RNA–Protein interactions for RNA: ENST00000312849.4

LSMEM1-201, Transcript of leucine rich single-pass membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSMEM1, Length 1,870 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1-201ENST00000312849 H2AFXP16104 143 aaPredicted RBP11□□□□□ -0.65
LSMEM1-201ENST00000312849 FUT2Q10981 343 aa11□□□□□ -0.65
LSMEM1-201ENST00000312849 BMS1Q14692 1282 aaKnown RBP11□□□□□ -0.65
LSMEM1-201ENST00000312849 SPECC1Q5M775 1068 aa11□□□□□ -0.65
LSMEM1-201ENST00000312849 SPATA1Q5VX52 437 aa11□□□□□ -0.65
LSMEM1-201ENST00000312849 SH3RF1Q7Z6J0 888 aa11□□□□□ -0.65
LSMEM1-201ENST00000312849 ENAHQ8N8S7 591 aaPredicted RBP11□□□□□ -0.65
LSMEM1-201ENST00000312849 GSDMAQ96QA5 445 aa11□□□□□ -0.65
LSMEM1-201ENST00000312849 PANX2Q96RD6 677 aa11□□□□□ -0.65
LSMEM1-201ENST00000312849 CTAGE1Q96RT6 745 aa11□□□□□ -0.65
LSMEM1-201ENST00000312849 RIOK1Q9BRS2 568 aaKnown RBP11□□□□□ -0.65
LSMEM1-201ENST00000312849 NAA15Q9BXJ9 866 aaKnown RBP11□□□□□ -0.65
LSMEM1-201ENST00000312849 INTS13Q9NVM9 706 aa11□□□□□ -0.65
LSMEM1-201ENST00000312849 BSDC1Q9NW68 430 aaPredicted RBP11□□□□□ -0.65
LSMEM1-201ENST00000312849 ARGLU1Q9NWB6 273 aaPredicted RBP11□□□□□ -0.65
LSMEM1-201ENST00000312849 PPP2R2CQ9Y2T4 447 aa11□□□□□ -0.65
LSMEM1-201ENST00000312849 NRAPQ86VF7 1730 aa11□□□□□ -0.65
LSMEM1-201ENST00000312849 ORC4O43929 436 aa11□□□□□ -0.65
LSMEM1-201ENST00000312849 TRAPPC10P48553 1259 aa11□□□□□ -0.65
LSMEM1-201ENST00000312849 GRIN1Q05586 938 aa11□□□□□ -0.65
LSMEM1-201ENST00000312849 NR1I3Q14994 352 aa11□□□□□ -0.65
LSMEM1-201ENST00000312849 PKN1Q16512 942 aa11□□□□□ -0.65
LSMEM1-201ENST00000312849 DDB1Q16531 1140 aa11□□□□□ -0.65
LSMEM1-201ENST00000312849 FBXO38Q6PIJ6 1188 aa11□□□□□ -0.65
LSMEM1-201ENST00000312849 PIAS4Q8N2W9 510 aaPredicted RBP11□□□□□ -0.65
LSMEM1-201ENST00000312849 CCDC82Q8N4S0 544 aa11□□□□□ -0.65
LSMEM1-201ENST00000312849 MNS1Q8NEH6 495 aa11□□□□□ -0.65
LSMEM1-201ENST00000312849 OXER1Q8TDS5 423 aa11□□□□□ -0.65
LSMEM1-201ENST00000312849 ABCF2Q9UG63 623 aa11□□□□□ -0.65
LSMEM1-201ENST00000312849 ROBO1Q9Y6N7 1651 aa10.99□□□□□ -0.65
LSMEM1-201ENST00000312849 KIAA1551Q9HCM1 1747 aa10.99□□□□□ -0.65
LSMEM1-201ENST00000312849 A0A1B0GTH6 734 aa10.99□□□□□ -0.65
