RNA–Protein interactions for RNA: ENST00000260359.10

NUSAP1-201, Transcript of nucleolar and spindle associated protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NUSAP1, Length 2,409 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUSAP1-201ENST00000260359 ZNF287Q9HBT7 754 aa11.72□□□□□ -0.53
NUSAP1-201ENST00000260359 ZNF70Q9UC06 446 aaPredicted RBP11.72□□□□□ -0.53
NUSAP1-201ENST00000260359 MYO3BQ8WXR4 1341 aa11.72□□□□□ -0.53
NUSAP1-201ENST00000260359 GABPAQ06546 454 aa11.71□□□□□ -0.53
NUSAP1-201ENST00000260359 PNMA1Q8ND90 353 aa11.71□□□□□ -0.53
NUSAP1-201ENST00000260359 CPVLQ9H3G5 476 aa11.71□□□□□ -0.53
NUSAP1-201ENST00000260359 DNAJC18Q9H819 358 aa11.71□□□□□ -0.53
NUSAP1-201ENST00000260359 ZNF541Q9H0D2 1346 aa11.71□□□□□ -0.53
NUSAP1-201ENST00000260359 ZNF646O15015 1829 aaPredicted RBP11.71□□□□□ -0.53
NUSAP1-201ENST00000260359 SHMT1P34896 483 aa11.71□□□□□ -0.54
NUSAP1-201ENST00000260359 GMPSP49915 693 aaPredicted RBP11.71□□□□□ -0.54
NUSAP1-201ENST00000260359 FER1L6Q2WGJ9 1857 aa11.71□□□□□ -0.54
NUSAP1-201ENST00000260359 TBC1D10BQ4KMP7 808 aaPredicted RBP11.71□□□□□ -0.54
NUSAP1-201ENST00000260359 DDX60LQ5H9U9 1706 aaKnown RBP11.71□□□□□ -0.54
NUSAP1-201ENST00000260359 CLEC17AQ6ZS10 378 aa11.71□□□□□ -0.54
NUSAP1-201ENST00000260359 USP48Q86UV5 1035 aa11.71□□□□□ -0.54
NUSAP1-201ENST00000260359 STAG2Q8N3U4 1231 aa11.71□□□□□ -0.54
NUSAP1-201ENST00000260359 TMEM47Q9BQJ4 181 aa11.71□□□□□ -0.54
NUSAP1-201ENST00000260359 IDI2Q9BXS1 227 aa11.71□□□□□ -0.54
NUSAP1-201ENST00000260359 TRIM34Q9BYJ4 488 aa11.71□□□□□ -0.54
NUSAP1-201ENST00000260359 LMBRD1Q9NUN5 540 aa11.71□□□□□ -0.54
NUSAP1-201ENST00000260359 TMOD2Q9NZR1 351 aa11.71□□□□□ -0.54
NUSAP1-201ENST00000260359 BAZ2BQ9UIF8 2168 aaKnown RBP11.71□□□□□ -0.54
NUSAP1-201ENST00000260359 KIF3AQ9Y496 699 aa11.71□□□□□ -0.54
NUSAP1-201ENST00000260359 ASTN2O75129 1339 aaPredicted RBP11.71□□□□□ -0.54
NUSAP1-201ENST00000260359 WNT10BO00744 389 aa11.7□□□□□ -0.54
NUSAP1-201ENST00000260359 GADD45BO75293 160 aaPredicted RBP11.7□□□□□ -0.54
NUSAP1-201ENST00000260359 CDKL5O76039 1030 aa11.7□□□□□ -0.54
NUSAP1-201ENST00000260359 GDF11O95390 407 aa11.7□□□□□ -0.54
NUSAP1-201ENST00000260359 TNIP1Q15025 636 aa11.7□□□□□ -0.54
NUSAP1-201ENST00000260359 LRRC47Q8N1G4 583 aaKnown RBP11.7□□□□□ -0.54
