSH3 913 aa13.29□□□□□ -0.28
PCDHA9-201ENST00000378122 GTF2IP78347 998 aa13.28□□□□□ -0.28
PCDHA9-201ENST00000378122 PUM3Q15397 648 aaKnown RBP13.28□□□□□ -0.28
PCDHA9-201ENST00000378122 DESI2Q9BSY9 194 aa13.28□□□□□ -0.28
PCDHA9-201ENST00000378122 DDX21Q9NR30 783 aaKnown RBP eCLIP13.28□□□□□ -0.28
PCDHA9-201ENST00000378122 CLRN2A0PK11 232 aa13.28□□□□□ -0.28
PCDHA9-201ENST00000378122 A6NNZ2 444 aa13.28□□□□□ -0.28
PCDHA9-201ENST00000378122 GIGYF1O75420 1035 aaPredicted RBP13.28□□□□□ -0.28
PCDHA9-201ENST00000378122 DMTNQ08495 405 aa13.28□□□□□ -0.28
PCDHA9-201ENST00000378122 TUBB8Q3ZCM7 444 aa13.28□□□□□ -0.28
PCDHA9-201ENST00000378122 FAM196AQ6ZSG2 479 aa13.28□□□□□ -0.28
PCDHA9-201ENST00000378122 PNMA8AQ86V59 439 aaPredicted RBP13.28□□□□□ -0.28
PCDHA9-201ENST00000378122 CHAMP1Q96JM3 812 aa13.28□□□□□ -0.28
PCDHA9-201ENST00000378122 ODF2LQ9ULJ1 636 aa13.28□□□□□ -0.28
PCDHA9-201ENST00000378122 RNF123Q5XPI4 1314 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms