RNA–Protein interactions for RNA: ENSMUST00000055262.12

Vti1b-201, Transcript of Vesicle transport through interaction with t-SNAREs homolog 1B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Vti1b, Length 1,490 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1b-201ENSMUST00000055262 Itgb7P26011 806 aa21.71■■□□□ 1.07
Vti1b-201ENSMUST00000055262 Ftl1P29391 183 aa21.71■■□□□ 1.07
Vti1b-201ENSMUST00000055262 Rc3h1Q4VGL6 1130 aaKnown RBP21.71■■□□□ 1.07
Vti1b-201ENSMUST00000055262 Dcaf15Q6PFH3 600 aa21.71■■□□□ 1.07
Vti1b-201ENSMUST00000055262 Paf1Q8K2T8 535 aa21.71■■□□□ 1.07
Vti1b-201ENSMUST00000055262 Akap8Q9DBR0 687 aaKnown RBP21.71■■□□□ 1.07
Vti1b-201ENSMUST00000055262 Clip2Q9Z0H8 1047 aa21.71■■□□□ 1.07
Vti1b-201ENSMUST00000055262 Mms22lB1AUR6 1238 aa21.71■■□□□ 1.07
Vti1b-201ENSMUST00000055262 Phactr2B1AVP0 632 aa21.71■■□□□ 1.07
Vti1b-201ENSMUST00000055262 Cchcr1Q8K2I2 770 aa21.71■■□□□ 1.07
Vti1b-201ENSMUST00000055262 MsraQ9D6Y7 233 aa21.71■■□□□ 1.07
Vti1b-201ENSMUST00000055262 Prr14lE9Q7C4 1971 aa21.7■■□□□ 1.06
Vti1b-201ENSMUST00000055262 Zmym2Q9CU65 1376 aa21.7■■□□□ 1.06
Vti1b-201ENSMUST00000055262 Rfpl4bJ3QPR6 266 aa21.7■■□□□ 1.06
Vti1b-201ENSMUST00000055262 Pde6aP27664 859 aa21.7■■□□□ 1.06
Vti1b-201ENSMUST00000055262 Acsl1P41216 699 aa21.7■■□□□ 1.06
Vti1b-201ENSMUST00000055262 Nbr1P97432 988 aa21.7■■□□□ 1.06
Vti1b-201ENSMUST00000055262 Cyp4f37Q3V1F1 546 aa21.7■■□□□ 1.06
Vti1b-201ENSMUST00000055262 Eme2Q56A04 373 aa21.7■■□□□ 1.06
Vti1b-201ENSMUST00000055262 Prdm1Q60636 856 aa21.7■■□□□ 1.06
Vti1b-201ENSMUST00000055262 Pip5kl1Q6U7H8 395 aa21.7■■□□□ 1.06
Vti1b-201ENSMUST00000055262 DlatQ8BMF4 642 aa21.7■■□□□ 1.06
Vti1b-201ENSMUST00000055262 OplahQ8K010 1288 aa21.7■■□□□ 1.06
Vti1b-201ENSMUST00000055262 MyocdQ8VIM5 935 aa21.7■■□□□ 1.06
Vti1b-201ENSMUST00000055262 Sema3fO88632 785 aa21.69■■□□□ 1.06
Vti1b-201ENSMUST00000055262 Hoxd11P23813 323 aa21.69■■□□□ 1.06
Vti1b-201ENSMUST00000055262 WasP70315 520 aa21.69■■□□□ 1.06
Vti1b-201ENSMUST00000055262 WaplQ65Z40 1200 aaKnown RBP21.69■■□□□ 1.06
Vti1b-201ENSMUST00000055262 Gba2Q69ZF3 918 aa21.69■■□□□ 1.06
Vti1b-201ENSMUST00000055262 Tceanc2Q8R2M0 207 aa21.69■■□□□ 1.06
Vti1b-201ENSMUST00000055262 Usp53P15975 1069 aa21.68■■□□□ 1.06
