RNA–Protein interactions for RNA: ENSMUST00000223065.1

Trim27-207, Transcript of Zinc finger protein RFP, mousemouse

TSL 1 (best) BASIC

Gene Trim27, Length 2,046 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim27-207ENSMUST00000223065 Gm17416Q30KP4 66 aa10,91□□□□□ -0,66
Trim27-207ENSMUST00000223065 Pla2g10Q9QXX3 151 aa10,9□□□□□ -0,66
Trim27-207ENSMUST00000223065 Gm12216A0A1W2P827 62 aa10,85□□□□□ -0,67
Trim27-207ENSMUST00000223065 Gm17606F6ZL36 78 aa10,75□□□□□ -0,69
Trim27-207ENSMUST00000223065 Gm20537G3UYK7 97 aa10,7□□□□□ -0,7
Trim27-207ENSMUST00000223065 Gm10382Q3V0T5 144 aa10,7□□□□□ -0,7
Trim27-207ENSMUST00000223065 Krtap3-1A2A591 98 aa10,66□□□□□ -0,7
Trim27-207ENSMUST00000223065 Ush2AQ2QI47 5193 aa10,65□□□□□ -0,7
Trim27-207ENSMUST00000223065 2210017I01RikA0A0A6YVV1 95 aa10,63□□□□□ -0,71
Trim27-207ENSMUST00000223065 Gm9955Q8CEJ8 102 aa10,61□□□□□ -0,71
Trim27-207ENSMUST00000223065 Gm20538F6Z9R1 75 aa10,53□□□□□ -0,72
Trim27-207ENSMUST00000223065 Prm1P02319 51 aa10,51□□□□□ -0,73
Trim27-207ENSMUST00000223065 Gm7735D3YX18 52 aa10,49□□□□□ -0,73
Trim27-207ENSMUST00000223065 Gm3880A0A1B0GSB3 72 aa10,46□□□□□ -0,73
Trim27-207ENSMUST00000223065 Ubr4A2AN08 5180 aa10,46□□□□□ -0,74
Trim27-207ENSMUST00000223065 Hmcn2A2AJ76 5100 aa10,46□□□□□ -0,74
Trim27-207ENSMUST00000223065 Sec61bQ9CQS8 96 aaKnown RBP10,45□□□□□ -0,74
Trim27-207ENSMUST00000223065 Gm9789Q8BIG3 52 aa10,44□□□□□ -0,74
Trim27-207ENSMUST00000223065 2310057N15RikQ9D6T8 200 aa10,41□□□□□ -0,74
Trim27-207ENSMUST00000223065 Mp68P56379 58 aa10,39□□□□□ -0,75
Trim27-207ENSMUST00000223065 Krtap13-1Q8K198 168 aa10,38□□□□□ -0,75
Trim27-207ENSMUST00000223065 4932415D10RikA0A1W2P6U8 4986 aa10,38□□□□□ -0,75
Trim27-207ENSMUST00000223065 Romo1P60603 79 aa10,27□□□□□ -0,77
Trim27-207ENSMUST00000223065 BC029722A0A0N4SW31 51 aa10,21□□□□□ -0,78
Trim27-207ENSMUST00000223065 Krtap1-5A2A590 122 aa10,19□□□□□ -0,78
Trim27-207ENSMUST00000223065 Krtap16-3Q8C1I6 86 aa10,09□□□□□ -0,79
Trim27-207ENSMUST00000223065 Fam229aB2KGE5 128 aa10,07□□□□□ -0,8
Trim27-207ENSMUST00000223065 B930094E09RikQ8C4T2 136 aa9,97□□□□□ -0,81
Trim27-207ENSMUST00000223065 Krtap19-1Q925H2 87 aa9,97□□□□□ -0,81
Trim27-207ENSMUST00000223065 Crct1Q6PAI5 102 aa9,97□□□□□ -0,81
Trim27-207ENSMUST00000223065 Gm10318A0A1W2P728 225 aa9,92□□□□□ -0,82
Trim27-207ENSMUST00000223065 Gm17402F6Z0L5 76 aa9,9□□□□□ -0,82
Trim27-207ENSMUST00000223065 Krtap19-3Q925H6 87 aa9,9□□□□□ -0,82
Trim27-207ENSMUST00000223065 Krtap1-3A2A588 173 aa9,9□□□□□ -0,82
Trim27-207ENSMUST00000223065 CriptO70333 101 aa9,86□□□□□ -0,83
Trim27-207ENSMUST00000223065 Gm19426M0QWC7 77 aa9,85□□□□□ -0,83
Trim27-207ENSMUST00000223065 ZanO88799 5376 aa9,84□□□□□ -0,83
Trim27-207ENSMUST00000223065 Gm21887J3QQ04 176 aa9,75□□□□□ -0,85
Trim27-207ENSMUST00000223065 Fat4Q2PZL6 4981 aa9,73□□□□□ -0,85
Trim27-207ENSMUST00000223065 Gm19402J3QJV4 266 aa9,69□□□□□ -0,86
Trim27-207ENSMUST00000223065 Sprr2a3Q4KL71 83 aa9,66□□□□□ -0,86
Trim27-207ENSMUST00000223065 Sprr2a1Q9CQK8 83 aa9,66□□□□□ -0,86
Trim27-207ENSMUST00000223065 LorP18165 486 aa9,66□□□□□ -0,86
Trim27-207ENSMUST00000223065 Spink7Q6IE32 76 aa9,65□□□□□ -0,86
Trim27-207ENSMUST00000223065 Prm2P07978 107 aa9,58□□□□□ -0,88
Trim27-207ENSMUST00000223065 Krtap1-4Q3V2D6 188 aa9,56□□□□□ -0,88
Trim27-207ENSMUST00000223065 Rnf213E9Q555 5152 aaKnown RBP9,55□□□□□ -0,88
Trim27-207ENSMUST00000223065 Ndufaf8A2AMZ4 74 aa9,43□□□□□ -0,9
Trim27-207ENSMUST00000223065 Gm10061D3Z714 54 aa9,27□□□□□ -0,92
Trim27-207ENSMUST00000223065 Lce1jD3YUU5 139 aa9,24□□□□□ -0,93
Trim27-207ENSMUST00000223065 Krtap7-1Q9D3I6 87 aa9,21□□□□□ -0,94
Trim27-207ENSMUST00000223065 Krtap12-1Q9Z287 130 aa9,19□□□□□ -0,94
Trim27-207ENSMUST00000223065 SspoQ8CG65 4998 aa9,14□□□□□ -0,95
Trim27-207ENSMUST00000223065 Krtap19-9aF8WH65 55 aa9,13□□□□□ -0,95
Trim27-207ENSMUST00000223065 Gm40193A0A1B0GT39 78 aa9,12□□□□□ -0,95
Trim27-207ENSMUST00000223065 Camk2n1Q6QWF9 78 aa9,12□□□□□ -0,95
Trim27-207ENSMUST00000223065 Gm19668J3QMD1 248 aa9,11□□□□□ -0,95
Trim27-207ENSMUST00000223065 Gm11569B1AQB1 180 aa9,05□□□□□ -0,96
Trim27-207ENSMUST00000223065 Krtap17-1A2A5X6 109 aa8,85□□□□□ -0,99
Trim27-207ENSMUST00000223065 Gm11562A0PK51 136 aa8,84□□□□□ -0,99
Trim27-207ENSMUST00000223065 Gm9112A2AI92 75 aa8,83□□□□□ -1
Trim27-207ENSMUST00000223065 Krtap4-2B1AQ85 167 aa8,81□□□□□ -1
Trim27-207ENSMUST00000223065 Krtap19-2Q925I0 141 aa8,78□□□□□ -1
Trim27-207ENSMUST00000223065 Krtap9-5A2A5X3 358 aa8,71□□□□□ -1,01
Trim27-207ENSMUST00000223065 Lce1gQ9D195 139 aa8,68□□□□□ -1,02
Trim27-207ENSMUST00000223065 Lce1iQ9D6P5 149 aa8,68□□□□□ -1,02
Trim27-207ENSMUST00000223065 Lce1a2Q9D1K4 149 aa8,59□□□□□ -1,03
Trim27-207ENSMUST00000223065 Krtap8-1O08633 61 aa8,58□□□□□ -1,04
Trim27-207ENSMUST00000223065 Syne2Q6ZWQ0 6874 aaKnown RBP8,55□□□□□ -1,04
Trim27-207ENSMUST00000223065 Tnp1P10856 55 aa8,47□□□□□ -1,05
Trim27-207ENSMUST00000223065 Gm11555B1AQ89 175 aa8,47□□□□□ -1,05
Trim27-207ENSMUST00000223065 Krtap19-9bQ99NG9 58 aa8,47□□□□□ -1,05
Trim27-207ENSMUST00000223065 Muc5bE9Q5I3 4800 aa8,45□□□□□ -1,06
Trim27-207ENSMUST00000223065 Mdn1A2ANY6 5589 aaKnown RBP8,39□□□□□ -1,07
Trim27-207ENSMUST00000223065 Gm11596B1AQB0 205 aa8,38□□□□□ -1,07
Trim27-207ENSMUST00000223065 Krtap4-6Q3V4B7 195 aa8,35□□□□□ -1,07
Trim27-207ENSMUST00000223065 Gm6358A0A087WPH4 74 aa8,26□□□□□ -1,09
Trim27-207ENSMUST00000223065 Krtap4-1Q3UUY3 169 aa8,19□□□□□ -1,1
Trim27-207ENSMUST00000223065 Mt2P02798 61 aa8,17□□□□□ -1,1
Trim27-207ENSMUST00000223065 Krtap9-3Q3V2C1 136 aa8,09□□□□□ -1,11
Trim27-207ENSMUST00000223065 2310046K23RikA0A0A6YVW6 87 aa8,07□□□□□ -1,12
Trim27-207ENSMUST00000223065 Lce1hQ9D6R3 140 aa8,01□□□□□ -1,13
Trim27-207ENSMUST00000223065 Gm11564A2A4L9 201 aa7,98□□□□□ -1,13
Trim27-207ENSMUST00000223065 Gm11563B1AQ90 168 aa7,98□□□□□ -1,13
Trim27-207ENSMUST00000223065 Gm11595B1AQA7 289 aa7,98□□□□□ -1,13
Trim27-207ENSMUST00000223065 Krtap4-8B1AQA8 209 aa7,98□□□□□ -1,13
Trim27-207ENSMUST00000223065 Krtap4-9B1AQA9 244 aa7,76□□□□□ -1,17
Trim27-207ENSMUST00000223065 Fsip2A2ARZ3 6995 aa7,75□□□□□ -1,17
Trim27-207ENSMUST00000223065 Krtap22-2J3QNX6 67 aa7,7□□□□□ -1,18
Trim27-207ENSMUST00000223065 Mt4P47945 62 aa7,67□□□□□ -1,18
Trim27-207ENSMUST00000223065 Krtap4-13Q9D7P3 165 aa7,49□□□□□ -1,21
Trim27-207ENSMUST00000223065 Lce1bQ9D149 137 aa7,35□□□□□ -1,23
Trim27-207ENSMUST00000223065 Gm10272F7CZ33 110 aa7,34□□□□□ -1,23
Trim27-207ENSMUST00000223065 Krtap6-3A0A087WQL6 57 aa7,29□□□□□ -1,24
Trim27-207ENSMUST00000223065 Lce1dQ9D731 133 aa7,28□□□□□ -1,24
Trim27-207ENSMUST00000223065 Gm38119A0A0A6YX29 146 aa7,27□□□□□ -1,25
Trim27-207ENSMUST00000223065 Sprr2kO70562 68 aa7,27□□□□□ -1,25
Trim27-207ENSMUST00000223065 Sprr2gO70558 76 aa7,23□□□□□ -1,25
Trim27-207ENSMUST00000223065 2300003K06RikA2A4M0 262 aa7,22□□□□□ -1,25
Trim27-207ENSMUST00000223065 Sprr2dO70555 85 aa7,15□□□□□ -1,27
Retrieved 100 of 22,080 RNA–protein pairs in 10,1 ms