RNA–Protein interactions for RNA: ENSMUST00000049262.13

Sirpa-201, Transcript of Tyrosine-protein phosphatase non-receptor type substrate 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Sirpa, Length 3,644 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sirpa-201ENSMUST00000049262 Pafah1b1P63005 410 aaKnown RBP12.12□□□□□ -0.47
Sirpa-201ENSMUST00000049262 Kcnd1Q03719 651 aa12.12□□□□□ -0.47
Sirpa-201ENSMUST00000049262 Rnf40Q3U319 1001 aa12.12□□□□□ -0.47
Sirpa-201ENSMUST00000049262 Bbof1Q3V079 533 aa12.12□□□□□ -0.47
Sirpa-201ENSMUST00000049262 Znf697Q569E7 569 aa12.12□□□□□ -0.47
Sirpa-201ENSMUST00000049262 Gngt1Q61012 74 aa12.12□□□□□ -0.47
Sirpa-201ENSMUST00000049262 FntaQ61239 377 aa12.12□□□□□ -0.47
Sirpa-201ENSMUST00000049262 Krt222Q8CCX5 294 aa12.12□□□□□ -0.47
Sirpa-201ENSMUST00000049262 Phc3Q8CHP6 981 aa12.12□□□□□ -0.47
Sirpa-201ENSMUST00000049262 Ccdc14Q8K2J4 934 aa12.12□□□□□ -0.47
Sirpa-201ENSMUST00000049262 Nup133Q8R0G9 1155 aa12.12□□□□□ -0.47
Sirpa-201ENSMUST00000049262 Uap1Q91YN5 522 aa12.12□□□□□ -0.47
Sirpa-201ENSMUST00000049262 Mfap3lQ9D3X9 409 aa12.12□□□□□ -0.47
Sirpa-201ENSMUST00000049262 Popdc2Q9ES82 367 aa12.12□□□□□ -0.47
Sirpa-201ENSMUST00000049262 Myo3bQ1EG27 1305 aa12.12□□□□□ -0.47
Sirpa-201ENSMUST00000049262 FocadA2AKG8 1798 aa12.12□□□□□ -0.47
Sirpa-201ENSMUST00000049262 AK157302I3ITR1 129 aa12.12□□□□□ -0.47
Sirpa-201ENSMUST00000049262 Trim34bJ3QNR8 485 aa12.12□□□□□ -0.47
Sirpa-201ENSMUST00000049262 Myo1aO88329 1043 aa12.12□□□□□ -0.47
Sirpa-201ENSMUST00000049262 IkbkbO88351 757 aa12.12□□□□□ -0.47
Sirpa-201ENSMUST00000049262 SfswapQ3USH5 945 aaKnown RBP12.12□□□□□ -0.47
Sirpa-201ENSMUST00000049262 Tmem232Q5K6N0 675 aa12.12□□□□□ -0.47
Sirpa-201ENSMUST00000049262 Madcam1Q61826 405 aa12.12□□□□□ -0.47
Sirpa-201ENSMUST00000049262 Abtb2Q7TQI7 1024 aa12.12□□□□□ -0.47
Sirpa-201ENSMUST00000049262 Tbc1d5Q80XQ2 815 aa12.12□□□□□ -0.47
Sirpa-201ENSMUST00000049262 Cep128Q8BI22 1102 aa12.12□□□□□ -0.47
Sirpa-201ENSMUST00000049262 Riok1Q922Q2 567 aa12.12□□□□□ -0.47
Sirpa-201ENSMUST00000049262 Isca1Q9D924 129 aa12.12□□□□□ -0.47
Sirpa-201ENSMUST00000049262 Lmbr1Q9JIT0 490 aa12.12□□□□□ -0.47
Sirpa-201ENSMUST00000049262 Cnbd1B1AWM0 430 aa12.12□□□□□ -0.47
Sirpa-201ENSMUST00000049262 Dnajc21E9Q8D0 531 aa12.12□□□□□ -0.47
Sirpa-201ENSMUST00000049262 Ddb1Q3U1J4 1140 aaKnown RBP12.12□□□□□ -0.47
Sirpa-201ENSMUST00000049262 Nek5Q7TSC3 627 aa12.12□□□□□ -0.47
Sirpa-201ENSMUST00000049262 Miga2Q8BK03 593 aa12.12□□□□□ -0.47
Sirpa-201ENSMUST00000049262 Ufl1Q8CCJ3 793 aaKnown RBP12.12□□□□□ -0.47
Sirpa-201ENSMUST00000049262 Sall1Q9ER74 1322 aa12.12□□□□□ -0.47
Sirpa-201ENSMUST00000049262 Akap11E9Q777 1895 aa12.12□□□□□ -0.47
Sirpa-201ENSMUST00000049262 Hspa1lP16627 641 aa12.11□□□□□ -0.47
Sirpa-201ENSMUST00000049262 Casp1P29452 402 aa12.11□□□□□ -0.47
Sirpa-201ENSMUST00000049262 Foxp1P58462 705 aa12.11□□□□□ -0.47
Sirpa-201ENSMUST00000049262 Rufy1Q8BIJ7 712 aa12.11□□□□□ -0.47
Sirpa-201ENSMUST00000049262 NelfbQ8C4Y3 580 aa12.11□□□□□ -0.47
Sirpa-201ENSMUST00000049262 Slc5a4bQ91ZP4 660 aa12.11□□□□□ -0.47
Sirpa-201ENSMUST00000049262 Mfap3Q922T2 349 aa12.11□□□□□ -0.47
Sirpa-201ENSMUST00000049262 Ipo7Q9EPL8 1038 aaKnown RBP12.11□□□□□ -0.47
Sirpa-201ENSMUST00000049262 Gjc1P28229 396 aa12.11□□□□□ -0.47
Sirpa-201ENSMUST00000049262 Meis3P97368 378 aa12.11□□□□□ -0.47
Sirpa-201ENSMUST00000049262 Tcp11Q01755 566 aa12.11□□□□□ -0.47
Sirpa-201ENSMUST00000049262 Gjb4Q02738 266 aa12.11□□□□□ -0.47
Sirpa-201ENSMUST00000049262 Slc7a1Q09143 622 aa12.11□□□□□ -0.47
Sirpa-201ENSMUST00000049262 Zbtb1Q91VL9 713 aa12.11□□□□□ -0.47
Sirpa-201ENSMUST00000049262 Bicdl1A0JNT9 577 aa12.11□□□□□ -0.47
Sirpa-201ENSMUST00000049262 Dennd3A2RT67 1274 aa12.11□□□□□ -0.47
Sirpa-201ENSMUST00000049262 Ccdc96Q9CR92 584 aa12.11□□□□□ -0.47
Sirpa-201ENSMUST00000049262 Uchl5Q9WUP7 329 aa12.11□□□□□ -0.47
Sirpa-201ENSMUST00000049262 BcorQ8CGN4 1759 aa12.1□□□□□ -0.47
Sirpa-201ENSMUST00000049262 Apol7aB2RT54 418 aa12.1□□□□□ -0.47
Sirpa-201ENSMUST00000049262 Zfand4D3Z3C6 739 aa12.1□□□□□ -0.47
Sirpa-201ENSMUST00000049262 ErmardE9Q048 622 aa12.1□□□□□ -0.47
Sirpa-201ENSMUST00000049262 ChkbO55229 394 aa12.1□□□□□ -0.47
Sirpa-201ENSMUST00000049262 Nap1l1P28656 391 aaKnown RBP12.1□□□□□ -0.47
Sirpa-201ENSMUST00000049262 Rad23bP54728 416 aa12.1□□□□□ -0.47
Sirpa-201ENSMUST00000049262 Carmil2Q3V3V9 1296 aa12.1□□□□□ -0.47
Sirpa-201ENSMUST00000049262 Tbx2Q60707 711 aa12.1□□□□□ -0.47
Sirpa-201ENSMUST00000049262 Gja3Q64448 417 aa12.1□□□□□ -0.47
Sirpa-201ENSMUST00000049262 Gnl3lQ6PGG6 577 aaKnown RBP12.1□□□□□ -0.47
Sirpa-201ENSMUST00000049262 Jmjd4Q8BFT6 427 aa12.1□□□□□ -0.47
Sirpa-201ENSMUST00000049262 Vps37cQ8R105 352 aa12.1□□□□□ -0.47
Sirpa-201ENSMUST00000049262 Card14Q99KF0 999 aa12.1□□□□□ -0.47
Sirpa-201ENSMUST00000049262 Cnpy3Q9DAU1 276 aa12.1□□□□□ -0.47
Sirpa-201ENSMUST00000049262 Orc1Q9Z1N2 840 aaKnown RBP12.1□□□□□ -0.47
Sirpa-201ENSMUST00000049262 Uso1Q9Z1Z0 959 aaKnown RBP12.1□□□□□ -0.47
Sirpa-201ENSMUST00000049262 Crb1Q8VHS2 1405 aa12.1□□□□□ -0.47
Sirpa-201ENSMUST00000049262 Med23Q80YQ2 1367 aa12.1□□□□□ -0.47
Sirpa-201ENSMUST00000049262 Ankrd13cQ3UX43 541 aa12.1□□□□□ -0.47
Sirpa-201ENSMUST00000049262 Ankrd23Q812A3 306 aa12.1□□□□□ -0.47
Sirpa-201ENSMUST00000049262 Anks1bQ8BIZ1 1259 aa12.1□□□□□ -0.47
Sirpa-201ENSMUST00000049262 Dnajc17Q91WT4 303 aa12.1□□□□□ -0.47
Sirpa-201ENSMUST00000049262 PpanQ91YU8 470 aaKnown RBP12.1□□□□□ -0.47
Sirpa-201ENSMUST00000049262 Trp53inp1Q9QXE4 239 aa12.1□□□□□ -0.47
Sirpa-201ENSMUST00000049262 Kcnh4A2A5F7 1018 aa12.1□□□□□ -0.47
Sirpa-201ENSMUST00000049262 Cyp26c1B2RXA7 518 aa12.1□□□□□ -0.47
Sirpa-201ENSMUST00000049262 Acad12D3Z7X0 555 aa12.1□□□□□ -0.47
Sirpa-201ENSMUST00000049262 Gfpt1P47856 697 aa12.1□□□□□ -0.47
Sirpa-201ENSMUST00000049262 Fam89aQ14BJ1 175 aa12.1□□□□□ -0.47
Sirpa-201ENSMUST00000049262 Mdh1bQ5F204 500 aa12.1□□□□□ -0.47
Sirpa-201ENSMUST00000049262 Sval3Q76I99 144 aa12.1□□□□□ -0.47
Sirpa-201ENSMUST00000049262 Spag7Q7TNE3 227 aaKnown RBP12.1□□□□□ -0.47
Sirpa-201ENSMUST00000049262 Epn1Q80VP1 575 aa12.1□□□□□ -0.47
Sirpa-201ENSMUST00000049262 Clca2Q8BG22 942 aa12.1□□□□□ -0.47
Sirpa-201ENSMUST00000049262 Adcy3Q8VHH7 1145 aa12.1□□□□□ -0.47
Sirpa-201ENSMUST00000049262 Naaladl2A0A0N4SUJ3 795 aa12.09□□□□□ -0.47
Sirpa-201ENSMUST00000049262 Wnt7aP24383 349 aa12.09□□□□□ -0.47
Sirpa-201ENSMUST00000049262 Nkx2-5P42582 318 aa12.09□□□□□ -0.47
Sirpa-201ENSMUST00000049262 1700013D24RikQ0P521 120 aa12.09□□□□□ -0.47
Sirpa-201ENSMUST00000049262 Slc13a4Q8BZ82 625 aa12.09□□□□□ -0.47
Sirpa-201ENSMUST00000049262 Vps53Q8CCB4 832 aa12.09□□□□□ -0.47
Sirpa-201ENSMUST00000049262 Tulp1Q9Z273 543 aa12.09□□□□□ -0.47
Sirpa-201ENSMUST00000049262 Pak1O88643 545 aa12.09□□□□□ -0.47
Sirpa-201ENSMUST00000049262 Olfr119Q7TRJ5 321 aa12.09□□□□□ -0.47
Retrieved 100 of 22,080 RNA–protein pairs in 14.1 ms