Vti1b-201ENSMUST00000055262 Mtx1P47802 317 aa21.68■■□□□ 1.06
Vti1b-201ENSMUST00000055262 Utp18Q5SSI6 552 aaKnown RBP21.68■■□□□ 1.06
Vti1b-201ENSMUST00000055262 Hps6Q8BLY7 805 aa21.68■■□□□ 1.06
Vti1b-201ENSMUST00000055262 Terb1Q8C0V1 768 aa21.68■■□□□ 1.06
Vti1b-201ENSMUST00000055262 Pes1Q9EQ61 584 aaKnown RBP21.68■■□□□ 1.06
Vti1b-201ENSMUST00000055262 Dicer1Q8R418 1916 aa21.68■■□□□ 1.06
Vti1b-201ENSMUST00000055262 TicrrQ8BQ33 1889 aa21.67■■□□□ 1.06
Vti1b-201ENSMUST00000055262 Nmt2O70311 529 aa21.67■■□□□ 1.06
Vti1b-201ENSMUST00000055262 FlgP11088 336 aa21.67■■□□□ 1.06
Vti1b-201ENSMUST00000055262 Sec23aQ01405 765 aa21.67■■□□□ 1.06
Vti1b-201ENSMUST00000055262 Pus7lQ8CE46 702 aa21.67■■□□□ 1.06
Vti1b-201ENSMUST00000055262 Mbtps2Q8CHX6 515 aa21.67■■□□□ 1.06
Vti1b-201ENSMUST00000055262 Mtmr4Q91XS1 1190 aa21.67■■□□□ 1.06
Vti1b-201ENSMUST00000055262 Nudt12Q9DCN1 462 aa21.67■■□□□ 1.06
Vti1b-201ENSMUST00000055262 Atp8b3Q6UQ17 1335 aa21.67■■□□□ 1.06
Vti1b-201ENSMUST00000055262 Prr16A3KMN5 304 aa21.66■■□□□ 1.06
Vti1b-201ENSMUST00000055262 1700006A11RikB9EHI3 544 aa21.66■■□□□ 1.06
Vti1b-201ENSMUST00000055262 NefhP19246 1090 aa21.66■■□□□ 1.06
Vti1b-201ENSMUST00000055262 Ptpn12P35831 775 aa21.66■■□□□ 1.06
Vti1b-201ENSMUST00000055262 EvcP57680 1005 aa21.66■■□□□ 1.06
Vti1b-201ENSMUST00000055262 Mansc4Q3UU94 337 aa21.66■■□□□ 1.06
Vti1b-201ENSMUST00000055262 Gimap3Q99MI6 301 aa21.66■■□□□ 1.06
Vti1b-201ENSMUST00000055262 Eid1Q9DCR4 169 aa21.66■■□□□ 1.06
Vti1b-201ENSMUST00000055262 Pkp1P97350 728 aaKnown RBP21.65■■□□□ 1.06
Vti1b-201ENSMUST00000055262 Zbtb39Q6PDK0 712 aa21.65■■□□□ 1.06
Vti1b-201ENSMUST00000055262 Tacc1Q6Y685 774 aa21.65■■□□□ 1.06
Vti1b-201ENSMUST00000055262 Pms1Q8K119 917 aa21.65■■□□□ 1.06
Vti1b-201ENSMUST00000055262 Ccdc7Q9D541 371 aa21.65■■□□□ 1.06
Vti1b-201ENSMUST00000055262 WtapQ9ER69 396 aa21.65■■□□□ 1.06
Vti1b-201ENSMUST00000055262 Smarce1O54941 411 aaKnown RBP21.64■■□□□ 1.06
Vti1b-201ENSMUST00000055262 Eps15P42567 897 aa21.64■■□□□ 1.06
Vti1b-201ENSMUST00000055262 TbcaP48428 108 aaKnown RBP21.64■■□□□ 1.06
Vti1b-201ENSMUST00000055262 Slc18a1Q8R090 521 aa21.64■■□□□ 1.06
Vti1b-201ENSMUST00000055262 Ttll1Q91V51 423 aa21.64■■□□□ 1.06
Vti1b-201ENSMUST00000055262 Tubb6Q922F4 447 aa21.64■■□□□ 1.06