LSMEM1-201ENST00000312849 FMR1Q06787 632 aaKnown RBP eCLIP10.99□□□□□ -0.65
LSMEM1-201ENST00000312849 FILIP1LQ4L180 1135 aa10.99□□□□□ -0.65
LSMEM1-201ENST00000312849 TMTC3Q6ZXV5 915 aa10.99□□□□□ -0.65
LSMEM1-201ENST00000312849 CREBRFQ8IUR6 639 aa10.99□□□□□ -0.65
LSMEM1-201ENST00000312849 PDILTQ8N807 584 aa10.99□□□□□ -0.65
LSMEM1-201ENST00000312849 TC2NQ8N9U0 490 aa10.99□□□□□ -0.65
LSMEM1-201ENST00000312849 SDR42E1Q8WUS8 393 aa10.99□□□□□ -0.65
LSMEM1-201ENST00000312849 UBXN4Q92575 508 aa10.99□□□□□ -0.65
LSMEM1-201ENST00000312849 EFCAB8A8MWE9 144 aa10.98□□□□□ -0.65
LSMEM1-201ENST00000312849 AKR1B15C9JRZ8 316 aaPredicted RBP10.98□□□□□ -0.65
LSMEM1-201ENST00000312849 ADRA2BP18089 450 aa10.98□□□□□ -0.65
LSMEM1-201ENST00000312849 CASQ1P31415 396 aa10.98□□□□□ -0.65
LSMEM1-201ENST00000312849 SLC10A5Q5PT55 438 aa10.98□□□□□ -0.65
LSMEM1-201ENST00000312849 TTC38Q5R3I4 469 aa10.98□□□□□ -0.65
LSMEM1-201ENST00000312849 ADGRA1Q86SQ6 560 aa10.98□□□□□ -0.65
LSMEM1-201ENST00000312849 CTCFLQ8NI51 663 aaPredicted RBP10.98□□□□□ -0.65
LSMEM1-201ENST00000312849 PAGE5Q96GU1 130 aa10.98□□□□□ -0.65
LSMEM1-201ENST00000312849 VPS54Q9P1Q0 977 aa10.98□□□□□ -0.65
LSMEM1-201ENST00000312849 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.98□□□□□ -0.65
LSMEM1-201ENST00000312849 V9GY48 417 aaPredicted RBP10.98□□□□□ -0.65
LSMEM1-201ENST00000312849 V9GYY5 206 aaPredicted RBP10.98□□□□□ -0.65
LSMEM1-201ENST00000312849 SPATA31A1Q5TZJ5 1347 aa10.98□□□□□ -0.65
LSMEM1-201ENST00000312849 VWA3AA6NCI4 1184 aa10.98□□□□□ -0.65
LSMEM1-201ENST00000312849 ATP8B1O43520 1251 aa10.98□□□□□ -0.65
LSMEM1-201ENST00000312849 URI1O94763 535 aaPredicted RBP10.98□□□□□ -0.65
LSMEM1-201ENST00000312849 ATP2B1P20020 1258 aa10.98□□□□□ -0.65
LSMEM1-201ENST00000312849 GYG1P46976 350 aa10.98□□□□□ -0.65
LSMEM1-201ENST00000312849 ATP2C1P98194 919 aaPredicted RBP10.98□□□□□ -0.65
LSMEM1-201ENST00000312849 TROAPQ12815 778 aa10.98□□□□□ -0.65
LSMEM1-201ENST00000312849 ITPK1Q13572 414 aa10.98□□□□□ -0.65
LSMEM1-201ENST00000312849 ERCC6LQ2NKX8 1250 aa10.98□□□□□ -0.65
LSMEM1-201ENST00000312849 FBXO33Q7Z6M2 555 aa10.98□□□□□ -0.65
LSMEM1-201ENST00000312849 PPFIBP1Q86W92 1011 aa10.98□□□□□ -0.65
LSMEM1-201ENST00000312849 CMTR1Q8N1G2 835 aaKnown RBP10.98□□□□□ -0.65
LSMEM1-201ENST00000312849 TNFRSF25Q93038 417 aa10.98□□□□□ -0.65
LSMEM1-201ENST00000312849 DHX58Q96C10 678 aa10.98□□□□□ -0.65
LSMEM1-201ENST00000312849 CCDC51Q96ER9 411 aa10.98□□□□□ -0.65
LSMEM1-201ENST00000312849 CRNKL1Q9BZJ0 848 aaKnown RBP10.98□□□□□ -0.65
LSMEM1-201ENST00000312849 ATP8A2Q9NTI2 1148 aa10.98□□□□□ -0.65
LSMEM1-201ENST00000312849 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.98□□□□□ -0.65
LSMEM1-201ENST00000312849 SYNRGQ9UMZ2 1314 aa10.97□□□□□ -0.65
LSMEM1-201ENST00000312849 TADA3O75528 432 aa10.97□□□□□ -0.65
LSMEM1-201ENST00000312849 CALML3P27482 149 aa10.97□□□□□ -0.65
LSMEM1-201ENST00000312849 DPYDQ12882 1025 aa10.97□□□□□ -0.65
LSMEM1-201ENST00000312849 SEMA3FQ13275 785 aa10.97□□□□□ -0.65
LSMEM1-201ENST00000312849 CUL4BQ13620 913 aa10.97□□□□□ -0.65
LSMEM1-201ENST00000312849 TUBB2AQ13885 445 aa10.97□□□□□ -0.65
LSMEM1-201ENST00000312849 SBK1Q52WX2 424 aa10.97□□□□□ -0.65
LSMEM1-201ENST00000312849 CDKAL1Q5VV42 579 aa10.97□□□□□ -0.65
LSMEM1-201ENST00000312849 CTR9Q6PD62 1173 aa10.97□□□□□ -0.65
LSMEM1-201ENST00000312849 IQUBQ8NA54 791 aa10.97□□□□□ -0.65
LSMEM1-201ENST00000312849 SYMPKQ92797 1274 aaKnown RBP10.97□□□□□ -0.65
LSMEM1-201ENST00000312849 TUBB2BQ9BVA1 445 aa10.97□□□□□ -0.65
LSMEM1-201ENST00000312849 MINPP1Q9UNW1 487 aa10.97□□□□□ -0.65
LSMEM1-201ENST00000312849 PARP3Q9Y6F1 533 aa10.97□□□□□ -0.65
LSMEM1-201ENST00000312849 COL1A1P02452 1464 aaPredicted RBP10.97□□□□□ -0.65
LSMEM1-201ENST00000312849 CNTNAP5Q8WYK1 1306 aa10.97□□□□□ -0.65
LSMEM1-201ENST00000312849 CCDC175P0C221 793 aa10.96□□□□□ -0.65
LSMEM1-201ENST00000312849 KIF5BP33176 963 aa10.96□□□□□ -0.65
LSMEM1-201ENST00000312849 TUBB4BP68371 445 aa10.96□□□□□ -0.65
LSMEM1-201ENST00000312849 MAP3K9P80192 1104 aa10.96□□□□□ -0.65
LSMEM1-201ENST00000312849 SPAG1Q07617 926 aa10.96□□□□□ -0.65
LSMEM1-201ENST00000312849 ARHGAP29Q52LW3 1261 aa10.96□□□□□ -0.65
LSMEM1-201ENST00000312849 CCDC178Q5BJE1 867 aa10.96□□□□□ -0.65
LSMEM1-201ENST00000312849 USP49Q70CQ1 688 aa10.96□□□□□ -0.65
LSMEM1-201ENST00000312849 TRMT44Q8IYL2 757 aaKnown RBP10.96□□□□□ -0.65
LSMEM1-201ENST00000312849 GRAMD1CQ8IYS0 662 aa10.96□□□□□ -0.65
LSMEM1-201ENST00000312849 FAM177A1Q8N128 213 aaPredicted RBP10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms