RNA–Protein interactions for RNA: ENST00000234256.3

SLC1A4-201, Transcript of solute carrier family 1 member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC1A4, Length 4,561 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A4-201ENST00000234256 NR5A1Q13285 461 aa19.16■□□□□ 0.66
SLC1A4-201ENST00000234256 HMGB2P26583 209 aaKnown RBP19.15■□□□□ 0.66
SLC1A4-201ENST00000234256 C8orf74Q6P047 294 aa19.15■□□□□ 0.66
SLC1A4-201ENST00000234256 SMYD4Q8IYR2 804 aaPredicted RBP19.15■□□□□ 0.66
SLC1A4-201ENST00000234256 GRAMD1CQ8IYS0 662 aa19.15■□□□□ 0.66
SLC1A4-201ENST00000234256 FNBP4Q8N3X1 1017 aaPredicted RBP19.15■□□□□ 0.66
SLC1A4-201ENST00000234256 ZMYM6O95789 1325 aa19.15■□□□□ 0.66
SLC1A4-201ENST00000234256 RPL13P26373 211 aaKnown RBP19.15■□□□□ 0.66
SLC1A4-201ENST00000234256 ACTN2P35609 894 aa19.15■□□□□ 0.66
SLC1A4-201ENST00000234256 POLA2Q14181 598 aa19.15■□□□□ 0.66
SLC1A4-201ENST00000234256 PPP2R5BQ15173 497 aa19.15■□□□□ 0.66
SLC1A4-201ENST00000234256 USH1GQ495M9 461 aa19.15■□□□□ 0.66
SLC1A4-201ENST00000234256 REXO1Q8N1G1 1221 aaKnown RBP19.15■□□□□ 0.66
SLC1A4-201ENST00000234256 PNMA1Q8ND90 353 aa19.15■□□□□ 0.66
SLC1A4-201ENST00000234256 FAM76AQ8TAV0 307 aa19.15■□□□□ 0.66
SLC1A4-201ENST00000234256 RTEL1Q9NZ71 1219 aa19.15■□□□□ 0.66
SLC1A4-201ENST00000234256 TUBBP07437 444 aa19.15■□□□□ 0.66
SLC1A4-201ENST00000234256 PTPROQ16827 1216 aa19.15■□□□□ 0.66
SLC1A4-201ENST00000234256 TYW1BQ6NUM6 668 aa19.15■□□□□ 0.66
SLC1A4-201ENST00000234256 KIAA1524Q8TCG1 905 aa19.15■□□□□ 0.66
SLC1A4-201ENST00000234256 SMCO2A6NFE2 343 aa19.15■□□□□ 0.66
SLC1A4-201ENST00000234256 SLC39A14Q15043 492 aa19.15■□□□□ 0.66
SLC1A4-201ENST00000234256 RCOR1Q9UKL0 485 aa19.15■□□□□ 0.66
SLC1A4-201ENST00000234256 ATP6V0A2Q9Y487 856 aa19.15■□□□□ 0.66
SLC1A4-201ENST00000234256 ZFYVE16Q7Z3T8 1539 aa19.14■□□□□ 0.66
SLC1A4-201ENST00000234256 NCAPH2Q6IBW4 605 aa19.14■□□□□ 0.66
SLC1A4-201ENST00000234256 GIGYF2Q6Y7W6 1299 aaKnown RBP19.14■□□□□ 0.66
SLC1A4-201ENST00000234256 RRAGAQ7L523 313 aa19.14■□□□□ 0.66
SLC1A4-201ENST00000234256 OTUD6BQ8N6M0 293 aa19.14■□□□□ 0.66
SLC1A4-201ENST00000234256 TDRD7Q8NHU6 1098 aaKnown RBP19.14■□□□□ 0.66
SLC1A4-201ENST00000234256 BBXQ8WY36 941 aaPredicted RBP19.14■□□□□ 0.66
SLC1A4-201ENST00000234256 ZSCAN10Q96SZ4 725 aaPredicted RBP19.14■□□□□ 0.66
SLC1A4-201ENST00000234256 UTP18Q9Y5J1 556 aaKnown RBP eCLIP19.14■□□□□ 0.66
SLC1A4-201ENST00000234256 TNNC1P63316 161 aa19.14■□□□□ 0.65
SLC1A4-201ENST00000234256 CPLX4Q7Z7G2 160 aa19.14■□□□□ 0.65
SLC1A4-201ENST00000234256 C2CD5Q86YS7 1000 aa19.14■□□□□ 0.65
SLC1A4-201ENST00000234256 HDAC9Q9UKV0 1011 aa19.14■□□□□ 0.65
SLC1A4-201ENST00000234256 TUBB4BP68371 445 aa19.14■□□□□ 0.65
SLC1A4-201ENST00000234256 CHRNDQ07001 517 aa19.14■□□□□ 0.65
SLC1A4-201ENST00000234256 ANKRD13CQ8N6S4 541 aa19.14■□□□□ 0.65
SLC1A4-201ENST00000234256 SECISBP2LQ93073 1101 aaKnown RBP19.14■□□□□ 0.65
SLC1A4-201ENST00000234256 PPP2R2CQ9Y2T4 447 aa19.14■□□□□ 0.65
SLC1A4-201ENST00000234256 UNC13BO14795 1591 aa19.14■□□□□ 0.65
SLC1A4-201ENST00000234256 SHROOM2Q13796 1616 aa19.14■□□□□ 0.65
SLC1A4-201ENST00000234256 IGKV5-2P06315 115 aa19.13■□□□□ 0.65
SLC1A4-201ENST00000234256 HARSP12081 509 aaKnown RBP19.13■□□□□ 0.65
SLC1A4-201ENST00000234256 RBM6P78332 1123 aaKnown RBP19.13■□□□□ 0.65
SLC1A4-201ENST00000234256 TRIM14Q14142 442 aa19.13■□□□□ 0.65
SLC1A4-201ENST00000234256 CCDC50Q8IVM0 306 aa19.13■□□□□ 0.65
SLC1A4-201ENST00000234256 UBLCP1Q8WVY7 318 aaPredicted RBP19.13■□□□□ 0.65
SLC1A4-201ENST00000234256 CARMIL3Q8ND23 1372 aa19.13■□□□□ 0.65
SLC1A4-201ENST00000234256 BACH1O14867 736 aa19.13■□□□□ 0.65
SLC1A4-201ENST00000234256 KRT25Q7Z3Z0 450 aa19.13■□□□□ 0.65
SLC1A4-201ENST00000234256 KLHL7Q8IXQ5 586 aa19.13■□□□□ 0.65
SLC1A4-201ENST00000234256 OR8K1Q8NGG5 319 aa19.13■□□□□ 0.65
SLC1A4-201ENST00000234256 ZDHHC9Q9Y397 364 aa19.13■□□□□ 0.65
SLC1A4-201ENST00000234256 ARID5BQ14865 1188 aa19.13■□□□□ 0.65
SLC1A4-201ENST00000234256 CALCRLQ16602 461 aa19.13■□□□□ 0.65
SLC1A4-201ENST00000234256 ERBB3P21860 1342 aa19.13■□□□□ 0.65
SLC1A4-201ENST00000234256 TECP42680 631 aa19.13■□□□□ 0.65
SLC1A4-201ENST00000234256 GTF2IP78347 998 aa19.13■□□□□ 0.65
SLC1A4-201ENST00000234256 GSTA5Q7RTV2 222 aa19.13■□□□□ 0.65
SLC1A4-201ENST00000234256 LINC00301Q8NCQ3 95 aa19.13■□□□□ 0.65
SLC1A4-201ENST00000234256 RASGRP4Q8TDF6 673 aa19.13■□□□□ 0.65
SLC1A4-201ENST00000234256 OAS2P29728 719 aaKnown RBP19.12■□□□□ 0.65
SLC1A4-201ENST00000234256 USP37Q86T82 979 aa19.12■□□□□ 0.65
