RNA–Protein interactions for RNA: ENST00000361545.9

CLIP2-202, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best) BASIC

Gene CLIP2, Length 5,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-202ENST00000361545 FLOT1O75955 427 aa20.76■□□□□ 0.91
CLIP2-202ENST00000361545 EXOC3O60645 756 aa20.75■□□□□ 0.91
CLIP2-202ENST00000361545 STAMBPO95630 424 aa20.75■□□□□ 0.91
CLIP2-202ENST00000361545 GPKOWQ92917 476 aaPredicted RBP eCLIP20.75■□□□□ 0.91
CLIP2-202ENST00000361545 GTF3C6Q969F1 213 aa20.75■□□□□ 0.91
CLIP2-202ENST00000361545 TNFAIP3P21580 790 aa20.75■□□□□ 0.91
CLIP2-202ENST00000361545 SLC8A3P57103 927 aa20.75■□□□□ 0.91
CLIP2-202ENST00000361545 PRR16Q569H4 304 aa20.75■□□□□ 0.91
CLIP2-202ENST00000361545 KIFAP3Q92845 792 aa20.75■□□□□ 0.91
CLIP2-202ENST00000361545 IQCGQ9H095 443 aaKnown RBP20.75■□□□□ 0.91
CLIP2-202ENST00000361545 MLXIPQ9HAP2 919 aa20.75■□□□□ 0.91
CLIP2-202ENST00000361545 ATP8A2Q9NTI2 1148 aa20.75■□□□□ 0.91
CLIP2-202ENST00000361545 MRPS9P82933 396 aaKnown RBP20.75■□□□□ 0.91
CLIP2-202ENST00000361545 TM6SF1Q9BZW5 370 aa20.75■□□□□ 0.91
CLIP2-202ENST00000361545 PAIP2Q9BPZ3 127 aaKnown RBP20.75■□□□□ 0.91
CLIP2-202ENST00000361545 STK24Q9Y6E0 443 aa20.75■□□□□ 0.91
CLIP2-202ENST00000361545 KDM5CP41229 1560 aa20.75■□□□□ 0.91
CLIP2-202ENST00000361545 TMEM232C9JQI7 657 aa20.75■□□□□ 0.91
CLIP2-202ENST00000361545 ABCB5Q2M3G0 1257 aa20.75■□□□□ 0.91
CLIP2-202ENST00000361545 FAM47CQ5HY64 1035 aa20.75■□□□□ 0.91
CLIP2-202ENST00000361545 CCDC122Q5T0U0 273 aa20.75■□□□□ 0.91
CLIP2-202ENST00000361545 NLRP10Q86W26 655 aa20.75■□□□□ 0.91
CLIP2-202ENST00000361545 NOL12Q9UGY1 213 aaKnown RBP eCLIP20.75■□□□□ 0.91
CLIP2-202ENST00000361545 V9GYY5 206 aaPredicted RBP20.75■□□□□ 0.91
CLIP2-202ENST00000361545 DDX12PQ92771 950 aa20.74■□□□□ 0.91
CLIP2-202ENST00000361545 MIER3Q7Z3K6 550 aa20.74■□□□□ 0.91
CLIP2-202ENST00000361545 SPICE1Q8N0Z3 855 aa20.74■□□□□ 0.91
CLIP2-202ENST00000361545 ANKRD35Q8N283 1001 aa20.74■□□□□ 0.91
CLIP2-202ENST00000361545 CLSTN2Q9H4D0 955 aa20.74■□□□□ 0.91
CLIP2-202ENST00000361545 ARAP3Q8WWN8 1544 aa20.74■□□□□ 0.91
CLIP2-202ENST00000361545 KRT19P08727 400 aa20.74■□□□□ 0.91
CLIP2-202ENST00000361545 SLFN13Q68D06 897 aa20.74■□□□□ 0.91
CLIP2-202ENST00000361545 NCAPG2Q86XI2 1143 aa20.74■□□□□ 0.91
CLIP2-202ENST00000361545 BAG1Q99933 345 aaPredicted RBP20.74■□□□□ 0.91
CLIP2-202ENST00000361545 CHD1O14646 1710 aa20.74■□□□□ 0.91
CLIP2-202ENST00000361545 M0QZ92 97 aa20.74■□□□□ 0.91
CLIP2-202ENST00000361545 ATP2A1O14983 1001 aa20.74■□□□□ 0.91
CLIP2-202ENST00000361545 GNPTABQ3T906 1256 aa20.74■□□□□ 0.91
CLIP2-202ENST00000361545 CDAN1Q8IWY9 1227 aa20.74■□□□□ 0.91
CLIP2-202ENST00000361545 ZBTB9Q96C00 473 aa20.74■□□□□ 0.91
CLIP2-202ENST00000361545 CSRNP1Q96S65 589 aa20.74■□□□□ 0.91
CLIP2-202ENST00000361545 RAD17O75943 681 aa20.73■□□□□ 0.91
CLIP2-202ENST00000361545 PROCA1Q8NCQ7 364 aaPredicted RBP20.73■□□□□ 0.91
CLIP2-202ENST00000361545 PALD1Q9ULE6 856 aa20.73■□□□□ 0.91
CLIP2-202ENST00000361545 BLIDQ8IZY5 108 aa20.73■□□□□ 0.91
CLIP2-202ENST00000361545 RNF34Q969K3 372 aa20.73■□□□□ 0.91
CLIP2-202ENST00000361545 CIAO1O76071 339 aa20.73■□□□□ 0.91
CLIP2-202ENST00000361545 UBE3CQ15386 1083 aa20.73■□□□□ 0.91
CLIP2-202ENST00000361545 INF2Q27J81 1249 aa20.73■□□□□ 0.91
CLIP2-202ENST00000361545 METTL13Q8N6R0 699 aa20.73■□□□□ 0.91
CLIP2-202ENST00000361545 UTP18Q9Y5J1 556 aaKnown RBP eCLIP20.73■□□□□ 0.91
CLIP2-202ENST00000361545 KDM6BO15054 1643 aa20.73■□□□□ 0.91
CLIP2-202ENST00000361545 BBOX1O75936 387 aa20.73■□□□□ 0.91
CLIP2-202ENST00000361545 POSTNQ15063 836 aa20.73■□□□□ 0.91
CLIP2-202ENST00000361545 FBXO11Q86XK2 927 aa20.73■□□□□ 0.91
CLIP2-202ENST00000361545 CNGA1P29973 690 aa20.72■□□□□ 0.91
CLIP2-202ENST00000361545 MAK16Q9BXY0 300 aaKnown RBP20.72■□□□□ 0.91
CLIP2-202ENST00000361545 PRDM15P57071 1507 aaPredicted RBP20.72■□□□□ 0.91
CLIP2-202ENST00000361545 HEG1Q9ULI3 1381 aa20.72■□□□□ 0.91
CLIP2-202ENST00000361545 MCM6Q14566 821 aa20.72■□□□□ 0.91
CLIP2-202ENST00000361545 CCDC117Q8IWD4 279 aaPredicted RBP20.72■□□□□ 0.91
CLIP2-202ENST00000361545 RDH13Q8NBN7 331 aa20.72■□□□□ 0.91
CLIP2-202ENST00000361545 ZNF274Q96GC6 653 aaPredicted RBP20.72■□□□□ 0.91
CLIP2-202ENST00000361545 CCDC114Q96M63 670 aa20.72■□□□□ 0.91
CLIP2-202ENST00000361545 POLR2MP0CAP2 368 aa20.72■□□□□ 0.91
CLIP2-202ENST00000361545 DYNLL1P63167 89 aaKnown RBP20.72■□□□□ 0.91
CLIP2-202ENST00000361545 PALLDQ8WX93 1383 aa20.72■□□□□ 0.91
CLIP2-202ENST00000361545 ZNF526Q8TF50 670 aaPredicted RBP20.72■□□□□ 0.91
CLIP2-202ENST00000361545 CCDC77Q9BR77 488 aa20.72■□□□□ 0.91
CLIP2-202ENST00000361545 ZMYND15Q9H091 742 aa20.72■□□□□ 0.91
CLIP2-202ENST00000361545 GADD45BO75293 160 aaPredicted RBP20.71■□□□□ 0.91
CLIP2-202ENST00000361545 SYT10Q6XYQ8 523 aa20.71■□□□□ 0.91
CLIP2-202ENST00000361545 FMNL3Q8IVF7 1028 aa20.71■□□□□ 0.91
CLIP2-202ENST00000361545 SLC5A4Q9NY91 659 aa20.71■□□□□ 0.91
CLIP2-202ENST00000361545 MRPL11Q9Y3B7 192 aaKnown RBP20.71■□□□□ 0.91
CLIP2-202ENST00000361545 SPOPO43791 374 aa20.71■□□□□ 0.91
CLIP2-202ENST00000361545 PI16Q6UXB8 463 aa20.71■□□□□ 0.91
CLIP2-202ENST00000361545 SPATA31A3Q5VYP0 1347 aa20.71■□□□□ 0.91
CLIP2-202ENST00000361545 SEMA3EO15041 775 aa20.71■□□□□ 0.91
CLIP2-202ENST00000361545 TECP42680 631 aa20.71■□□□□ 0.91
CLIP2-202ENST00000361545 MLKLQ8NB16 471 aa20.71■□□□□ 0.91
CLIP2-202ENST00000361545 PRIMPOLQ96LW4 560 aa20.71■□□□□ 0.91
CLIP2-202ENST00000361545 SPC25Q9HBM1 224 aa20.71■□□□□ 0.91
CLIP2-202ENST00000361545 TAB2Q9NYJ8 693 aa20.71■□□□□ 0.91
CLIP2-202ENST00000361545 TRPC6Q9Y210 931 aa20.71■□□□□ 0.91
CLIP2-202ENST00000361545 PPP1R7Q15435 360 aa20.71■□□□□ 0.91
CLIP2-202ENST00000361545 MYSM1Q5VVJ2 828 aa20.71■□□□□ 0.91
CLIP2-202ENST00000361545 ANTXR1Q9H6X2 564 aa20.71■□□□□ 0.91
CLIP2-202ENST00000361545 CCDC25Q86WR0 208 aa20.71■□□□□ 0.91
CLIP2-202ENST00000361545 ZKSCAN5Q9Y2L8 839 aa20.71■□□□□ 0.91
CLIP2-202ENST00000361545 IFT81Q8WYA0 676 aa20.7■□□□□ 0.9
CLIP2-202ENST00000361545 TPCN1Q9ULQ1 816 aa20.7■□□□□ 0.9
CLIP2-202ENST00000361545 FERP16591 822 aa20.7■□□□□ 0.9
CLIP2-202ENST00000361545 ARFGAP3Q9NP61 516 aa20.7■□□□□ 0.9
CLIP2-202ENST00000361545 SERTAD1Q9UHV2 236 aa20.7■□□□□ 0.9
CLIP2-202ENST00000361545 NFE2L3Q9Y4A8 694 aa20.7■□□□□ 0.9
CLIP2-202ENST00000361545 MMP10P09238 476 aa20.69■□□□□ 0.9
CLIP2-202ENST00000361545 BMS1Q14692 1282 aaKnown RBP20.69■□□□□ 0.9
CLIP2-202ENST00000361545 NOSTRINQ8IVI9 506 aa20.69■□□□□ 0.9
CLIP2-202ENST00000361545 SCG2P13521 617 aa20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms