RNA–Protein interactions for RNA: ENST00000337339.6

MSL3-202, Transcript of MSL complex subunit 3, humanhuman

TSL 2 BASIC

Gene MSL3, Length 3,446 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-202ENST00000337339 DESI2Q9BSY9 194 aa11.07□□□□□ -0.64
MSL3-202ENST00000337339 CCDC94Q9BW85 323 aaPredicted RBP11.07□□□□□ -0.64
MSL3-202ENST00000337339 RNF26Q9BY78 433 aaPredicted RBP11.07□□□□□ -0.64
MSL3-202ENST00000337339 TJP1Q07157 1748 aa11.07□□□□□ -0.64
MSL3-202ENST00000337339 CCT6AP40227 531 aaKnown RBP11.07□□□□□ -0.64
MSL3-202ENST00000337339 NCBP1Q09161 790 aaKnown RBP11.07□□□□□ -0.64
MSL3-202ENST00000337339 MEX3CQ5U5Q3 659 aaKnown RBP11.07□□□□□ -0.64
MSL3-202ENST00000337339 SRBD1Q8N5C6 995 aaKnown RBP11.07□□□□□ -0.64
MSL3-202ENST00000337339 ZNF384Q8TF68 577 aa11.07□□□□□ -0.64
MSL3-202ENST00000337339 PPP1R13BQ96KQ4 1090 aa11.07□□□□□ -0.64
MSL3-202ENST00000337339 SPATA31A5Q5VU36 1347 aa11.07□□□□□ -0.64
MSL3-202ENST00000337339 SPATA31A7Q8IWB4 1347 aa11.07□□□□□ -0.64
MSL3-202ENST00000337339 ATP2B2Q01814 1243 aa11.07□□□□□ -0.64
MSL3-202ENST00000337339 NFIXQ14938 502 aa11.07□□□□□ -0.64
MSL3-202ENST00000337339 KARSQ15046 597 aaKnown RBP11.07□□□□□ -0.64
MSL3-202ENST00000337339 ARHGEF1Q92888 912 aaKnown RBP11.07□□□□□ -0.64
MSL3-202ENST00000337339 NYXQ9GZU5 481 aa11.07□□□□□ -0.64
MSL3-202ENST00000337339 ZSWIM4Q9H7M6 989 aa11.07□□□□□ -0.64
MSL3-202ENST00000337339 IMPACTQ9P2X3 320 aa11.07□□□□□ -0.64
MSL3-202ENST00000337339 DACH1Q9UI36 760 aa11.07□□□□□ -0.64
MSL3-202ENST00000337339 TUBE1Q9UJT0 475 aa11.07□□□□□ -0.64
MSL3-202ENST00000337339 THRAP3Q9Y2W1 955 aaKnown RBP11.07□□□□□ -0.64
MSL3-202ENST00000337339 LAMB4A4D0S4 1761 aa11.07□□□□□ -0.64
MSL3-202ENST00000337339 C6orf229H3BNL8 230 aa11.06□□□□□ -0.64
MSL3-202ENST00000337339 SEC23AQ15436 765 aa11.06□□□□□ -0.64
MSL3-202ENST00000337339 MNS1Q8NEH6 495 aa11.06□□□□□ -0.64
MSL3-202ENST00000337339 SRPRBQ9Y5M8 271 aaKnown RBP11.06□□□□□ -0.64
MSL3-202ENST00000337339 IKBKBO14920 756 aa11.06□□□□□ -0.64
MSL3-202ENST00000337339 EIF6P56537 245 aaKnown RBP11.06□□□□□ -0.64
MSL3-202ENST00000337339 TROAPQ12815 778 aa11.06□□□□□ -0.64
MSL3-202ENST00000337339 SF3B3Q15393 1217 aaKnown RBP11.06□□□□□ -0.64
MSL3-202ENST00000337339 RRAGBQ5VZM2 374 aa11.06□□□□□ -0.64
MSL3-202ENST00000337339 STK36Q9NRP7 1315 aa11.06□□□□□ -0.64
MSL3-202ENST00000337339 CCDC194A0A1B0GVG4 234 aa11.06□□□□□ -0.64
MSL3-202ENST00000337339 GNG11P61952 73 aa11.06□□□□□ -0.64
MSL3-202ENST00000337339 PKN1Q16512 942 aa11.06□□□□□ -0.64
MSL3-202ENST00000337339 FAM196AQ6ZSG2 479 aa11.06□□□□□ -0.64
MSL3-202ENST00000337339 PPFIBP1Q86W92 1011 aa11.06□□□□□ -0.64
MSL3-202ENST00000337339 STAG2Q8N3U4 1231 aa11.06□□□□□ -0.64
MSL3-202ENST00000337339 RPGRQ92834 1020 aaKnown RBP11.06□□□□□ -0.64
MSL3-202ENST00000337339 UIMC1Q96RL1 719 aa11.06□□□□□ -0.64
MSL3-202ENST00000337339 ABCC6O95255 1503 aa11.06□□□□□ -0.64
MSL3-202ENST00000337339 RIMBP2O15034 1052 aa11.05□□□□□ -0.64
MSL3-202ENST00000337339 PICALMQ13492 652 aa11.05□□□□□ -0.64
MSL3-202ENST00000337339 ERCC6LQ2NKX8 1250 aa11.05□□□□□ -0.64
MSL3-202ENST00000337339 TRAPPC3LQ5T215 181 aa11.05□□□□□ -0.64
MSL3-202ENST00000337339 AMIGO3Q86WK7 504 aa11.05□□□□□ -0.64
MSL3-202ENST00000337339 PNMA1Q8ND90 353 aa11.05□□□□□ -0.64
MSL3-202ENST00000337339 ANKRD2Q9GZV1 360 aa11.05□□□□□ -0.64
MSL3-202ENST00000337339 OSBPL5Q9H0X9 879 aaPredicted RBP11.05□□□□□ -0.64
MSL3-202ENST00000337339 GTF2F1P35269 517 aaKnown RBP eCLIP11.05□□□□□ -0.64
MSL3-202ENST00000337339 RASGRP2Q7LDG7 609 aa11.05□□□□□ -0.64
MSL3-202ENST00000337339 CNBD1Q8NA66 436 aa11.05□□□□□ -0.64
MSL3-202ENST00000337339 SH3RF3Q8TEJ3 882 aaPredicted RBP11.05□□□□□ -0.64
MSL3-202ENST00000337339 BAG1Q99933 345 aaPredicted RBP11.05□□□□□ -0.64
MSL3-202ENST00000337339 BPIFA3Q9BQP9 254 aa11.05□□□□□ -0.64
MSL3-202ENST00000337339 LZTFL1Q9NQ48 299 aa11.05□□□□□ -0.64
MSL3-202ENST00000337339 LAMA4Q16363 1823 aa11.05□□□□□ -0.64
MSL3-202ENST00000337339 A0A087X0B3 334 aa11.05□□□□□ -0.64
MSL3-202ENST00000337339 TOM1O60784 492 aa11.05□□□□□ -0.64
MSL3-202ENST00000337339 SCG2P13521 617 aa11.05□□□□□ -0.64
MSL3-202ENST00000337339 KIF5BP33176 963 aa11.05□□□□□ -0.64
MSL3-202ENST00000337339 MLKLQ8NB16 471 aa11.05□□□□□ -0.64
MSL3-202ENST00000337339 BRIP1Q9BX63 1249 aa11.05□□□□□ -0.64
MSL3-202ENST00000337339 VPS16Q9H269 839 aa11.05□□□□□ -0.64
MSL3-202ENST00000337339 RBM28Q9NW13 759 aaKnown RBP11.05□□□□□ -0.64
MSL3-202ENST00000337339 NARFQ9UHQ1 456 aa11.05□□□□□ -0.64
MSL3-202ENST00000337339 CTNND2Q9UQB3 1225 aa11.05□□□□□ -0.64
MSL3-202ENST00000337339 DISP2A7MBM2 1401 aa11.04□□□□□ -0.64
MSL3-202ENST00000337339 PRPF3O43395 683 aaKnown RBP11.04□□□□□ -0.64
MSL3-202ENST00000337339 SLU7O95391 586 aaKnown RBP11.04□□□□□ -0.64
MSL3-202ENST00000337339 CALM1P0DP23 149 aa11.04□□□□□ -0.64
MSL3-202ENST00000337339 CALM2P0DP24 149 aa11.04□□□□□ -0.64
MSL3-202ENST00000337339 CALM3P0DP25 149 aa11.04□□□□□ -0.64
MSL3-202ENST00000337339 KANK3Q6NY19 840 aa11.04□□□□□ -0.64
MSL3-202ENST00000337339 TMTC3Q6ZXV5 915 aa11.04□□□□□ -0.64
MSL3-202ENST00000337339 SHISA4Q96DD7 197 aa11.04□□□□□ -0.64
MSL3-202ENST00000337339 USP21Q9UK80 565 aa11.04□□□□□ -0.64
MSL3-202ENST00000337339 NUP188Q5SRE5 1749 aa11.04□□□□□ -0.64
MSL3-202ENST00000337339 ATRNO75882 1429 aa11.04□□□□□ -0.64
MSL3-202ENST00000337339 ADAMTS3O15072 1205 aa11.04□□□□□ -0.64
MSL3-202ENST00000337339 TEX33O43247 280 aa11.04□□□□□ -0.64
MSL3-202ENST00000337339 UFL1O94874 794 aa11.04□□□□□ -0.64
MSL3-202ENST00000337339 BAG3O95817 575 aa11.04□□□□□ -0.64
MSL3-202ENST00000337339 GRIK5Q16478 980 aa11.04□□□□□ -0.64
MSL3-202ENST00000337339 FBXO33Q7Z6M2 555 aa11.04□□□□□ -0.64
MSL3-202ENST00000337339 PAGE5Q96GU1 130 aa11.04□□□□□ -0.64
MSL3-202ENST00000337339 TOGARAM1Q9Y4F4 1720 aa11.04□□□□□ -0.64
MSL3-202ENST00000337339 PP2D1A8MPX8 630 aa11.03□□□□□ -0.64
MSL3-202ENST00000337339 G3V3G9 751 aa11.03□□□□□ -0.64
MSL3-202ENST00000337339 TXLNAP40222 546 aa11.03□□□□□ -0.64
MSL3-202ENST00000337339 INF2Q27J81 1249 aa11.03□□□□□ -0.64
MSL3-202ENST00000337339 FILIP1LQ4L180 1135 aa11.03□□□□□ -0.64
MSL3-202ENST00000337339 DCAF8Q5TAQ9 597 aa11.03□□□□□ -0.64
MSL3-202ENST00000337339 VSTM4Q8IW00 320 aa11.03□□□□□ -0.64
MSL3-202ENST00000337339 HSD3B7Q9H2F3 369 aa11.03□□□□□ -0.64
MSL3-202ENST00000337339 N4BP3O15049 544 aa11.03□□□□□ -0.64
MSL3-202ENST00000337339 RPS6KA4O75676 772 aa11.03□□□□□ -0.64
MSL3-202ENST00000337339 TMEM132AQ24JP5 1023 aa11.03□□□□□ -0.64
MSL3-202ENST00000337339 SPTY2D1Q68D10 685 aaPredicted RBP11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms