RNA–Protein interactions for RNA: ENSMUST00000159405.2

Pcdh1-202, Transcript of Protocadherin 1 (Fragment), mousemouse

APPRIS P1 TSL 5 BASIC

Gene Pcdh1, Length 3,880 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1-202ENSMUST00000159405 4930572O03RikQ8C5Y0 211 aa13.77□□□□□ -0.21
Pcdh1-202ENSMUST00000159405 Ccdc14Q8K2J4 934 aa13.77□□□□□ -0.21
Pcdh1-202ENSMUST00000159405 Tsnaxip1Q99P25 704 aa13.77□□□□□ -0.21
Pcdh1-202ENSMUST00000159405 Scrn1Q9CZC8 414 aa13.77□□□□□ -0.21
Pcdh1-202ENSMUST00000159405 Pde3aQ9Z0X4 1141 aa13.77□□□□□ -0.21
Pcdh1-202ENSMUST00000159405 Gm10134F6ZQC6 126 aa13.77□□□□□ -0.21
Pcdh1-202ENSMUST00000159405 Il27raO70394 623 aa13.77□□□□□ -0.21
Pcdh1-202ENSMUST00000159405 Ighmbp2P40694 993 aa13.77□□□□□ -0.21
Pcdh1-202ENSMUST00000159405 Pfkfb2P70265 519 aa13.77□□□□□ -0.21
Pcdh1-202ENSMUST00000159405 Agbl1Q09M05 972 aa13.77□□□□□ -0.21
Pcdh1-202ENSMUST00000159405 CerkQ8K4Q7 531 aa13.77□□□□□ -0.21
Pcdh1-202ENSMUST00000159405 GptQ8QZR5 496 aa13.77□□□□□ -0.21
Pcdh1-202ENSMUST00000159405 Ubxn1Q922Y1 297 aa13.77□□□□□ -0.21
Pcdh1-202ENSMUST00000159405 Thap2Q9D305 217 aa13.77□□□□□ -0.21
Pcdh1-202ENSMUST00000159405 Mst1rQ62190 1378 aa13.77□□□□□ -0.21
Pcdh1-202ENSMUST00000159405 Cnksr1A2A9K7 700 aa13.76□□□□□ -0.21
Pcdh1-202ENSMUST00000159405 Map7d1A2AJI0 846 aa13.76□□□□□ -0.21
Pcdh1-202ENSMUST00000159405 Etnk2A7MCT6 385 aa13.76□□□□□ -0.21
Pcdh1-202ENSMUST00000159405 Taf4bG5E8Z2 855 aa13.76□□□□□ -0.21
Pcdh1-202ENSMUST00000159405 ByslO54825 436 aaKnown RBP13.76□□□□□ -0.21
Pcdh1-202ENSMUST00000159405 Tmod1P49813 359 aa13.76□□□□□ -0.21
Pcdh1-202ENSMUST00000159405 Hspd1P63038 573 aaKnown RBP13.76□□□□□ -0.21
Pcdh1-202ENSMUST00000159405 Stim2P83093 746 aa13.76□□□□□ -0.21
Pcdh1-202ENSMUST00000159405 Nr1d1Q3UV55 615 aa13.76□□□□□ -0.21
Pcdh1-202ENSMUST00000159405 RarsQ9D0I9 660 aaKnown RBP13.76□□□□□ -0.21
Pcdh1-202ENSMUST00000159405 Gm32742A0A1B0GT42 1604 aa13.76□□□□□ -0.21
Pcdh1-202ENSMUST00000159405 Gli2Q0VGT2 1544 aa13.76□□□□□ -0.21
Pcdh1-202ENSMUST00000159405 Tax1bp1Q3UKC1 814 aaKnown RBP13.76□□□□□ -0.21
Pcdh1-202ENSMUST00000159405 Gbp4Q61107 620 aa13.76□□□□□ -0.21
Pcdh1-202ENSMUST00000159405 Ccp110Q7TSH4 1004 aa13.76□□□□□ -0.21
Pcdh1-202ENSMUST00000159405 MaddQ80U28 1577 aa13.76□□□□□ -0.21
Pcdh1-202ENSMUST00000159405 Slain2Q8CI08 581 aa13.76□□□□□ -0.21
Pcdh1-202ENSMUST00000159405 Usp15Q8R5H1 981 aa13.76□□□□□ -0.21
Pcdh1-202ENSMUST00000159405 Abcf2Q99LE6 628 aaKnown RBP13.76□□□□□ -0.21
Pcdh1-202ENSMUST00000159405 Mis18aQ9CZJ6 204 aa13.76□□□□□ -0.21
Pcdh1-202ENSMUST00000159405 Arhgap6O54834 987 aa13.76□□□□□ -0.21
Pcdh1-202ENSMUST00000159405 Timm10P62073 90 aa13.76□□□□□ -0.21
Pcdh1-202ENSMUST00000159405 Ccdc42Q5SV66 316 aa13.76□□□□□ -0.21
Pcdh1-202ENSMUST00000159405 Arhgef1Q61210 920 aaKnown RBP13.76□□□□□ -0.21
Pcdh1-202ENSMUST00000159405 Igbp1Q61249 340 aa13.76□□□□□ -0.21
Pcdh1-202ENSMUST00000159405 Mb21d2Q8C525 428 aa13.76□□□□□ -0.21
Pcdh1-202ENSMUST00000159405 Kcnh5Q920E3 988 aa13.76□□□□□ -0.21
Pcdh1-202ENSMUST00000159405 Atp6v0a4Q920R6 833 aa13.76□□□□□ -0.21
Pcdh1-202ENSMUST00000159405 Efcc1Q9JJF6 558 aa13.76□□□□□ -0.21
Pcdh1-202ENSMUST00000159405 GgcxQ9QYC7 757 aa13.76□□□□□ -0.21
Pcdh1-202ENSMUST00000159405 Tulp1Q9Z273 543 aa13.76□□□□□ -0.21
Pcdh1-202ENSMUST00000159405 Gm28919A0A087WP35 240 aa13.75□□□□□ -0.21
Pcdh1-202ENSMUST00000159405 Hoxb7P09024 217 aa13.75□□□□□ -0.21
Pcdh1-202ENSMUST00000159405 Meis3P97368 378 aa13.75□□□□□ -0.21
Pcdh1-202ENSMUST00000159405 RubcnlQ3TD16 648 aa13.75□□□□□ -0.21
Pcdh1-202ENSMUST00000159405 Cdkl5Q3UTQ8 938 aa13.75□□□□□ -0.21
Pcdh1-202ENSMUST00000159405 Mum1l1Q4VA55 681 aa13.75□□□□□ -0.21
Pcdh1-202ENSMUST00000159405 Ccdc157Q5SPX1 718 aa13.75□□□□□ -0.21
Pcdh1-202ENSMUST00000159405 Kcnj14Q8JZN3 434 aa13.75□□□□□ -0.21
Pcdh1-202ENSMUST00000159405 Dnajc17Q91WT4 303 aa13.75□□□□□ -0.21
Pcdh1-202ENSMUST00000159405 Grin1P35438 938 aa13.75□□□□□ -0.21
Pcdh1-202ENSMUST00000159405 Nlgn1Q99K10 843 aa13.75□□□□□ -0.21
Pcdh1-202ENSMUST00000159405 Smco2Q9DA21 347 aa13.75□□□□□ -0.21
Pcdh1-202ENSMUST00000159405 Sept3Q9Z1S5 350 aa13.75□□□□□ -0.21
Pcdh1-202ENSMUST00000159405 Gm20425E9Q035 978 aaKnown RBP13.75□□□□□ -0.21
Pcdh1-202ENSMUST00000159405 SrprbP47758 269 aa13.75□□□□□ -0.21
Pcdh1-202ENSMUST00000159405 Ankrd13cQ3UX43 541 aa13.75□□□□□ -0.21
Pcdh1-202ENSMUST00000159405 Myl10Q62082 202 aa13.75□□□□□ -0.21
Pcdh1-202ENSMUST00000159405 Asic3Q6X1Y6 530 aa13.75□□□□□ -0.21
Pcdh1-202ENSMUST00000159405 Hook2Q7TMK6 716 aa13.75□□□□□ -0.21
Pcdh1-202ENSMUST00000159405 Atad2Q8CDM1 1040 aa13.75□□□□□ -0.21
