RNA–Protein interactions for RNA: ENSMUST00000223065.1

Trim27-207, Transcript of Zinc finger protein RFP, mousemouse

TSL 1 (best) BASIC

Gene Trim27, Length 2,046 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim27-207ENSMUST00000223065 Gm17416Q30KP4 66 aa10.91□□□□□ -0.66
Trim27-207ENSMUST00000223065 Pla2g10Q9QXX3 151 aa10.9□□□□□ -0.66
Trim27-207ENSMUST00000223065 Gm12216A0A1W2P827 62 aa10.85□□□□□ -0.67
Trim27-207ENSMUST00000223065 Gm17606F6ZL36 78 aa10.75□□□□□ -0.69
Trim27-207ENSMUST00000223065 Gm20537G3UYK7 97 aa10.7□□□□□ -0.7
Trim27-207ENSMUST00000223065 Gm10382Q3V0T5 144 aa10.7□□□□□ -0.7
Trim27-207ENSMUST00000223065 Krtap3-1A2A591 98 aa10.66□□□□□ -0.7
Trim27-207ENSMUST00000223065 Ush2AQ2QI47 5193 aa10.65□□□□□ -0.7
Trim27-207ENSMUST00000223065 2210017I01RikA0A0A6YVV1 95 aa10.63□□□□□ -0.71
Trim27-207ENSMUST00000223065 Gm9955Q8CEJ8 102 aa10.61□□□□□ -0.71
Trim27-207ENSMUST00000223065 Gm20538F6Z9R1 75 aa10.53□□□□□ -0.72
Trim27-207ENSMUST00000223065 Prm1P02319 51 aa10.51□□□□□ -0.73
Trim27-207ENSMUST00000223065 Gm7735D3YX18 52 aa10.49□□□□□ -0.73
Trim27-207ENSMUST00000223065 Gm3880A0A1B0GSB3 72 aa10.46□□□□□ -0.73
Trim27-207ENSMUST00000223065 Ubr4A2AN08 5180 aa10.46□□□□□ -0.74
Trim27-207ENSMUST00000223065 Hmcn2A2AJ76 5100 aa10.46□□□□□ -0.74
Trim27-207ENSMUST00000223065 Sec61bQ9CQS8 96 aaKnown RBP10.45□□□□□ -0.74
Trim27-207ENSMUST00000223065 Gm9789Q8BIG3 52 aa10.44□□□□□ -0.74
Trim27-207ENSMUST00000223065 2310057N15RikQ9D6T8 200 aa10.41□□□□□ -0.74
Trim27-207ENSMUST00000223065 Mp68P56379 58 aa10.39□□□□□ -0.75
Trim27-207ENSMUST00000223065 Krtap13-1Q8K198 168 aa10.38□□□□□ -0.75
Trim27-207ENSMUST00000223065 4932415D10RikA0A1W2P6U8 4986 aa10.38□□□□□ -0.75
Trim27-207ENSMUST00000223065 Romo1P60603 79 aa10.27□□□□□ -0.77
Trim27-207ENSMUST00000223065 BC029722A0A0N4SW31 51 aa10.21□□□□□ -0.78
Trim27-207ENSMUST00000223065 Krtap1-5A2A590 122 aa10.19□□□□□ -0.78
Trim27-207ENSMUST00000223065 Krtap16-3Q8C1I6 86 aa10.09□□□□□ -0.79
Trim27-207ENSMUST00000223065 Fam229aB2KGE5 128 aa10.07□□□□□ -0.8
Trim27-207ENSMUST00000223065 B930094E09RikQ8C4T2 136 aa9.97□□□□□ -0.81
Trim27-207ENSMUST00000223065 Krtap19-1Q925H2 87 aa9.97□□□□□ -0.81
Trim27-207ENSMUST00000223065 Crct1Q6PAI5 102 aa9.97□□□□□ -0.81
Trim27-207ENSMUST00000223065 Gm10318A0A1W2P728 225 aa9.92□□□□□ -0.82
Trim27-207ENSMUST00000223065 Gm17402F6Z0L5 76 aa9.9□□□□□ -0.82
Trim27-207ENSMUST00000223065 Krtap19-3Q925H6 87 aa9.9□□□□□ -0.82
Trim27-207ENSMUST00000223065 Krtap1-3A2A588 173 aa9.9□□□□□ -0.82
Trim27-207ENSMUST00000223065 CriptO70333 101 aa9.86□□□□□ -0.83
Trim27-207ENSMUST00000223065 Gm19426M0QWC7 77 aa9.85□□□□□ -0.83
Trim27-207ENSMUST00000223065 ZanO88799 5376 aa9.84□□□□□ -0.83
Trim27-207ENSMUST00000223065 Gm21887J3QQ04 176 aa9.75□□□□□ -0.85
Trim27-207ENSMUST00000223065 Fat4Q2PZL6 4981 aa9.73□□□□□ -0.85
Trim27-207ENSMUST00000223065 Gm19402J3QJV4 266 aa9.69□□□□□ -0.86
Trim27-207ENSMUST00000223065 Sprr2a3Q4KL71 83 aa9.66□□□□□ -0.86
Trim27-207ENSMUST00000223065 Sprr2a1Q9CQK8 83 aa9.66□□□□□ -0.86
Trim27-207ENSMUST00000223065 LorP18165 486 aa9.66□□□□□ -0.86
Trim27-207ENSMUST00000223065 Spink7Q6IE32 76 aa9.65□□□□□ -0.86
Trim27-207ENSMUST00000223065 Prm2P07978 107 aa9.58□□□□□ -0.88
Trim27-207ENSMUST00000223065 Krtap1-4Q3V2D6 188 aa9.56□□□□□ -0.88
Trim27-207ENSMUST00000223065 Rnf213E9Q555 5152 aaKnown RBP9.55□□□□□ -0.88
Trim27-207ENSMUST00000223065 Ndufaf8A2AMZ4 74 aa9.43□□□□□ -0.9
Trim27-207ENSMUST00000223065 Gm10061D3Z714 54 aa9.27□□□□□ -0.92
Trim27-207ENSMUST00000223065 Lce1jD3YUU5 139 aa9.24□□□□□ -0.93
Trim27-207ENSMUST00000223065 Krtap7-1Q9D3I6 87 aa9.21□□□□□ -0.94
Trim27-207ENSMUST00000223065 Krtap12-1Q9Z287 130 aa9.19□□□□□ -0.94
Trim27-207ENSMUST00000223065 SspoQ8CG65 4998 aa9.14□□□□□ -0.95
Trim27-207ENSMUST00000223065 Krtap19-9aF8WH65 55 aa9.13□□□□□ -0.95
Trim27-207ENSMUST00000223065 Gm40193A0A1B0GT39 78 aa9.12□□□□□ -0.95
Trim27-207ENSMUST00000223065 Camk2n1Q6QWF9 78 aa9.12□□□□□ -0.95
Trim27-207ENSMUST00000223065 Gm19668J3QMD1 248 aa9.11□□□□□ -0.95
Trim27-207ENSMUST00000223065 Gm11569B1AQB1 180 aa9.05□□□□□ -0.96
Trim27-207ENSMUST00000223065 Krtap17-1A2A5X6 109 aa8.85□□□□□ -0.99
Trim27-207ENSMUST00000223065 Gm11562A0PK51 136 aa8.84□□□□□ -0.99
Trim27-207ENSMUST00000223065 Gm9112A2AI92 75 aa8.83□□□□□ -1
Trim27-207ENSMUST00000223065 Krtap4-2B1AQ85 167 aa8.81□□□□□ -1
Trim27-207ENSMUST00000223065 Krtap19-2Q925I0 141 aa8.78□□□□□ -1
Trim27-207ENSMUST00000223065 Krtap9-5A2A5X3 358 aa8.71□□□□□ -1.01
Trim27-207ENSMUST00000223065 Lce1gQ9D195 139 aa8.68□□□□□ -1.02
Trim27-207ENSMUST00000223065 Lce1iQ9D6P5 149 aa8.68□□□□□ -1.02
Trim27-207ENSMUST00000223065 Lce1a2Q9D1K4 149 aa8.59□□□□□ -1.03
Trim27-207ENSMUST00000223065 Krtap8-1O08633 61 aa8.58□□□□□ -1.04
Trim27-207ENSMUST00000223065 Syne2Q6ZWQ0 6874 aaKnown RBP8.55□□□□□ -1.04
Trim27-207ENSMUST00000223065 Tnp1P10856 55 aa8.47□□□□□ -1.05
Trim27-207ENSMUST00000223065 Gm11555B1AQ89 175 aa8.47□□□□□ -1.05
Trim27-207ENSMUST00000223065 Krtap19-9bQ99NG9 58 aa8.47□□□□□ -1.05
Trim27-207ENSMUST00000223065 Muc5bE9Q5I3 4800 aa8.45□□□□□ -1.06
Trim27-207ENSMUST00000223065 Mdn1A2ANY6 5589 aaKnown RBP8.39□□□□□ -1.07
Trim27-207ENSMUST00000223065 Gm11596B1AQB0 205 aa8.38□□□□□ -1.07
Trim27-207ENSMUST00000223065 Krtap4-6Q3V4B7 195 aa8.35□□□□□ -1.07
Trim27-207ENSMUST00000223065 Gm6358A0A087WPH4 74 aa8.26□□□□□ -1.09
Trim27-207ENSMUST00000223065 Krtap4-1Q3UUY3 169 aa8.19□□□□□ -1.1
Trim27-207ENSMUST00000223065 Mt2P02798 61 aa8.17□□□□□ -1.1
Trim27-207ENSMUST00000223065 Krtap9-3Q3V2C1 136 aa8.09□□□□□ -1.11
Trim27-207ENSMUST00000223065 2310046K23RikA0A0A6YVW6 87 aa8.07□□□□□ -1.12
Trim27-207ENSMUST00000223065 Lce1hQ9D6R3 140 aa8.01□□□□□ -1.13
Trim27-207ENSMUST00000223065 Gm11564A2A4L9 201 aa7.98□□□□□ -1.13
Trim27-207ENSMUST00000223065 Gm11563B1AQ90 168 aa7.98□□□□□ -1.13
Trim27-207ENSMUST00000223065 Gm11595B1AQA7 289 aa7.98□□□□□ -1.13
Trim27-207ENSMUST00000223065 Krtap4-8B1AQA8 209 aa7.98□□□□□ -1.13
Trim27-207ENSMUST00000223065 Krtap4-9B1AQA9 244 aa7.76□□□□□ -1.17
Trim27-207ENSMUST00000223065 Fsip2A2ARZ3 6995 aa7.75□□□□□ -1.17
Trim27-207ENSMUST00000223065 Krtap22-2J3QNX6 67 aa7.7□□□□□ -1.18
Trim27-207ENSMUST00000223065 Mt4P47945 62 aa7.67□□□□□ -1.18
Trim27-207ENSMUST00000223065 Krtap4-13Q9D7P3 165 aa7.49□□□□□ -1.21
Trim27-207ENSMUST00000223065 Lce1bQ9D149 137 aa7.35□□□□□ -1.23
Trim27-207ENSMUST00000223065 Gm10272F7CZ33 110 aa7.34□□□□□ -1.23
Trim27-207ENSMUST00000223065 Krtap6-3A0A087WQL6 57 aa7.29□□□□□ -1.24
Trim27-207ENSMUST00000223065 Lce1dQ9D731 133 aa7.28□□□□□ -1.24
Trim27-207ENSMUST00000223065 Gm38119A0A0A6YX29 146 aa7.27□□□□□ -1.25
Trim27-207ENSMUST00000223065 Sprr2kO70562 68 aa7.27□□□□□ -1.25
Trim27-207ENSMUST00000223065 Sprr2gO70558 76 aa7.23□□□□□ -1.25
Trim27-207ENSMUST00000223065 2300003K06RikA2A4M0 262 aa7.22□□□□□ -1.25
Trim27-207ENSMUST00000223065 Sprr2dO70555 85 aa7.15□□□□□ -1.27
Retrieved 100 of 22,080 RNA–protein pairs in 110 ms