SLC1A4-201ENST00000234256 CPXCR1Q8N123 301 aa19.12■□□□□ 0.65
SLC1A4-201ENST00000234256 RDH13Q8NBN7 331 aa19.12■□□□□ 0.65
SLC1A4-201ENST00000234256 HOMER2Q9NSB8 354 aa19.12■□□□□ 0.65
SLC1A4-201ENST00000234256 UBE3CQ15386 1083 aa19.12■□□□□ 0.65
SLC1A4-201ENST00000234256 MFSD14BQ5SR56 506 aa19.12■□□□□ 0.65
SLC1A4-201ENST00000234256 SND1Q7KZF4 910 aaKnown RBP eCLIP19.12■□□□□ 0.656e-9■■■■□ 22.8
SLC1A4-201ENST00000234256 BLIDQ8IZY5 108 aa19.12■□□□□ 0.65
SLC1A4-201ENST00000234256 EYA3Q99504 573 aa19.12■□□□□ 0.65
SLC1A4-201ENST00000234256 DDX39AO00148 427 aaKnown RBP19.12■□□□□ 0.65
SLC1A4-201ENST00000234256 PTCH1Q13635 1447 aa19.12■□□□□ 0.65
SLC1A4-201ENST00000234256 TET3O43151 1660 aa19.12■□□□□ 0.65
SLC1A4-201ENST00000234256 MAP3K15Q6ZN16 1313 aa19.12■□□□□ 0.65
SLC1A4-201ENST00000234256 CEP104O60308 925 aa19.12■□□□□ 0.65
SLC1A4-201ENST00000234256 ADCY7P51828 1080 aa19.12■□□□□ 0.65
SLC1A4-201ENST00000234256 SLC9C1Q4G0N8 1177 aa19.12■□□□□ 0.65
SLC1A4-201ENST00000234256 KIF2CQ99661 725 aa19.12■□□□□ 0.65
SLC1A4-201ENST00000234256 IKBKGQ9Y6K9 419 aa19.12■□□□□ 0.65
SLC1A4-201ENST00000234256 ATP7BP35670 1465 aa19.11■□□□□ 0.65
SLC1A4-201ENST00000234256 KLRF2D3W0D1 207 aa19.11■□□□□ 0.65
SLC1A4-201ENST00000234256 SYMPKQ92797 1274 aaKnown RBP19.11■□□□□ 0.65
SLC1A4-201ENST00000234256 RASAL2Q9UJF2 1139 aa19.11■□□□□ 0.65
SLC1A4-201ENST00000234256 A0A1W2PQ27 194 aa19.11■□□□□ 0.65
SLC1A4-201ENST00000234256 A0A1W2PQ64 194 aa19.11■□□□□ 0.65
SLC1A4-201ENST00000234256 A0A1W2PQD8 194 aa19.11■□□□□ 0.65
SLC1A4-201ENST00000234256 KCNJ18B7U540 433 aa19.11■□□□□ 0.65
SLC1A4-201ENST00000234256 CFBP00751 764 aa19.11■□□□□ 0.65
SLC1A4-201ENST00000234256 KCNJ12Q14500 433 aa19.11■□□□□ 0.65
SLC1A4-201ENST00000234256 CSRNP2Q9H175 543 aa19.11■□□□□ 0.65
SLC1A4-201ENST00000234256 KIF23Q02241 960 aaPredicted RBP19.1■□□□□ 0.65
SLC1A4-201ENST00000234256 CYP2D7A0A087X1C5 515 aa19.1■□□□□ 0.65
SLC1A4-201ENST00000234256 EPB41P11171 864 aaKnown RBP19.1■□□□□ 0.65
SLC1A4-201ENST00000234256 ATP1A3P13637 1013 aa19.1■□□□□ 0.65
SLC1A4-201ENST00000234256 KLHL30Q0D2K2 578 aa19.1■□□□□ 0.65
SLC1A4-201ENST00000234256 CEP57Q86XR8 500 aa19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms