RNA–Protein interactions for RNA: ENSMUST00000088349.2

Col9a1-202, Transcript of Collagen alpha-1(IX) chain, mousemouse

TSL 1 (best) BASIC

Gene Col9a1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1-202ENSMUST00000088349 Klhl10Q9D5V2 608 aa13.11□□□□□ -0.31
Col9a1-202ENSMUST00000088349 Setdb1O88974 1307 aa13.1□□□□□ -0.31
Col9a1-202ENSMUST00000088349 Speer4dL7N216 212 aa13.1□□□□□ -0.31
Col9a1-202ENSMUST00000088349 IkbkbO88351 757 aa13.1□□□□□ -0.31
Col9a1-202ENSMUST00000088349 Gjb4Q02738 266 aa13.1□□□□□ -0.31
Col9a1-202ENSMUST00000088349 MycbpapQ5SUV2 932 aa13.1□□□□□ -0.31
Col9a1-202ENSMUST00000088349 Ctnna3Q65CL1 895 aa13.1□□□□□ -0.31
Col9a1-202ENSMUST00000088349 HelbQ6NVF4 1074 aa13.1□□□□□ -0.31
Col9a1-202ENSMUST00000088349 Gpt2Q8BGT5 522 aa13.1□□□□□ -0.31
Col9a1-202ENSMUST00000088349 Hpcal4Q8BGZ1 191 aa13.1□□□□□ -0.31
Col9a1-202ENSMUST00000088349 Cep128Q8BI22 1102 aa13.1□□□□□ -0.31
Col9a1-202ENSMUST00000088349 Apol10aQ8CCA5 318 aa13.1□□□□□ -0.31
Col9a1-202ENSMUST00000088349 NsmfQ99NF2 532 aa13.1□□□□□ -0.31
Col9a1-202ENSMUST00000088349 Klhl40Q9D783 621 aa13.1□□□□□ -0.31
Col9a1-202ENSMUST00000088349 Golga5Q9QYE6 729 aa13.1□□□□□ -0.31
Col9a1-202ENSMUST00000088349 Mrc1Q61830 1456 aa13.1□□□□□ -0.31
Col9a1-202ENSMUST00000088349 Krt86P97861 486 aa13.1□□□□□ -0.31
Col9a1-202ENSMUST00000088349 Plekhf1Q3TB82 279 aa13.1□□□□□ -0.31
Col9a1-202ENSMUST00000088349 Cep112Q5PR68 954 aa13.1□□□□□ -0.31
Col9a1-202ENSMUST00000088349 Gga3Q8BMI3 718 aa13.1□□□□□ -0.31
Col9a1-202ENSMUST00000088349 Sgsm1Q8BPQ7 1093 aa13.1□□□□□ -0.31
Col9a1-202ENSMUST00000088349 Hgh1Q8C3I8 393 aa13.1□□□□□ -0.31
Col9a1-202ENSMUST00000088349 Dact1Q8R4A3 778 aa13.1□□□□□ -0.31
Col9a1-202ENSMUST00000088349 Uap1Q91YN5 522 aa13.1□□□□□ -0.31
Col9a1-202ENSMUST00000088349 Smc1bQ920F6 1248 aa13.1□□□□□ -0.31
Col9a1-202ENSMUST00000088349 Dbndd1Q9CZ00 160 aa13.1□□□□□ -0.31
Col9a1-202ENSMUST00000088349 Celf1P28659 486 aaKnown RBP13.09□□□□□ -0.31
Col9a1-202ENSMUST00000088349 Snrpa1P57784 255 aaKnown RBP13.09□□□□□ -0.31
Col9a1-202ENSMUST00000088349 Slc38a10Q5I012 1090 aa13.09□□□□□ -0.31
Col9a1-202ENSMUST00000088349 Cdc23Q8BGZ4 597 aa13.09□□□□□ -0.31
Col9a1-202ENSMUST00000088349 Mfap3lQ9D3X9 409 aa13.09□□□□□ -0.31
Col9a1-202ENSMUST00000088349 Cfap45Q9D9U9 551 aa13.09□□□□□ -0.31
Col9a1-202ENSMUST00000088349 Stox1B2RQL2 990 aa13.09□□□□□ -0.31
Col9a1-202ENSMUST00000088349 Cd3dP04235 173 aa13.09□□□□□ -0.31
Col9a1-202ENSMUST00000088349 Abcd1P48410 736 aa13.09□□□□□ -0.31
Col9a1-202ENSMUST00000088349 Ckap2Q3V1H1 664 aa13.09□□□□□ -0.31
Col9a1-202ENSMUST00000088349 Zc3h12cQ5DTV4 884 aa13.09□□□□□ -0.31
Col9a1-202ENSMUST00000088349 Usp50Q6P8X6 390 aa13.09□□□□□ -0.31
Col9a1-202ENSMUST00000088349 Sval3Q76I99 144 aa13.09□□□□□ -0.31
Col9a1-202ENSMUST00000088349 Txndc5Q91W90 417 aa13.09□□□□□ -0.31
Col9a1-202ENSMUST00000088349 Gpr108Q91WD0 569 aa13.09□□□□□ -0.31
Col9a1-202ENSMUST00000088349 Mfap3Q922T2 349 aa13.09□□□□□ -0.31
Col9a1-202ENSMUST00000088349 Bnip3O55003 187 aa13.09□□□□□ -0.31
Col9a1-202ENSMUST00000088349 Spata5Q3UMC0 893 aaKnown RBP13.09□□□□□ -0.31
Col9a1-202ENSMUST00000088349 Ccdc93Q7TQK5 629 aa13.09□□□□□ -0.31
Col9a1-202ENSMUST00000088349 Nup133Q8R0G9 1155 aa13.09□□□□□ -0.31
Col9a1-202ENSMUST00000088349 AmfrQ9R049 643 aa13.09□□□□□ -0.31
Col9a1-202ENSMUST00000088349 Gm43738A0A0G2JEA5 862 aa13.08□□□□□ -0.32
Col9a1-202ENSMUST00000088349 Gm5580A0A0N4SVP8 411 aa13.08□□□□□ -0.32
Col9a1-202ENSMUST00000088349 Zfand4D3Z3C6 739 aa13.08□□□□□ -0.32
Col9a1-202ENSMUST00000088349 Kif3cO35066 796 aa13.08□□□□□ -0.32
Col9a1-202ENSMUST00000088349 Rfc1P35601 1131 aa13.08□□□□□ -0.32
Col9a1-202ENSMUST00000088349 Pth1rP41593 591 aa13.08□□□□□ -0.32
Col9a1-202ENSMUST00000088349 Vsnl1P62761 191 aa13.08□□□□□ -0.32
Col9a1-202ENSMUST00000088349 Lrriq3Q14DL3 633 aa13.08□□□□□ -0.32
Col9a1-202ENSMUST00000088349 Ccp110Q7TSH4 1004 aa13.08□□□□□ -0.32
Col9a1-202ENSMUST00000088349 Dnph1Q80VJ3 173 aa13.08□□□□□ -0.32
Col9a1-202ENSMUST00000088349 Rassf4Q8CB96 322 aa13.08□□□□□ -0.32
Col9a1-202ENSMUST00000088349 Ccdc73Q8CDM4 1066 aa13.08□□□□□ -0.32
Col9a1-202ENSMUST00000088349 Pcdha12Q91Y18 950 aa13.08□□□□□ -0.32
Col9a1-202ENSMUST00000088349 Egfl6Q9JJZ5 550 aa13.08□□□□□ -0.32
Col9a1-202ENSMUST00000088349 Foxo3Q9WVH4 672 aa13.08□□□□□ -0.32
Col9a1-202ENSMUST00000088349 1700029H14RikE9PY36 240 aa13.08□□□□□ -0.32
Col9a1-202ENSMUST00000088349 Gm4340L7N2C4 268 aa13.08□□□□□ -0.32
Col9a1-202ENSMUST00000088349 Pde4dQ01063 747 aa13.08□□□□□ -0.32
Col9a1-202ENSMUST00000088349 Plbd2Q3TCN2 594 aa13.08□□□□□ -0.32
Col9a1-202ENSMUST00000088349 Srp68Q8BMA6 625 aaKnown RBP13.08□□□□□ -0.32
Col9a1-202ENSMUST00000088349 Phldb2Q8K1N2 1249 aa13.08□□□□□ -0.32
Col9a1-202ENSMUST00000088349 Lmbr1Q9JIT0 490 aa13.08□□□□□ -0.32
Col9a1-202ENSMUST00000088349 Irs4Q9Z0Y7 1216 aa13.08□□□□□ -0.32
Col9a1-202ENSMUST00000088349 Abca3Q8R420 1704 aa13.07□□□□□ -0.32
Col9a1-202ENSMUST00000088349 Usp53P15975 1069 aa13.07□□□□□ -0.32
Col9a1-202ENSMUST00000088349 Pola2P33611 600 aa13.07□□□□□ -0.32
Col9a1-202ENSMUST00000088349 Ranbp1P34022 203 aaKnown RBP13.07□□□□□ -0.32
Col9a1-202ENSMUST00000088349 Ces3aQ63880 571 aa13.07□□□□□ -0.32
Col9a1-202ENSMUST00000088349 Cyp4f39Q8BGU0 532 aa13.07□□□□□ -0.32
Col9a1-202ENSMUST00000088349 Phc3Q8CHP6 981 aa13.07□□□□□ -0.32
Col9a1-202ENSMUST00000088349 Ces3bQ8VCU1 571 aa13.07□□□□□ -0.32
Col9a1-202ENSMUST00000088349 Rrp1bQ91YK2 724 aaKnown RBP13.07□□□□□ -0.32
Col9a1-202ENSMUST00000088349 FliiQ9JJ28 1271 aa13.07□□□□□ -0.32
Col9a1-202ENSMUST00000088349 Myh1Q5SX40 1942 aa13.07□□□□□ -0.32
Col9a1-202ENSMUST00000088349 Akap11E9Q777 1895 aa13.07□□□□□ -0.32
Col9a1-202ENSMUST00000088349 Cul4bA2A432 970 aaKnown RBP13.07□□□□□ -0.32
Col9a1-202ENSMUST00000088349 Prr16A3KMN5 304 aa13.07□□□□□ -0.32
Col9a1-202ENSMUST00000088349 Stx8O88983 236 aa13.07□□□□□ -0.32
Col9a1-202ENSMUST00000088349 Chp1P61022 195 aa13.07□□□□□ -0.32
Col9a1-202ENSMUST00000088349 Siah1aP61092 282 aa13.07□□□□□ -0.32
Col9a1-202ENSMUST00000088349 Ppp1r21Q3TDD9 780 aa13.07□□□□□ -0.32
Col9a1-202ENSMUST00000088349 Cfap69Q8BH53 942 aa13.07□□□□□ -0.32
Col9a1-202ENSMUST00000088349 VmacQ8BP01 174 aa13.07□□□□□ -0.32
Col9a1-202ENSMUST00000088349 Triml1Q8BVP1 470 aa13.07□□□□□ -0.32
Col9a1-202ENSMUST00000088349 Rasal3Q8C2K5 1041 aa13.07□□□□□ -0.32
Col9a1-202ENSMUST00000088349 Vps53Q8CCB4 832 aa13.07□□□□□ -0.32
Col9a1-202ENSMUST00000088349 ParvgQ9ERD8 331 aa13.07□□□□□ -0.32
Col9a1-202ENSMUST00000088349 Ssc5dQ8BV57 1371 aa13.07□□□□□ -0.32
Col9a1-202ENSMUST00000088349 Igsf9bE9PZ19 1328 aa13.07□□□□□ -0.32
Col9a1-202ENSMUST00000088349 Palm3A2TJV2 734 aa13.07□□□□□ -0.32
Col9a1-202ENSMUST00000088349 1700013D24RikQ0P521 120 aa13.07□□□□□ -0.32
Col9a1-202ENSMUST00000088349 Mdh1bQ5F204 500 aa13.07□□□□□ -0.32
Col9a1-202ENSMUST00000088349 Il17raQ60943 864 aa13.07□□□□□ -0.32
Retrieved 100 of 22,080 RNA–protein pairs in 69.8 ms