Vti1b-201ENSMUST00000055262 Prkab1Q9R078 270 aa21.64■■□□□ 1.06
Vti1b-201ENSMUST00000055262 Brca1P48754 1812 aa21.64■■□□□ 1.06
Vti1b-201ENSMUST00000055262 Tbc1d8bA3KGB4 1114 aa21.64■■□□□ 1.05
Vti1b-201ENSMUST00000055262 Ccdc84Q4VA36 332 aaKnown RBP21.64■■□□□ 1.05
Vti1b-201ENSMUST00000055262 LrmpQ60664 539 aa21.64■■□□□ 1.05
Vti1b-201ENSMUST00000055262 Glra4Q61603 456 aa21.64■■□□□ 1.05
Vti1b-201ENSMUST00000055262 Myl10Q62082 202 aa21.64■■□□□ 1.05
Vti1b-201ENSMUST00000055262 Scfd1Q8BRF7 639 aaKnown RBP21.64■■□□□ 1.05
Vti1b-201ENSMUST00000055262 Fsip1Q9D3V5 435 aa21.64■■□□□ 1.05
Vti1b-201ENSMUST00000055262 Trmt112Q9DCG9 125 aa21.64■■□□□ 1.05
Vti1b-201ENSMUST00000055262 Ngly1Q9JI78 651 aa21.64■■□□□ 1.05
Vti1b-201ENSMUST00000055262 Mkrn1Q9QXP6 481 aa21.64■■□□□ 1.05
Vti1b-201ENSMUST00000055262 Lamp1P11438 406 aaKnown RBP21.63■■□□□ 1.05
Vti1b-201ENSMUST00000055262 F2rP30558 430 aa21.63■■□□□ 1.05
Vti1b-201ENSMUST00000055262 Scg2Q03517 617 aa21.63■■□□□ 1.05
Vti1b-201ENSMUST00000055262 Fam83hQ148V8 1209 aa21.63■■□□□ 1.05
Vti1b-201ENSMUST00000055262 Stk11ipQ3TAA7 1072 aa21.63■■□□□ 1.05
Vti1b-201ENSMUST00000055262 Dync1li2Q6PDL0 492 aaKnown RBP21.63■■□□□ 1.05
Vti1b-201ENSMUST00000055262 Bri3bpQ8BXV2 253 aa21.63■■□□□ 1.05
Vti1b-201ENSMUST00000055262 KinQ8K339 391 aa21.63■■□□□ 1.05
Vti1b-201ENSMUST00000055262 Arhgef6Q8K4I3 771 aa21.63■■□□□ 1.05
Vti1b-201ENSMUST00000055262 Nop2Q922K7 793 aaKnown RBP21.63■■□□□ 1.05
Vti1b-201ENSMUST00000055262 Mov10l1Q99MV5 1187 aa21.63■■□□□ 1.05
Vti1b-201ENSMUST00000055262 Cyp27a1Q9DBG1 533 aa21.63■■□□□ 1.05
Vti1b-201ENSMUST00000055262 Clstn1Q9EPL2 979 aa21.63■■□□□ 1.05
Vti1b-201ENSMUST00000055262 Usp14Q9JMA1 493 aaKnown RBP21.63■■□□□ 1.05
Vti1b-201ENSMUST00000055262 Fgfr2P21803 821 aa21.62■■□□□ 1.05
Vti1b-201ENSMUST00000055262 Olfm4Q3UZZ4 505 aa21.62■■□□□ 1.05
Vti1b-201ENSMUST00000055262 9230110C19RikQ8CC70 267 aa21.62■■□□□ 1.05
Vti1b-201ENSMUST00000055262 BrapQ99MP8 591 aa21.62■■□□□ 1.05
Vti1b-201ENSMUST00000055262 Ccdc47Q9D024 483 aaKnown RBP21.62■■□□□ 1.05
Vti1b-201ENSMUST00000055262 Usp5P56399 858 aaKnown RBP21.61■■□□□ 1.05
Vti1b-201ENSMUST00000055262 Mrpl50Q8VDT9 159 aaKnown RBP21.61■■□□□ 1.05
Vti1b-201ENSMUST00000055262 RragcQ99K70 398 aa21.61■■□□□ 1.05
Retrieved 100 of 22,080 RNA–protein pairs in 23.1 ms