Pcdh1-202ENSMUST00000159405 Ccdc80Q8R2G6 949 aa13.75□□□□□ -0.21
Pcdh1-202ENSMUST00000159405 Abt1Q9QYL7 269 aaKnown RBP13.75□□□□□ -0.21
Pcdh1-202ENSMUST00000159405 Cacna2d3Q9Z1L5 1091 aa13.75□□□□□ -0.21
Pcdh1-202ENSMUST00000159405 PtprtQ99M80 1454 aa13.75□□□□□ -0.21
Pcdh1-202ENSMUST00000159405 Rb1P13405 921 aa13.74□□□□□ -0.21
Pcdh1-202ENSMUST00000159405 Zfyve27Q3TXX3 415 aa13.74□□□□□ -0.21
Pcdh1-202ENSMUST00000159405 Prl2c1Q5SVL9 228 aa13.74□□□□□ -0.21
Pcdh1-202ENSMUST00000159405 Prkab2Q6PAM0 271 aa13.74□□□□□ -0.21
Pcdh1-202ENSMUST00000159405 Ccdc50Q810U5 305 aaKnown RBP13.74□□□□□ -0.21
Pcdh1-202ENSMUST00000159405 Tube1Q9D6T1 475 aa13.74□□□□□ -0.21
Pcdh1-202ENSMUST00000159405 Sorbs3Q9R1Z8 733 aa13.74□□□□□ -0.21
Pcdh1-202ENSMUST00000159405 Myo5cE9Q1F5 1742 aa13.74□□□□□ -0.21
Pcdh1-202ENSMUST00000159405 Zfand4D3Z3C6 739 aa13.74□□□□□ -0.21
Pcdh1-202ENSMUST00000159405 Il7P10168 154 aa13.74□□□□□ -0.21
Pcdh1-202ENSMUST00000159405 Atp11aP98197 1187 aa13.74□□□□□ -0.21
Pcdh1-202ENSMUST00000159405 Ccdc129Q14B48 1034 aa13.74□□□□□ -0.21
Pcdh1-202ENSMUST00000159405 Adam1aQ60813 791 aa13.74□□□□□ -0.21
Pcdh1-202ENSMUST00000159405 Irf9Q61179 399 aa13.74□□□□□ -0.21
Pcdh1-202ENSMUST00000159405 Anks1bQ8BIZ1 1259 aa13.74□□□□□ -0.21
Pcdh1-202ENSMUST00000159405 Ddx20Q9JJY4 825 aaKnown RBP13.74□□□□□ -0.21
Pcdh1-202ENSMUST00000159405 Gm382B1AXN3 1250 aa13.74□□□□□ -0.21
Pcdh1-202ENSMUST00000159405 Exosc10P56960 887 aaKnown RBP13.74□□□□□ -0.21
Pcdh1-202ENSMUST00000159405 Adora1Q60612 326 aa13.74□□□□□ -0.21
Pcdh1-202ENSMUST00000159405 Cnga2Q62398 664 aa13.74□□□□□ -0.21
Pcdh1-202ENSMUST00000159405 Klra3Q64329 266 aa13.74□□□□□ -0.21
Pcdh1-202ENSMUST00000159405 Krt42Q6IFX2 452 aa13.74□□□□□ -0.21
Pcdh1-202ENSMUST00000159405 Trim56Q80VI1 734 aaKnown RBP13.74□□□□□ -0.21
Pcdh1-202ENSMUST00000159405 Ublcp1Q8BGR9 318 aa13.74□□□□□ -0.21
Pcdh1-202ENSMUST00000159405 Acbd3Q8BMP6 525 aa13.74□□□□□ -0.21
Pcdh1-202ENSMUST00000159405 Pex19Q8VCI5 299 aa13.74□□□□□ -0.21
Pcdh1-202ENSMUST00000159405 Mfap3Q922T2 349 aa13.74□□□□□ -0.21
Pcdh1-202ENSMUST00000159405 Krt23Q99PS0 422 aa13.74□□□□□ -0.21
Pcdh1-202ENSMUST00000159405 Plekho1Q9JIY0 408 aa13.74□□□□□ -0.21
Pcdh1-202ENSMUST00000159405 Igsf1Q7TQA1 1317 aa13.73□□□□□ -0.21
Retrieved 100 of 22,080 RNA–protein pairs in 294.2 ms