RNA–Protein interactions for RNA: ENSMUST00000050178.12

Ccdc60-201, Transcript of Coiled-coil domain-containing protein 60, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc60, Length 3,522 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60-201ENSMUST00000050178 ErfeQ6PGN1 340 aa9.14□□□□□ -0.95
Ccdc60-201ENSMUST00000050178 Gga3Q8BMI3 718 aa9.14□□□□□ -0.95
Ccdc60-201ENSMUST00000050178 Kcnj14Q8JZN3 434 aa9.14□□□□□ -0.95
Ccdc60-201ENSMUST00000050178 Gimap7Q8R379 293 aa9.14□□□□□ -0.95
Ccdc60-201ENSMUST00000050178 Trim11Q99PQ2 467 aa9.14□□□□□ -0.95
Ccdc60-201ENSMUST00000050178 Kcnh3Q9WVJ0 1095 aa9.14□□□□□ -0.95
Ccdc60-201ENSMUST00000050178 Nmt2O70311 529 aa9.14□□□□□ -0.95
Ccdc60-201ENSMUST00000050178 Vcam1P29533 739 aa9.14□□□□□ -0.95
Ccdc60-201ENSMUST00000050178 Fam198bQ3UPI1 517 aa9.14□□□□□ -0.95
Ccdc60-201ENSMUST00000050178 Ehmt1Q5DW34 1296 aa9.14□□□□□ -0.95
Ccdc60-201ENSMUST00000050178 CbarpQ66L44 698 aa9.14□□□□□ -0.95
Ccdc60-201ENSMUST00000050178 Lzts2Q91YU6 671 aa9.14□□□□□ -0.95
Ccdc60-201ENSMUST00000050178 St5Q924W7 1134 aa9.14□□□□□ -0.95
Ccdc60-201ENSMUST00000050178 Styxl1Q9DAR2 321 aa9.14□□□□□ -0.95
Ccdc60-201ENSMUST00000050178 Mkrn1Q9QXP6 481 aa9.14□□□□□ -0.95
Ccdc60-201ENSMUST00000050178 Ktn1Q61595 1327 aaKnown RBP9.14□□□□□ -0.95
Ccdc60-201ENSMUST00000050178 Phldb3E9QAF4 648 aa9.14□□□□□ -0.95
Ccdc60-201ENSMUST00000050178 Cdc37Q61081 379 aa9.14□□□□□ -0.95
Ccdc60-201ENSMUST00000050178 Zdhhc14Q8BQQ1 489 aa9.14□□□□□ -0.95
Ccdc60-201ENSMUST00000050178 LRWD1Q8BUI3 648 aaKnown RBP9.14□□□□□ -0.95
Ccdc60-201ENSMUST00000050178 Ccdc150Q8CDI7 1110 aa9.14□□□□□ -0.95
Ccdc60-201ENSMUST00000050178 Dnaaf4Q8R368 420 aa9.14□□□□□ -0.95
Ccdc60-201ENSMUST00000050178 Slc14a2Q8R4T9 930 aa9.14□□□□□ -0.95
Ccdc60-201ENSMUST00000050178 Nrbp1Q99J45 535 aa9.14□□□□□ -0.95
Ccdc60-201ENSMUST00000050178 Erich6bQ9D4S6 220 aa9.14□□□□□ -0.95
Ccdc60-201ENSMUST00000050178 Usp17lbE9Q9U0 468 aa9.13□□□□□ -0.95
Ccdc60-201ENSMUST00000050178 Gm10134F6ZQC6 126 aa9.13□□□□□ -0.95
Ccdc60-201ENSMUST00000050178 Ppfia3P60469 1194 aa9.13□□□□□ -0.95
Ccdc60-201ENSMUST00000050178 Zkscan4Q5SZT6 480 aa9.13□□□□□ -0.95
Ccdc60-201ENSMUST00000050178 Mmtag2Q99LX5 260 aaKnown RBP9.13□□□□□ -0.95
Ccdc60-201ENSMUST00000050178 Krt23Q99PS0 422 aa9.13□□□□□ -0.95
Ccdc60-201ENSMUST00000050178 Gpaa1Q9WTK3 621 aa9.13□□□□□ -0.95
Ccdc60-201ENSMUST00000050178 Mtmr9Q9Z2D0 545 aa9.13□□□□□ -0.95
Ccdc60-201ENSMUST00000050178 Dhx8A2A4P0 1244 aaKnown RBP9.13□□□□□ -0.95
Ccdc60-201ENSMUST00000050178 Znf667Q2TL60 609 aa9.13□□□□□ -0.95
Ccdc60-201ENSMUST00000050178 Enox1Q8BHR2 643 aaKnown RBP9.13□□□□□ -0.95
Ccdc60-201ENSMUST00000050178 Arid5bQ8BM75 1188 aaKnown RBP9.13□□□□□ -0.95
Ccdc60-201ENSMUST00000050178 Cd2apQ9JLQ0 637 aa9.13□□□□□ -0.95
Ccdc60-201ENSMUST00000050178 Sbf2E9PXF8 1872 aa9.13□□□□□ -0.95
Ccdc60-201ENSMUST00000050178 Col1a1P11087 1453 aa9.13□□□□□ -0.95
Ccdc60-201ENSMUST00000050178 A0A1Y7VML8 143 aa9.13□□□□□ -0.95
Ccdc60-201ENSMUST00000050178 Fam186bD3Z420 943 aa9.13□□□□□ -0.95
Ccdc60-201ENSMUST00000050178 Dapk3O54784 448 aa9.13□□□□□ -0.95
Ccdc60-201ENSMUST00000050178 Mboat4P0C7A3 435 aa9.13□□□□□ -0.95
Ccdc60-201ENSMUST00000050178 Ptgs1P22437 602 aa9.13□□□□□ -0.95
Ccdc60-201ENSMUST00000050178 PparaP23204 468 aa9.13□□□□□ -0.95
Ccdc60-201ENSMUST00000050178 Csrnp2Q8BGQ2 534 aa9.13□□□□□ -0.95
Ccdc60-201ENSMUST00000050178 Tmem60Q8K174 133 aa9.13□□□□□ -0.95
Ccdc60-201ENSMUST00000050178 Hexim1Q8R409 356 aaKnown RBP9.13□□□□□ -0.95
Ccdc60-201ENSMUST00000050178 Apobec3Q99J72 440 aaKnown RBP9.13□□□□□ -0.95
Ccdc60-201ENSMUST00000050178 Txnrd3Q99MD6 652 aa9.13□□□□□ -0.95
Ccdc60-201ENSMUST00000050178 Slc1a4O35874 532 aa9.12□□□□□ -0.95
Ccdc60-201ENSMUST00000050178 Klhdc9Q3USL1 350 aa9.12□□□□□ -0.95
Ccdc60-201ENSMUST00000050178 Trmt2aQ8BNV1 574 aaKnown RBP9.12□□□□□ -0.95
Ccdc60-201ENSMUST00000050178 Pspc1Q8R326 523 aaKnown RBP9.12□□□□□ -0.95
Ccdc60-201ENSMUST00000050178 HibadhQ99L13 335 aaKnown RBP9.12□□□□□ -0.95
Ccdc60-201ENSMUST00000050178 Mettl16Q9CQG2 553 aaKnown RBP9.12□□□□□ -0.95
Ccdc60-201ENSMUST00000050178 Ndufb9Q9CQJ8 179 aa9.12□□□□□ -0.95
Ccdc60-201ENSMUST00000050178 Stxbp4Q9WV89 557 aa9.12□□□□□ -0.95
Ccdc60-201ENSMUST00000050178 Zscan20B2KFW1 1030 aa9.12□□□□□ -0.95
Ccdc60-201ENSMUST00000050178 Vsig10D3YX43 558 aa9.12□□□□□ -0.95
Ccdc60-201ENSMUST00000050178 Wdr78E9PYY5 807 aa9.12□□□□□ -0.95
Ccdc60-201ENSMUST00000050178 DnttP09838 530 aa9.12□□□□□ -0.95
Ccdc60-201ENSMUST00000050178 Tnfaip8l3Q3TBL6 204 aa9.12□□□□□ -0.95
Ccdc60-201ENSMUST00000050178 Prom2Q3UUY6 835 aa9.12□□□□□ -0.95
Ccdc60-201ENSMUST00000050178 Ehd2Q8BH64 543 aa9.12□□□□□ -0.95
Ccdc60-201ENSMUST00000050178 Cep85Q8BMK0 761 aa9.12□□□□□ -0.95
Ccdc60-201ENSMUST00000050178 Ppp1r3gQ9CW07 347 aa9.12□□□□□ -0.95
Ccdc60-201ENSMUST00000050178 Creld2Q9CYA0 350 aa9.12□□□□□ -0.95
Ccdc60-201ENSMUST00000050178 Kmt2eQ3UG20 1868 aa9.12□□□□□ -0.95
Ccdc60-201ENSMUST00000050178 Ulk4Q3V129 1303 aa9.12□□□□□ -0.95
Ccdc60-201ENSMUST00000050178 Myo1aO88329 1043 aa9.11□□□□□ -0.95
Ccdc60-201ENSMUST00000050178 Gja5Q01231 358 aa9.11□□□□□ -0.95
Ccdc60-201ENSMUST00000050178 Cdcp1Q5U462 833 aa9.11□□□□□ -0.95
Ccdc60-201ENSMUST00000050178 Ggt6Q6PDE7 497 aa9.11□□□□□ -0.95
Ccdc60-201ENSMUST00000050178 Dlg1Q811D0 905 aaKnown RBP9.11□□□□□ -0.95
Ccdc60-201ENSMUST00000050178 Rasgrp4Q8BTM9 673 aa9.11□□□□□ -0.95
Ccdc60-201ENSMUST00000050178 Lrrd1Q8C0R9 853 aa9.11□□□□□ -0.95
Ccdc60-201ENSMUST00000050178 Stn1Q8K2X3 378 aa9.11□□□□□ -0.95
Ccdc60-201ENSMUST00000050178 Tmx1Q8VBT0 278 aa9.11□□□□□ -0.95
Ccdc60-201ENSMUST00000050178 Ubac1Q8VDI7 409 aa9.11□□□□□ -0.95
Ccdc60-201ENSMUST00000050178 RarsQ9D0I9 660 aaKnown RBP9.11□□□□□ -0.95
Ccdc60-201ENSMUST00000050178 Ccdc39Q9D5Y1 937 aa9.11□□□□□ -0.95
Ccdc60-201ENSMUST00000050178 Inpp4aQ9EPW0 939 aa9.11□□□□□ -0.95
Ccdc60-201ENSMUST00000050178 FosbP13346 338 aa9.11□□□□□ -0.95
Ccdc60-201ENSMUST00000050178 Nsrp1Q5NCR9 542 aa9.11□□□□□ -0.95
Ccdc60-201ENSMUST00000050178 Scnn1aQ61180 699 aa9.11□□□□□ -0.95
Ccdc60-201ENSMUST00000050178 Pim2Q62070 370 aa9.11□□□□□ -0.95
Ccdc60-201ENSMUST00000050178 Galnt17Q7TT15 598 aa9.11□□□□□ -0.95
Ccdc60-201ENSMUST00000050178 Anks1bQ8BIZ1 1259 aa9.11□□□□□ -0.95
Ccdc60-201ENSMUST00000050178 Ildr1Q8CBR1 537 aa9.11□□□□□ -0.95
Ccdc60-201ENSMUST00000050178 Cdk8Q8R3L8 464 aa9.11□□□□□ -0.95
Ccdc60-201ENSMUST00000050178 Luzp1Q8R4U7 1068 aaKnown RBP9.11□□□□□ -0.95
Ccdc60-201ENSMUST00000050178 Tmem47Q9JJG6 181 aa9.11□□□□□ -0.95
Ccdc60-201ENSMUST00000050178 Irx4Q9QY61 515 aa9.11□□□□□ -0.95
Ccdc60-201ENSMUST00000050178 Flt1P35969 1333 aa9.11□□□□□ -0.95
Ccdc60-201ENSMUST00000050178 Stag2O35638 1231 aa9.11□□□□□ -0.95
Ccdc60-201ENSMUST00000050178 Tnni2P13412 182 aa9.11□□□□□ -0.95
Ccdc60-201ENSMUST00000050178 Panx2Q6IMP4 677 aa9.11□□□□□ -0.95
Ccdc60-201ENSMUST00000050178 Usp49Q6P9L4 685 aa9.11□□□□□ -0.95
Retrieved 100 of 22,080 RNA–protein pairs in 21.1 ms