NUSAP1-201ENST00000260359 AGBL3Q8NEM8 1001 aa11.7□□□□□ -0.54
NUSAP1-201ENST00000260359 CSRNP1Q96S65 589 aa11.7□□□□□ -0.54
NUSAP1-201ENST00000260359 MTA3Q9BTC8 594 aa11.7□□□□□ -0.54
NUSAP1-201ENST00000260359 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.7□□□□□ -0.54
NUSAP1-201ENST00000260359 FTOQ9C0B1 505 aaKnown RBP eCLIP11.7□□□□□ -0.54
NUSAP1-201ENST00000260359 TMEM39BQ9GZU3 492 aa11.7□□□□□ -0.54
NUSAP1-201ENST00000260359 MYOZ2Q9NPC6 264 aa11.7□□□□□ -0.54
NUSAP1-201ENST00000260359 DDX49Q9Y6V7 483 aaKnown RBP11.7□□□□□ -0.54
NUSAP1-201ENST00000260359 V9GY48 417 aaPredicted RBP11.7□□□□□ -0.54
NUSAP1-201ENST00000260359 MIGA2Q7L4E1 593 aa11.7□□□□□ -0.54
NUSAP1-201ENST00000260359 NBPF11Q86T75 865 aa11.7□□□□□ -0.54
NUSAP1-201ENST00000260359 MICALL2Q8IY33 904 aa11.7□□□□□ -0.54
NUSAP1-201ENST00000260359 NEDD1Q8NHV4 660 aa11.7□□□□□ -0.54
NUSAP1-201ENST00000260359 CTCFLQ8NI51 663 aaPredicted RBP11.7□□□□□ -0.54
NUSAP1-201ENST00000260359 PI4KBQ9UBF8 816 aa11.7□□□□□ -0.54
NUSAP1-201ENST00000260359 KCNJ14Q9UNX9 436 aa11.7□□□□□ -0.54
NUSAP1-201ENST00000260359 TCHHQ07283 1943 aa11.69□□□□□ -0.54
NUSAP1-201ENST00000260359 FMNL1O95466 1100 aaPredicted RBP11.69□□□□□ -0.54
NUSAP1-201ENST00000260359 IFNAR1P17181 557 aa11.69□□□□□ -0.54
NUSAP1-201ENST00000260359 RESTQ13127 1097 aa11.69□□□□□ -0.54
NUSAP1-201ENST00000260359 DGKHQ86XP1 1220 aa11.69□□□□□ -0.54
NUSAP1-201ENST00000260359 TRIM22Q8IYM9 498 aa11.69□□□□□ -0.54
NUSAP1-201ENST00000260359 SRBD1Q8N5C6 995 aaKnown RBP11.69□□□□□ -0.54
NUSAP1-201ENST00000260359 CLIP2Q9UDT6 1046 aa11.69□□□□□ -0.54
NUSAP1-201ENST00000260359 CNOT7Q9UIV1 285 aaKnown RBP11.69□□□□□ -0.54
NUSAP1-201ENST00000260359 ATP6V1DQ9Y5K8 247 aa11.69□□□□□ -0.54
NUSAP1-201ENST00000260359 CCDC196A0A1B0GTZ2 297 aa11.69□□□□□ -0.54
NUSAP1-201ENST00000260359 YBX3P16989 372 aaKnown RBP eCLIP11.69□□□□□ -0.544e-7■■■□□ 18.9
NUSAP1-201ENST00000260359 USP17L2Q6R6M4 530 aa11.69□□□□□ -0.54
NUSAP1-201ENST00000260359 ISY1Q9ULR0 285 aaKnown RBP11.69□□□□□ -0.54
NUSAP1-201ENST00000260359 KIF28PB7ZC32 967 aa11.68□□□□□ -0.54
NUSAP1-201ENST00000260359 FZD9O00144 591 aa11.68□□□□□ -0.54
NUSAP1-201ENST00000260359 VEGFAP15692 232 aaPredicted RBP11.68□□□□□ -0.54
NUSAP1-201ENST00000260359 AKAP17AQ02040 695 aaKnown RBP11.68□□□□□ -0.54
NUSAP1-201ENST00000260359 SPDYE2Q495Y8 402 aa11.68□□□□□ -0.54
NUSAP1-201ENST00000260359 CERKLQ49MI3 558 aaPredicted RBP11.68□□□□□ -0.54
NUSAP1-201ENST00000260359 KRT40Q6A162 431 aa11.68□□□□□ -0.54
NUSAP1-201ENST00000260359 FBXO18Q8NFZ0 1043 aa11.68□□□□□ -0.54
NUSAP1-201ENST00000260359 DHX36Q9H2U1 1008 aaKnown RBP11.68□□□□□ -0.54
NUSAP1-201ENST00000260359 MYO1BO43795 1136 aa11.68□□□□□ -0.54
NUSAP1-201ENST00000260359 DDAH1O94760 285 aa11.68□□□□□ -0.54
NUSAP1-201ENST00000260359 RRP1BQ14684 758 aaKnown RBP11.68□□□□□ -0.54
NUSAP1-201ENST00000260359 GPT2Q8TD30 523 aa11.68□□□□□ -0.54
NUSAP1-201ENST00000260359 VAT1LQ9HCJ6 419 aa11.68□□□□□ -0.54
NUSAP1-201ENST00000260359 TCP11L1Q9NUJ3 509 aa11.68□□□□□ -0.54
NUSAP1-201ENST00000260359 MTMR4Q9NYA4 1195 aa11.68□□□□□ -0.54
NUSAP1-201ENST00000260359 VPS54Q9P1Q0 977 aa11.68□□□□□ -0.54
NUSAP1-201ENST00000260359 RBM27Q9P2N5 1060 aaKnown RBP11.68□□□□□ -0.54
NUSAP1-201ENST00000260359 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.68□□□□□ -0.54
NUSAP1-201ENST00000260359 FRMPD2Q68DX3 1309 aaPredicted RBP11.68□□□□□ -0.54
NUSAP1-201ENST00000260359 CALM1P0DP23 149 aa11.67□□□□□ -0.54
NUSAP1-201ENST00000260359 CALM2P0DP24 149 aa11.67□□□□□ -0.54
NUSAP1-201ENST00000260359 CALM3P0DP25 149 aa11.67□□□□□ -0.54
NUSAP1-201ENST00000260359 JAG1P78504 1218 aa11.67□□□□□ -0.54
NUSAP1-201ENST00000260359 GNL2Q13823 731 aaKnown RBP11.67□□□□□ -0.54
NUSAP1-201ENST00000260359 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.67□□□□□ -0.546e-6■■■□□ 15.9
NUSAP1-201ENST00000260359 SWAP70Q9UH65 585 aa11.67□□□□□ -0.54
NUSAP1-201ENST00000260359 FOCADQ5VW36 1801 aa11.67□□□□□ -0.54
NUSAP1-201ENST00000260359 ECM29Q5VYK3 1845 aa11.67□□□□□ -0.54
NUSAP1-201ENST00000260359 USP17L5A8MUK1 530 aa11.67□□□□□ -0.54
NUSAP1-201ENST00000260359 ENTPD3O75355 529 aa11.67□□□□□ -0.54
NUSAP1-201ENST00000260359 TRIM29Q14134 588 aa11.67□□□□□ -0.54
NUSAP1-201ENST00000260359 SEPT2Q15019 361 aa11.67□□□□□ -0.54
NUSAP1-201ENST00000260359 PRAMEF18Q5VWM3 479 aa11.67□□□□□ -0.54
NUSAP1-201ENST00000260359 TMTC3Q6ZXV5 915 aa11.67□□□□□ -0.54
NUSAP1-201ENST00000260359 RNF181Q9P0P0 153 aa11.67□□□□□ -0.54
NUSAP1-201ENST00000260359 MAD2L2Q9UI95 211 aa11.67□□□□□ -0.54
NUSAP1-201ENST00000260359 LTBP3Q9NS15 1303 aa11.67□□□□□ -0.54
NUSAP1-201ENST00000260359 CNTNAP1P78357 1384 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms