RNA–Protein interactions for RNA: ENST00000348986.3

CHRD-202, Transcript of chordin, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHRD, Length 3,155 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-202ENST00000348986 HOOK1Q9UJC3 728 aaKnown RBP20.34■□□□□ 0.85
CHRD-202ENST00000348986 NFE2L3Q9Y4A8 694 aa20.34■□□□□ 0.85
CHRD-202ENST00000348986 CICQ96RK0 1608 aaPredicted RBP20.33■□□□□ 0.85
CHRD-202ENST00000348986 A0A087X0B3 334 aa20.33■□□□□ 0.85
CHRD-202ENST00000348986 CDC25AP30304 524 aa20.33■□□□□ 0.85
CHRD-202ENST00000348986 GTF2F1P35269 517 aaKnown RBP eCLIP20.33■□□□□ 0.85
CHRD-202ENST00000348986 FAM177A1Q8N128 213 aaPredicted RBP20.33■□□□□ 0.85
CHRD-202ENST00000348986 GPKOWQ92917 476 aaPredicted RBP eCLIP20.33■□□□□ 0.85
CHRD-202ENST00000348986 MCM7P33993 719 aa20.33■□□□□ 0.84
CHRD-202ENST00000348986 TFAP4Q01664 338 aa20.33■□□□□ 0.84
CHRD-202ENST00000348986 FUT2Q10981 343 aa20.32■□□□□ 0.84
CHRD-202ENST00000348986 SLC10A5Q5PT55 438 aa20.32■□□□□ 0.84
CHRD-202ENST00000348986 RASGRP4Q8TDF6 673 aa20.32■□□□□ 0.84
CHRD-202ENST00000348986 CEP131Q9UPN4 1083 aa20.32■□□□□ 0.84
CHRD-202ENST00000348986 SRPRBQ9Y5M8 271 aaKnown RBP20.32■□□□□ 0.84
CHRD-202ENST00000348986 AHDC1Q5TGY3 1603 aaPredicted RBP20.32■□□□□ 0.84
CHRD-202ENST00000348986 IKBKBO14920 756 aa20.32■□□□□ 0.84
CHRD-202ENST00000348986 PPP4R3BQ5MIZ7 849 aa20.32■□□□□ 0.84
CHRD-202ENST00000348986 E4F1Q66K89 784 aaPredicted RBP20.32■□□□□ 0.84
CHRD-202ENST00000348986 FAM196AQ6ZSG2 479 aa20.32■□□□□ 0.84
CHRD-202ENST00000348986 HOMER1Q86YM7 354 aa20.32■□□□□ 0.84
CHRD-202ENST00000348986 SYMPKQ92797 1274 aaKnown RBP20.32■□□□□ 0.84
CHRD-202ENST00000348986 ANKRD2Q9GZV1 360 aa20.32■□□□□ 0.84
CHRD-202ENST00000348986 OSBPL5Q9H0X9 879 aaPredicted RBP20.32■□□□□ 0.84
CHRD-202ENST00000348986 USP21Q9UK80 565 aa20.32■□□□□ 0.84
CHRD-202ENST00000348986 USP17L3A6NCW0 530 aa20.32■□□□□ 0.84
CHRD-202ENST00000348986 USP17L4A6NCW7 530 aa20.32■□□□□ 0.84
CHRD-202ENST00000348986 SPDYE4A6NLX3 237 aa20.32■□□□□ 0.84
CHRD-202ENST00000348986 MDM2Q00987 491 aaPredicted RBP20.32■□□□□ 0.84
CHRD-202ENST00000348986 USP17L1Q7RTZ2 530 aa20.32■□□□□ 0.84
CHRD-202ENST00000348986 PHF20Q9BVI0 1012 aa20.32■□□□□ 0.84
CHRD-202ENST00000348986 TMX1Q9H3N1 280 aa20.32■□□□□ 0.84
CHRD-202ENST00000348986 MKNK2Q9HBH9 465 aa20.32■□□□□ 0.84
CHRD-202ENST00000348986 BRMS1Q9HCU9 246 aa20.32■□□□□ 0.84
CHRD-202ENST00000348986 SAMSN1Q9NSI8 373 aaKnown RBP20.32■□□□□ 0.84
CHRD-202ENST00000348986 STX8Q9UNK0 236 aa20.32■□□□□ 0.84
CHRD-202ENST00000348986 CHD4Q14839 1912 aa20.31■□□□□ 0.84
CHRD-202ENST00000348986 TOP1P11387 765 aaKnown RBP20.31■□□□□ 0.84
CHRD-202ENST00000348986 TMTC3Q6ZXV5 915 aa20.31■□□□□ 0.84
CHRD-202ENST00000348986 SH3RF3Q8TEJ3 882 aaPredicted RBP20.31■□□□□ 0.84
CHRD-202ENST00000348986 TGFBRAP1Q8WUH2 860 aa20.31■□□□□ 0.84
CHRD-202ENST00000348986 PHLPP1O60346 1717 aa20.31■□□□□ 0.84
CHRD-202ENST00000348986 PRPF3O43395 683 aaKnown RBP20.31■□□□□ 0.84
CHRD-202ENST00000348986 PTGDRQ13258 359 aa20.31■□□□□ 0.84
CHRD-202ENST00000348986 PDCL2Q8N4E4 241 aa20.31■□□□□ 0.84
CHRD-202ENST00000348986 CPVLQ9H3G5 476 aa20.31■□□□□ 0.84
CHRD-202ENST00000348986 CNTNAP4Q9C0A0 1308 aa20.31■□□□□ 0.84
CHRD-202ENST00000348986 LDHBP07195 334 aaKnown RBP20.3■□□□□ 0.84
CHRD-202ENST00000348986 RASGRP2Q7LDG7 609 aa20.3■□□□□ 0.84
CHRD-202ENST00000348986 MAPKAPK5Q8IW41 473 aa20.3■□□□□ 0.84
CHRD-202ENST00000348986 IMPACTQ9P2X3 320 aa20.3■□□□□ 0.84
CHRD-202ENST00000348986 MTERF4Q7Z6M4 381 aaKnown RBP20.3■□□□□ 0.84
CHRD-202ENST00000348986 STAG2Q8N3U4 1231 aa20.3■□□□□ 0.84
CHRD-202ENST00000348986 BLZF1Q9H2G9 400 aa20.3■□□□□ 0.84
CHRD-202ENST00000348986 TM4SF1P30408 202 aa20.3■□□□□ 0.84
CHRD-202ENST00000348986 TRAPPC3LQ5T215 181 aa20.3■□□□□ 0.84
CHRD-202ENST00000348986 SYT10Q6XYQ8 523 aa20.3■□□□□ 0.84
CHRD-202ENST00000348986 KAT14Q9H8E8 782 aa20.3■□□□□ 0.84
CHRD-202ENST00000348986 DOCK2Q92608 1830 aa20.3■□□□□ 0.84
CHRD-202ENST00000348986 FAM237AA0A1B0GTK4 181 aa20.29■□□□□ 0.84
CHRD-202ENST00000348986 GOLGA8HP0CJ92 632 aa20.29■□□□□ 0.84
CHRD-202ENST00000348986 CBX1P83916 185 aa20.29■□□□□ 0.84
CHRD-202ENST00000348986 TTC38Q5R3I4 469 aa20.29■□□□□ 0.84
CHRD-202ENST00000348986 CCDC150Q8NCX0 1101 aa20.29■□□□□ 0.84
CHRD-202ENST00000348986 ACTN4O43707 911 aaKnown RBP20.29■□□□□ 0.84
CHRD-202ENST00000348986 NRDCO43847 1150 aa20.29■□□□□ 0.84
CHRD-202ENST00000348986 RBM28Q9NW13 759 aaKnown RBP20.29■□□□□ 0.84
CHRD-202ENST00000348986 PAXBP1Q9Y5B6 917 aa20.29■□□□□ 0.84
CHRD-202ENST00000348986 ARAP2Q8WZ64 1704 aa20.29■□□□□ 0.84
CHRD-202ENST00000348986 ADKP55263 362 aaKnown RBP20.28■□□□□ 0.84
CHRD-202ENST00000348986 VPS72Q15906 364 aa20.28■□□□□ 0.84
CHRD-202ENST00000348986 CNBD1Q8NA66 436 aa20.28■□□□□ 0.84
CHRD-202ENST00000348986 PPP1R13BQ96KQ4 1090 aa20.28■□□□□ 0.84
CHRD-202ENST00000348986 ATP8A2Q9NTI2 1148 aa20.28■□□□□ 0.84
CHRD-202ENST00000348986 ZNF215Q9UL58 517 aaPredicted RBP20.28■□□□□ 0.84
CHRD-202ENST00000348986 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.28■□□□□ 0.84
CHRD-202ENST00000348986 NCBP1Q09161 790 aaKnown RBP20.28■□□□□ 0.84
CHRD-202ENST00000348986 CNTNAP5Q8WYK1 1306 aa20.28■□□□□ 0.84
CHRD-202ENST00000348986 MTA3Q9BTC8 594 aa20.28■□□□□ 0.84
CHRD-202ENST00000348986 PRDM4Q9UKN5 801 aa20.28■□□□□ 0.84
CHRD-202ENST00000348986 ZHX1Q9UKY1 873 aaPredicted RBP20.28■□□□□ 0.84
CHRD-202ENST00000348986 CALM1P0DP23 149 aa20.27■□□□□ 0.84
CHRD-202ENST00000348986 CALM2P0DP24 149 aa20.27■□□□□ 0.84
CHRD-202ENST00000348986 CALM3P0DP25 149 aa20.27■□□□□ 0.84
CHRD-202ENST00000348986 SCG2P13521 617 aa20.27■□□□□ 0.84
CHRD-202ENST00000348986 NYAP1Q6ZVC0 841 aa20.27■□□□□ 0.84
CHRD-202ENST00000348986 CPLX3Q8WVH0 158 aa20.27■□□□□ 0.84
CHRD-202ENST00000348986 PLIN2Q99541 437 aa20.27■□□□□ 0.84
CHRD-202ENST00000348986 COL22A1Q8NFW1 1626 aaPredicted RBP20.27■□□□□ 0.84
CHRD-202ENST00000348986 SEMA3EO15041 775 aa20.27■□□□□ 0.84
CHRD-202ENST00000348986 KIF18AQ8NI77 898 aa20.27■□□□□ 0.84
CHRD-202ENST00000348986 INTS13Q9NVM9 706 aa20.27■□□□□ 0.84
CHRD-202ENST00000348986 MAPK8IP1Q9UQF2 711 aa20.27■□□□□ 0.84
CHRD-202ENST00000348986 MYH13Q9UKX3 1938 aa20.26■□□□□ 0.83
CHRD-202ENST00000348986 ECM29Q5VYK3 1845 aa20.26■□□□□ 0.83
CHRD-202ENST00000348986 CBFA2T2O43439 604 aa20.26■□□□□ 0.83
CHRD-202ENST00000348986 PNMA1Q8ND90 353 aa20.26■□□□□ 0.83
CHRD-202ENST00000348986 MED15Q96RN5 788 aa20.26■□□□□ 0.83
CHRD-202ENST00000348986 ARPP21Q9UBL0 812 aaPredicted RBP20.26■□□□□ 0.83
CHRD-202ENST00000348986 CACNA1SQ13698 1873 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms